EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019652 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 21581 bases
Position: chrKQ557213.1:11081706-11103286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026321	zf-met	PF12874.7	6.2e-24	1	3
ENSXCOP00000026321	zf-met	PF12874.7	6.2e-24	2	3
ENSXCOP00000026321	zf-met	PF12874.7	6.2e-24	3	3
ENSXCOP00000026321	zf-C2H2_jaz	PF12171.8	7.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026640	-	1194	-	ENSXCOP00000026321	397 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019652	-	84	62.429	ENSXCOG00000001430	znf385a	64	80.788
ENSXCOG00000019652	-	97	42.785	ENSXCOG00000007312	znf385d	94	40.831
ENSXCOG00000019652	-	89	38.770	ENSXCOG00000006303	-	91	36.641
ENSXCOG00000019652	-	77	40.694	ENSXCOG00000020124	ZNF385D	100	40.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019652	-	100	60.147	ENSG00000161642	ZNF385A	99	74.444	Homo_sapiens
ENSXCOG00000019652	-	100	63.758	ENSAPOG00000004652	znf385a	96	58.809	Acanthochromis_polyacanthus
ENSXCOG00000019652	-	100	79.720	ENSAPOG00000014982	-	100	82.793	Acanthochromis_polyacanthus
ENSXCOG00000019652	-	87	70.571	ENSACIG00000022862	znf385a	59	80.693	Amphilophus_citrinellus
ENSXCOG00000019652	-	99	82.878	ENSACIG00000001246	ZNF385A	97	83.871	Amphilophus_citrinellus
ENSXCOG00000019652	-	100	75.369	ENSAOCG00000007207	-	99	77.833	Amphiprion_ocellaris
ENSXCOG00000019652	-	100	63.758	ENSAOCG00000021210	znf385a	96	58.809	Amphiprion_ocellaris
ENSXCOG00000019652	-	100	72.182	ENSAPEG00000015869	-	99	75.779	Amphiprion_percula
ENSXCOG00000019652	-	94	85.067	ENSATEG00000001575	ZNF385A	100	83.467	Anabas_testudineus
ENSXCOG00000019652	-	87	58.915	ENSACAG00000007594	ZNF385A	69	79.104	Anolis_carolinensis
ENSXCOG00000019652	-	100	60.391	ENSANAG00000001893	ZNF385A	100	69.298	Aotus_nancymaae
ENSXCOG00000019652	-	100	61.915	ENSACLG00000005163	znf385a	73	80.198	Astatotilapia_calliptera
ENSXCOG00000019652	-	100	80.324	ENSACLG00000000111	-	100	81.944	Astatotilapia_calliptera
ENSXCOG00000019652	-	100	61.614	ENSBTAG00000015604	ZNF385A	100	58.313	Bos_taurus
ENSXCOG00000019652	-	100	60.636	ENSCJAG00000018897	ZNF385A	100	70.175	Callithrix_jacchus
ENSXCOG00000019652	-	99	59.113	ENSCAFG00020020566	ZNF385A	100	58.561	Canis_lupus_dingo
ENSXCOG00000019652	-	99	61.139	ENSCHIG00000016468	ZNF385A	99	58.915	Capra_hircus
ENSXCOG00000019652	-	100	59.902	ENSCPOG00000023870	ZNF385A	100	58.057	Cavia_porcellus
ENSXCOG00000019652	-	99	60.396	ENSCCAG00000033332	ZNF385A	100	69.298	Cebus_capucinus
ENSXCOG00000019652	-	100	60.391	ENSCATG00000035239	ZNF385A	100	69.298	Cercocebus_atys
ENSXCOG00000019652	-	100	60.391	ENSCLAG00000012440	ZNF385A	100	57.074	Chinchilla_lanigera
ENSXCOG00000019652	-	96	56.452	ENSCPBG00000022312	ZNF385A	100	57.480	Chrysemys_picta_bellii
ENSXCOG00000019652	-	100	60.391	ENSCANG00000023978	ZNF385A	100	65.574	Colobus_angolensis_palliatus
ENSXCOG00000019652	-	100	76.235	ENSCSEG00000003390	ZNF385A	100	77.465	Cynoglossus_semilaevis
ENSXCOG00000019652	-	100	61.883	ENSCVAG00000000567	znf385a	73	81.773	Cyprinodon_variegatus
ENSXCOG00000019652	-	100	86.761	ENSCVAG00000001330	-	100	86.761	Cyprinodon_variegatus
ENSXCOG00000019652	-	79	62.069	ENSDNOG00000048978	ZNF385A	83	96.296	Dasypus_novemcinctus
ENSXCOG00000019652	-	100	60.880	ENSECAG00000024939	ZNF385A	100	58.531	Equus_caballus
ENSXCOG00000019652	-	87	71.816	ENSELUG00000015545	ZNF385A	91	69.841	Esox_lucius
ENSXCOG00000019652	-	100	61.125	ENSFCAG00000010154	ZNF385A	100	71.053	Felis_catus
ENSXCOG00000019652	-	100	87.470	ENSFHEG00000013396	-	100	87.848	Fundulus_heteroclitus
ENSXCOG00000019652	-	84	65.982	ENSGMOG00000003386	znf385a	96	66.576	Gadus_morhua
ENSXCOG00000019652	-	62	77.953	ENSGMOG00000015026	-	71	77.953	Gadus_morhua
ENSXCOG00000019652	-	66	54.373	ENSGALG00000046448	ZNF385A	88	51.299	Gallus_gallus
ENSXCOG00000019652	-	100	90.428	ENSGAFG00000021760	-	100	89.924	Gambusia_affinis
ENSXCOG00000019652	-	87	69.774	ENSGAFG00000010277	znf385a	54	81.373	Gambusia_affinis
ENSXCOG00000019652	-	100	82.266	ENSGACG00000000703	ZNF385A	100	79.319	Gasterosteus_aculeatus
ENSXCOG00000019652	-	99	63.810	ENSGACG00000008964	znf385a	100	64.048	Gasterosteus_aculeatus
ENSXCOG00000019652	-	69	60.142	ENSGAGG00000001845	ZNF385A	70	69.163	Gopherus_agassizii
ENSXCOG00000019652	-	98	60.050	ENSGGOG00000002658	ZNF385A	100	69.298	Gorilla_gorilla
ENSXCOG00000019652	-	100	80.093	ENSHBUG00000014839	-	100	81.713	Haplochromis_burtoni
ENSXCOG00000019652	-	100	62.806	ENSHBUG00000004041	znf385a	75	80.198	Haplochromis_burtoni
ENSXCOG00000019652	-	100	59.902	ENSHGLG00000001612	ZNF385A	100	57.908	Heterocephalus_glaber_female
ENSXCOG00000019652	-	94	81.283	ENSHCOG00000003171	ZNF385A	99	80.053	Hippocampus_comes
ENSXCOG00000019652	-	100	63.844	ENSIPUG00000008834	znf385a	81	79.703	Ictalurus_punctatus
ENSXCOG00000019652	-	81	78.846	ENSKMAG00000004707	znf385a	73	81.773	Kryptolebias_marmoratus
ENSXCOG00000019652	-	100	79.206	ENSKMAG00000018980	ZNF385A	100	78.723	Kryptolebias_marmoratus
ENSXCOG00000019652	-	100	78.066	ENSLBEG00000019687	ZNF385A	100	79.294	Labrus_bergylta
ENSXCOG00000019652	-	100	62.252	ENSLBEG00000007732	znf385a	72	82.178	Labrus_bergylta
ENSXCOG00000019652	-	87	56.280	ENSLACG00000003097	ZNF385A	97	71.498	Latimeria_chalumnae
ENSXCOG00000019652	-	100	65.625	ENSLOCG00000007204	znf385a	73	82.353	Lepisosteus_oculatus
ENSXCOG00000019652	-	79	61.300	ENSLAFG00000001583	ZNF385A	97	59.077	Loxodonta_africana
ENSXCOG00000019652	-	100	60.391	ENSMFAG00000042192	ZNF385A	100	69.298	Macaca_fascicularis
ENSXCOG00000019652	-	99	59.705	ENSMMUG00000016669	ZNF385A	100	69.298	Macaca_mulatta
ENSXCOG00000019652	-	100	60.147	ENSMNEG00000039249	ZNF385A	100	69.298	Macaca_nemestrina
ENSXCOG00000019652	-	100	60.391	ENSMLEG00000026475	ZNF385A	100	65.574	Mandrillus_leucophaeus
ENSXCOG00000019652	-	99	82.412	ENSMAMG00000002158	ZNF385A	100	83.166	Mastacembelus_armatus
ENSXCOG00000019652	-	93	67.819	ENSMAMG00000006256	znf385a	97	65.722	Mastacembelus_armatus
ENSXCOG00000019652	-	100	80.324	ENSMZEG00005008223	-	100	81.944	Maylandia_zebra
ENSXCOG00000019652	-	100	62.806	ENSMZEG00005027220	znf385a	75	80.198	Maylandia_zebra
ENSXCOG00000019652	-	98	61.042	ENSMICG00000037401	ZNF385A	100	71.053	Microcebus_murinus
ENSXCOG00000019652	-	99	80.203	ENSMMOG00000021851	-	99	82.741	Mola_mola
ENSXCOG00000019652	-	98	62.670	ENSMMOG00000006777	znf385a	71	80.198	Mola_mola
ENSXCOG00000019652	-	100	78.322	ENSMALG00000014904	-	100	79.953	Monopterus_albus
ENSXCOG00000019652	-	100	59.658	ENSMUSG00000000552	Zfp385a	55	70.936	Mus_musculus
ENSXCOG00000019652	-	100	59.902	MGP_SPRETEiJ_G0021270	Zfp385a	80	70.936	Mus_spretus
ENSXCOG00000019652	-	99	59.850	ENSMLUG00000012937	ZNF385A	92	57.389	Myotis_lucifugus
ENSXCOG00000019652	-	99	77.907	ENSNBRG00000016449	-	97	83.848	Neolamprologus_brichardi
ENSXCOG00000019652	-	96	58.629	ENSNLEG00000017645	ZNF385A	100	67.857	Nomascus_leucogenys
ENSXCOG00000019652	-	53	78.704	ENSONIG00000012107	znf385a	73	80.693	Oreochromis_niloticus
ENSXCOG00000019652	-	100	79.032	ENSONIG00000019097	-	100	81.336	Oreochromis_niloticus
ENSXCOG00000019652	-	78	59.688	ENSOCUG00000010747	ZNF385A	63	70.936	Oryctolagus_cuniculus
ENSXCOG00000019652	-	100	61.247	ENSORLG00000007485	znf385a	73	81.281	Oryzias_latipes
ENSXCOG00000019652	-	98	79.540	ENSORLG00000028647	-	99	79.494	Oryzias_latipes
ENSXCOG00000019652	-	95	61.305	ENSORLG00020008132	znf385a	72	81.281	Oryzias_latipes_hni
ENSXCOG00000019652	-	96	75.122	ENSORLG00020004802	-	92	78.736	Oryzias_latipes_hni
ENSXCOG00000019652	-	100	61.247	ENSORLG00015001095	znf385a	95	68.091	Oryzias_latipes_hsok
ENSXCOG00000019652	-	100	61.247	ENSOMEG00000017817	znf385a	73	80.788	Oryzias_melastigma
ENSXCOG00000019652	-	100	75.943	ENSOMEG00000009018	-	100	76.123	Oryzias_melastigma
ENSXCOG00000019652	-	99	60.644	ENSOGAG00000009483	ZNF385A	92	58.621	Otolemur_garnettii
ENSXCOG00000019652	-	78	61.755	ENSOARG00000016195	ZNF385A	87	57.944	Ovis_aries
ENSXCOG00000019652	-	100	60.391	ENSPPAG00000035416	ZNF385A	100	69.298	Pan_paniscus
ENSXCOG00000019652	-	100	61.125	ENSPPRG00000007378	ZNF385A	100	71.053	Panthera_pardus
ENSXCOG00000019652	-	100	60.391	ENSPTRG00000005039	ZNF385A	100	69.298	Pan_troglodytes
ENSXCOG00000019652	-	100	60.147	ENSPANG00000020165	ZNF385A	100	69.298	Papio_anubis
ENSXCOG00000019652	-	100	52.217	ENSPKIG00000009611	-	79	71.066	Paramormyrops_kingsleyae
ENSXCOG00000019652	-	95	61.340	ENSPCIG00000006724	ZNF385A	55	70.936	Phascolarctos_cinereus
ENSXCOG00000019652	-	100	88.599	ENSPFOG00000010923	ZNF385A	100	88.599	Poecilia_formosa
ENSXCOG00000019652	-	98	92.840	ENSPLAG00000008059	ZNF385A	99	92.840	Poecilia_latipinna
ENSXCOG00000019652	-	100	62.556	ENSPLAG00000020210	znf385a	91	68.258	Poecilia_latipinna
ENSXCOG00000019652	-	100	88.599	ENSPMEG00000002522	ZNF385A	100	88.599	Poecilia_mexicana
ENSXCOG00000019652	-	100	63.596	ENSPMEG00000010287	znf385a	97	68.684	Poecilia_mexicana
ENSXCOG00000019652	-	100	63.252	ENSPREG00000021375	znf385a	82	79.612	Poecilia_reticulata
ENSXCOG00000019652	-	100	86.761	ENSPREG00000016834	ZNF385A	100	86.761	Poecilia_reticulata
ENSXCOG00000019652	-	87	61.798	ENSPCAG00000000899	ZNF385A	100	58.101	Procavia_capensis
ENSXCOG00000019652	-	100	61.125	ENSPCOG00000014689	ZNF385A	100	71.053	Propithecus_coquereli
ENSXCOG00000019652	-	59	64.286	ENSPVAG00000000328	ZNF385A	54	76.667	Pteropus_vampyrus
ENSXCOG00000019652	-	94	82.759	ENSPNYG00000001377	ZNF385A	100	84.085	Pundamilia_nyererei
ENSXCOG00000019652	-	98	61.139	ENSPNYG00000020147	znf385a	75	79.703	Pundamilia_nyererei
ENSXCOG00000019652	-	62	50.988	ENSPNAG00000013499	-	61	54.950	Pygocentrus_nattereri
ENSXCOG00000019652	-	100	60.391	ENSRBIG00000040535	ZNF385A	100	69.298	Rhinopithecus_bieti
ENSXCOG00000019652	-	100	60.391	ENSRROG00000027319	ZNF385A	100	69.298	Rhinopithecus_roxellana
ENSXCOG00000019652	-	100	60.391	ENSSBOG00000030395	ZNF385A	100	69.298	Saimiri_boliviensis_boliviensis
ENSXCOG00000019652	-	100	73.991	ENSSMAG00000002386	-	100	76.180	Scophthalmus_maximus
ENSXCOG00000019652	-	97	61.421	ENSSDUG00000012278	znf385a	97	60.406	Seriola_dumerili
ENSXCOG00000019652	-	93	78.109	ENSSDUG00000006973	-	100	81.864	Seriola_dumerili
ENSXCOG00000019652	-	100	78.140	ENSSLDG00000000605	-	100	81.647	Seriola_lalandi_dorsalis
ENSXCOG00000019652	-	97	70.051	ENSSLDG00000006334	znf385a	98	69.036	Seriola_lalandi_dorsalis
ENSXCOG00000019652	-	100	71.186	ENSSPUG00000010212	ZNF385A	100	66.176	Sphenodon_punctatus
ENSXCOG00000019652	-	95	63.679	ENSSPAG00000006930	znf385a	83	81.683	Stegastes_partitus
ENSXCOG00000019652	-	100	80.420	ENSSPAG00000002733	-	100	82.984	Stegastes_partitus
ENSXCOG00000019652	-	100	60.244	ENSSSCG00000000292	ZNF385A	100	58.252	Sus_scrofa
ENSXCOG00000019652	-	93	78.055	ENSTRUG00000013619	ZNF385A	100	79.551	Takifugu_rubripes
ENSXCOG00000019652	-	99	79.500	ENSTNIG00000014580	ZNF385A	99	80.250	Tetraodon_nigroviridis
ENSXCOG00000019652	-	87	57.062	ENSTTRG00000001650	ZNF385A	74	86.885	Tursiops_truncatus
ENSXCOG00000019652	-	100	60.880	ENSUAMG00000021970	ZNF385A	100	59.005	Ursus_americanus
ENSXCOG00000019652	-	57	61.304	ENSUMAG00000010548	ZNF385A	51	71.942	Ursus_maritimus
ENSXCOG00000019652	-	74	62.963	ENSVVUG00000024384	ZNF385A	80	55.235	Vulpes_vulpes
ENSXCOG00000019652	-	87	58.427	ENSXETG00000021272	znf385a	100	56.583	Xenopus_tropicalis
ENSXCOG00000019652	-	100	91.726	ENSXMAG00000026210	-	100	91.726	Xiphophorus_maculatus
ENSXCOG00000019652	-	100	62.416	ENSXMAG00000028272	znf385a	71	80.788	Xiphophorus_maculatus