EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019639 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2533 bases
Position: chrKQ557207.1:3885197-3887729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026299	MMR_HSR1	PF01926.23	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026617	-	780	-	ENSXCOP00000026299	259 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019639	-	65	39.766	ENSXCOG00000003913	-	87	39.766
ENSXCOG00000019639	-	73	45.026	ENSXCOG00000008517	-	58	45.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019639	-	94	44.534	ENSACIG00000000741	-	87	44.534	Amphilophus_citrinellus
ENSXCOG00000019639	-	72	48.663	ENSACIG00000015237	-	70	48.663	Amphilophus_citrinellus
ENSXCOG00000019639	-	89	44.304	ENSACIG00000004408	-	82	44.304	Amphilophus_citrinellus
ENSXCOG00000019639	-	88	45.259	ENSACIG00000015616	-	75	46.635	Amphilophus_citrinellus
ENSXCOG00000019639	-	88	43.478	ENSACIG00000004521	-	80	43.478	Amphilophus_citrinellus
ENSXCOG00000019639	-	86	47.788	ENSACIG00000004426	-	76	47.788	Amphilophus_citrinellus
ENSXCOG00000019639	-	81	45.498	ENSACIG00000004501	-	74	45.498	Amphilophus_citrinellus
ENSXCOG00000019639	-	88	44.828	ENSACIG00000015684	-	82	44.828	Amphilophus_citrinellus
ENSXCOG00000019639	-	91	42.259	ENSACIG00000004444	-	84	42.259	Amphilophus_citrinellus
ENSXCOG00000019639	-	93	43.952	ENSAOCG00000002056	-	82	43.952	Amphiprion_ocellaris
ENSXCOG00000019639	-	93	42.387	ENSAPEG00000021053	-	84	42.387	Amphiprion_percula
ENSXCOG00000019639	-	90	48.945	ENSATEG00000002718	-	74	48.945	Anabas_testudineus
ENSXCOG00000019639	-	87	44.493	ENSATEG00000002869	-	81	44.493	Anabas_testudineus
ENSXCOG00000019639	-	80	54.106	ENSACLG00000010292	-	73	54.106	Astatotilapia_calliptera
ENSXCOG00000019639	-	85	45.982	ENSACLG00000016487	-	74	45.982	Astatotilapia_calliptera
ENSXCOG00000019639	-	87	35.526	ENSACLG00000002020	-	82	35.526	Astatotilapia_calliptera
ENSXCOG00000019639	-	95	37.795	ENSACLG00000027615	-	93	37.795	Astatotilapia_calliptera
ENSXCOG00000019639	-	85	54.054	ENSACLG00000018321	-	77	54.054	Astatotilapia_calliptera
ENSXCOG00000019639	-	87	39.565	ENSACLG00000016390	-	87	39.565	Astatotilapia_calliptera
ENSXCOG00000019639	-	86	32.174	ENSAMXG00000037563	-	79	32.174	Astyanax_mexicanus
ENSXCOG00000019639	-	80	42.788	ENSCSEG00000018832	-	76	42.788	Cynoglossus_semilaevis
ENSXCOG00000019639	-	70	51.099	ENSCVAG00000014640	-	84	51.099	Cyprinodon_variegatus
ENSXCOG00000019639	-	81	50.718	ENSCVAG00000016719	-	73	50.718	Cyprinodon_variegatus
ENSXCOG00000019639	-	89	44.068	ENSCVAG00000023166	-	89	44.068	Cyprinodon_variegatus
ENSXCOG00000019639	-	83	40.455	ENSCVAG00000007214	-	85	40.455	Cyprinodon_variegatus
ENSXCOG00000019639	-	72	33.333	ENSDARG00000010729	CABZ01073795.1	64	33.333	Danio_rerio
ENSXCOG00000019639	-	74	31.088	ENSDARG00000075791	si:dkey-79f11.5	60	31.088	Danio_rerio
ENSXCOG00000019639	-	70	32.967	ENSDARG00000092361	si:dkey-79f11.7	76	32.967	Danio_rerio
ENSXCOG00000019639	-	74	30.052	ENSDARG00000092634	CABZ01000634.1	64	30.052	Danio_rerio
ENSXCOG00000019639	-	73	41.053	ENSDARG00000015678	si:dkeyp-75b4.9	89	41.053	Danio_rerio
ENSXCOG00000019639	-	73	33.161	ENSDARG00000095309	si:dkey-79f11.9	68	33.161	Danio_rerio
ENSXCOG00000019639	-	74	30.052	ENSDARG00000093857	si:dkey-79f11.10	59	30.052	Danio_rerio
ENSXCOG00000019639	-	73	35.897	ENSDARG00000029720	si:dkeyp-9d4.2	64	36.410	Danio_rerio
ENSXCOG00000019639	-	74	34.197	ENSDARG00000107486	CR855320.3	64	34.197	Danio_rerio
ENSXCOG00000019639	-	74	33.161	ENSDARG00000095673	si:dkey-79f11.8	58	33.161	Danio_rerio
ENSXCOG00000019639	-	83	41.589	ENSFHEG00000018078	-	77	41.589	Fundulus_heteroclitus
ENSXCOG00000019639	-	80	44.340	ENSFHEG00000019992	-	71	44.340	Fundulus_heteroclitus
ENSXCOG00000019639	-	86	40.789	ENSFHEG00000021105	-	76	40.789	Fundulus_heteroclitus
ENSXCOG00000019639	-	80	44.019	ENSFHEG00000018069	-	70	44.019	Fundulus_heteroclitus
ENSXCOG00000019639	-	79	57.895	ENSGAFG00000019422	-	80	57.895	Gambusia_affinis
ENSXCOG00000019639	-	86	44.737	ENSGACG00000012556	-	72	44.737	Gasterosteus_aculeatus
ENSXCOG00000019639	-	86	44.737	ENSGACG00000001319	-	83	44.737	Gasterosteus_aculeatus
ENSXCOG00000019639	-	86	44.298	ENSGACG00000012548	-	76	44.298	Gasterosteus_aculeatus
ENSXCOG00000019639	-	81	42.991	ENSHBUG00000010945	-	78	42.991	Haplochromis_burtoni
ENSXCOG00000019639	-	76	35.354	ENSIPUG00000007632	-	56	35.354	Ictalurus_punctatus
ENSXCOG00000019639	-	73	37.234	ENSIPUG00000006852	-	58	37.234	Ictalurus_punctatus
ENSXCOG00000019639	-	66	33.898	ENSIPUG00000006725	-	85	33.898	Ictalurus_punctatus
ENSXCOG00000019639	-	77	38.000	ENSIPUG00000005624	-	73	38.000	Ictalurus_punctatus
ENSXCOG00000019639	-	84	41.096	ENSKMAG00000000369	-	80	41.096	Kryptolebias_marmoratus
ENSXCOG00000019639	-	88	39.485	ENSKMAG00000000325	-	82	39.485	Kryptolebias_marmoratus
ENSXCOG00000019639	-	87	42.857	ENSKMAG00000006729	-	85	42.857	Kryptolebias_marmoratus
ENSXCOG00000019639	-	79	49.275	ENSMAMG00000003546	-	68	49.275	Mastacembelus_armatus
ENSXCOG00000019639	-	88	46.725	ENSMAMG00000003570	-	80	46.725	Mastacembelus_armatus
ENSXCOG00000019639	-	95	42.800	ENSMZEG00005008329	-	93	42.800	Maylandia_zebra
ENSXCOG00000019639	-	85	52.252	ENSMZEG00005015498	-	78	52.252	Maylandia_zebra
ENSXCOG00000019639	-	88	43.723	ENSMZEG00005008301	-	86	43.723	Maylandia_zebra
ENSXCOG00000019639	-	93	41.633	ENSNBRG00000020806	-	83	41.633	Neolamprologus_brichardi
ENSXCOG00000019639	-	93	43.802	ENSNBRG00000022075	-	82	43.802	Neolamprologus_brichardi
ENSXCOG00000019639	-	88	42.672	ENSNBRG00000020781	-	92	42.672	Neolamprologus_brichardi
ENSXCOG00000019639	-	88	43.290	ENSNBRG00000006386	-	86	43.290	Neolamprologus_brichardi
ENSXCOG00000019639	-	87	42.982	ENSNBRG00000006414	-	76	42.982	Neolamprologus_brichardi
ENSXCOG00000019639	-	89	50.000	ENSNBRG00000023290	-	79	50.000	Neolamprologus_brichardi
ENSXCOG00000019639	-	85	52.703	ENSNBRG00000024253	-	74	52.703	Neolamprologus_brichardi
ENSXCOG00000019639	-	93	37.705	ENSNBRG00000020744	-	81	37.705	Neolamprologus_brichardi
ENSXCOG00000019639	-	71	44.809	ENSONIG00000013227	-	100	44.809	Oreochromis_niloticus
ENSXCOG00000019639	-	79	42.647	ENSONIG00000017465	-	82	42.647	Oreochromis_niloticus
ENSXCOG00000019639	-	88	44.635	ENSONIG00000015247	-	81	44.635	Oreochromis_niloticus
ENSXCOG00000019639	-	93	44.898	ENSONIG00000015167	-	94	44.898	Oreochromis_niloticus
ENSXCOG00000019639	-	87	40.611	ENSONIG00000012317	-	90	40.611	Oreochromis_niloticus
ENSXCOG00000019639	-	93	41.224	ENSONIG00000012319	-	93	41.224	Oreochromis_niloticus
ENSXCOG00000019639	-	83	40.826	ENSONIG00000016843	-	87	40.826	Oreochromis_niloticus
ENSXCOG00000019639	-	81	49.528	ENSONIG00000018790	-	72	49.528	Oreochromis_niloticus
ENSXCOG00000019639	-	85	45.333	ENSONIG00000015371	-	86	45.333	Oreochromis_niloticus
ENSXCOG00000019639	-	92	36.992	ENSPMGG00000004994	-	83	36.992	Periophthalmus_magnuspinnatus
ENSXCOG00000019639	-	92	39.669	ENSPMGG00000002695	-	91	39.669	Periophthalmus_magnuspinnatus
ENSXCOG00000019639	-	99	41.065	ENSPMGG00000012906	-	92	41.065	Periophthalmus_magnuspinnatus
ENSXCOG00000019639	-	80	42.788	ENSPMGG00000022341	-	61	42.788	Periophthalmus_magnuspinnatus
ENSXCOG00000019639	-	86	43.860	ENSPFOG00000015455	-	75	43.860	Poecilia_formosa
ENSXCOG00000019639	-	82	46.047	ENSPFOG00000003807	-	74	46.047	Poecilia_formosa
ENSXCOG00000019639	-	86	64.035	ENSPFOG00000015382	-	79	64.035	Poecilia_formosa
ENSXCOG00000019639	-	83	87.383	ENSPFOG00000015493	-	72	88.517	Poecilia_formosa
ENSXCOG00000019639	-	90	43.697	ENSPFOG00000003841	-	82	43.154	Poecilia_formosa
ENSXCOG00000019639	-	88	38.197	ENSPLAG00000018274	-	81	38.197	Poecilia_latipinna
ENSXCOG00000019639	-	86	64.035	ENSPMEG00000018635	-	79	64.035	Poecilia_mexicana
ENSXCOG00000019639	-	86	43.421	ENSPMEG00000018626	-	79	43.421	Poecilia_mexicana
ENSXCOG00000019639	-	93	42.857	ENSPREG00000005137	-	80	43.478	Poecilia_reticulata
ENSXCOG00000019639	-	80	55.072	ENSPNYG00000001584	-	73	55.072	Pundamilia_nyererei
ENSXCOG00000019639	-	89	45.378	ENSPNYG00000024019	-	80	45.378	Pundamilia_nyererei
ENSXCOG00000019639	-	92	42.739	ENSPNYG00000005478	-	83	42.739	Pundamilia_nyererei
ENSXCOG00000019639	-	80	34.135	ENSPNAG00000009266	-	76	34.135	Pygocentrus_nattereri
ENSXCOG00000019639	-	80	34.389	ENSPNAG00000006327	-	53	34.389	Pygocentrus_nattereri
ENSXCOG00000019639	-	77	53.000	ENSSDUG00000002417	-	83	50.442	Seriola_dumerili
ENSXCOG00000019639	-	77	53.000	ENSSDUG00000002359	-	83	50.442	Seriola_dumerili
ENSXCOG00000019639	-	93	42.449	ENSSLDG00000016397	-	90	42.449	Seriola_lalandi_dorsalis
ENSXCOG00000019639	-	89	50.862	ENSSLDG00000008952	-	80	50.862	Seriola_lalandi_dorsalis
ENSXCOG00000019639	-	93	43.089	ENSSPAG00000012856	-	86	43.089	Stegastes_partitus
ENSXCOG00000019639	-	86	38.428	ENSSPAG00000012915	-	86	38.428	Stegastes_partitus
ENSXCOG00000019639	-	83	97.664	ENSXMAG00000009971	-	56	97.664	Xiphophorus_maculatus
ENSXCOG00000019639	-	87	65.368	ENSXMAG00000009973	-	82	65.368	Xiphophorus_maculatus
ENSXCOG00000019639	-	86	42.174	ENSXMAG00000029117	-	80	42.174	Xiphophorus_maculatus