EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019654 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: zgc:153215
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 3754 bases
Position: chrKQ557218.1:14162185-14165938
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026322	RRM_1	PF00076.22	3.8e-25	1	2
ENSXCOP00000026322	RRM_1	PF00076.22	3.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026641	-	1461	-	ENSXCOP00000026322	486 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019654	zgc:153215	98	30.059	ENSAPOG00000013963	rbm12b	73	30.059	Acanthochromis_polyacanthus
ENSXCOG00000019654	zgc:153215	95	43.777	ENSAPOG00000008836	zgc:153215	94	45.494	Acanthochromis_polyacanthus
ENSXCOG00000019654	zgc:153215	98	30.097	ENSAMEG00000007134	RBM12B	57	30.097	Ailuropoda_melanoleuca
ENSXCOG00000019654	zgc:153215	97	51.423	ENSACIG00000013317	zgc:153215	99	51.423	Amphilophus_citrinellus
ENSXCOG00000019654	zgc:153215	69	30.499	ENSACIG00000014943	rbm12b	97	30.499	Amphilophus_citrinellus
ENSXCOG00000019654	zgc:153215	98	47.826	ENSAOCG00000010819	zgc:153215	99	47.826	Amphiprion_ocellaris
ENSXCOG00000019654	zgc:153215	98	34.426	ENSAPEG00000022079	rbm12b	99	30.836	Amphiprion_percula
ENSXCOG00000019654	zgc:153215	98	31.262	ENSATEG00000004578	rbm12b	73	32.039	Anabas_testudineus
ENSXCOG00000019654	zgc:153215	98	46.816	ENSATEG00000001886	zgc:153215	99	46.816	Anabas_testudineus
ENSXCOG00000019654	zgc:153215	98	30.134	ENSANAG00000034015	RBM12B	57	30.134	Aotus_nancymaae
ENSXCOG00000019654	zgc:153215	98	50.000	ENSACLG00000007675	zgc:153215	99	50.000	Astatotilapia_calliptera
ENSXCOG00000019654	zgc:153215	84	53.333	ENSAMXG00000020853	zgc:153215	76	53.333	Astyanax_mexicanus
ENSXCOG00000019654	zgc:153215	98	30.291	ENSBTAG00000013408	RBM12B	56	30.291	Bos_taurus
ENSXCOG00000019654	zgc:153215	98	30.214	ENSCHIG00000006790	RBM12B	67	30.214	Capra_hircus
ENSXCOG00000019654	zgc:153215	98	31.589	ENSCAPG00000003543	RBM12B	51	31.589	Cavia_aperea
ENSXCOG00000019654	zgc:153215	98	31.589	ENSCPOG00000007815	RBM12B	51	31.589	Cavia_porcellus
ENSXCOG00000019654	zgc:153215	98	30.134	ENSCLAG00000017617	RBM12B	51	30.134	Chinchilla_lanigera
ENSXCOG00000019654	zgc:153215	98	30.333	ENSCHOG00000008934	RBM12B	51	30.333	Choloepus_hoffmanni
ENSXCOG00000019654	zgc:153215	79	45.663	ENSCSEG00000001575	-	99	45.663	Cynoglossus_semilaevis
ENSXCOG00000019654	zgc:153215	98	30.588	ENSCSEG00000004610	rbm12b	70	30.588	Cynoglossus_semilaevis
ENSXCOG00000019654	zgc:153215	98	52.610	ENSCVAG00000009259	-	99	52.610	Cyprinodon_variegatus
ENSXCOG00000019654	zgc:153215	98	30.137	ENSCVAG00000011047	rbm12b	74	30.966	Cyprinodon_variegatus
ENSXCOG00000019654	zgc:153215	98	35.405	ENSDARG00000055889	zgc:153215	99	35.970	Danio_rerio
ENSXCOG00000019654	zgc:153215	98	31.610	ENSETEG00000013005	-	65	31.610	Echinops_telfairi
ENSXCOG00000019654	zgc:153215	98	38.407	ENSELUG00000009039	zgc:153215	97	38.407	Esox_lucius
ENSXCOG00000019654	zgc:153215	98	30.485	ENSFCAG00000029274	RBM12B	56	30.485	Felis_catus
ENSXCOG00000019654	zgc:153215	98	30.695	ENSFDAG00000005576	RBM12B	50	30.695	Fukomys_damarensis
ENSXCOG00000019654	zgc:153215	99	63.842	ENSFHEG00000014539	zgc:153215	95	63.842	Fundulus_heteroclitus
ENSXCOG00000019654	zgc:153215	98	30.156	ENSFHEG00000016425	rbm12b	73	30.739	Fundulus_heteroclitus
ENSXCOG00000019654	zgc:153215	98	30.545	ENSGMOG00000013467	rbm12b	74	30.545	Gadus_morhua
ENSXCOG00000019654	zgc:153215	97	93.333	ENSGAFG00000007845	zgc:153215	98	93.333	Gambusia_affinis
ENSXCOG00000019654	zgc:153215	98	45.470	ENSHBUG00000016150	zgc:153215	99	45.122	Haplochromis_burtoni
ENSXCOG00000019654	zgc:153215	98	35.196	ENSIPUG00000019731	zgc:153215	99	35.196	Ictalurus_punctatus
ENSXCOG00000019654	zgc:153215	98	30.651	ENSSTOG00000027445	RBM12B	58	30.651	Ictidomys_tridecemlineatus
ENSXCOG00000019654	zgc:153215	98	30.097	ENSKMAG00000013704	rbm12b	71	30.097	Kryptolebias_marmoratus
ENSXCOG00000019654	zgc:153215	98	45.279	ENSKMAG00000004958	zgc:153215	99	45.279	Kryptolebias_marmoratus
ENSXCOG00000019654	zgc:153215	99	52.727	ENSLBEG00000002597	zgc:153215	99	53.333	Labrus_bergylta
ENSXCOG00000019654	zgc:153215	83	51.163	ENSLACG00000007177	RBM12B	75	30.241	Latimeria_chalumnae
ENSXCOG00000019654	zgc:153215	97	31.128	ENSLOCG00000018344	rbm12b	74	31.712	Lepisosteus_oculatus
ENSXCOG00000019654	zgc:153215	98	30.966	ENSLAFG00000029949	RBM12B	57	30.902	Loxodonta_africana
ENSXCOG00000019654	zgc:153215	98	46.263	ENSMAMG00000012038	zgc:153215	99	46.263	Mastacembelus_armatus
ENSXCOG00000019654	zgc:153215	98	32.411	ENSMAMG00000011998	rbm12b	74	32.411	Mastacembelus_armatus
ENSXCOG00000019654	zgc:153215	98	45.565	ENSMZEG00005005435	zgc:153215	99	45.565	Maylandia_zebra
ENSXCOG00000019654	zgc:153215	98	30.309	ENSMAUG00000021752	-	58	30.309	Mesocricetus_auratus
ENSXCOG00000019654	zgc:153215	98	30.604	ENSMICG00000036969	RBM12B	57	30.214	Microcebus_murinus
ENSXCOG00000019654	zgc:153215	89	40.164	ENSMMOG00000002404	rbm12b	70	40.164	Mola_mola
ENSXCOG00000019654	zgc:153215	94	51.111	ENSMMOG00000003372	zgc:153215	99	51.111	Mola_mola
ENSXCOG00000019654	zgc:153215	98	30.058	ENSMODG00000007436	RBM12B	65	30.550	Monodelphis_domestica
ENSXCOG00000019654	zgc:153215	98	50.520	ENSMALG00000001222	zgc:153215	98	50.520	Monopterus_albus
ENSXCOG00000019654	zgc:153215	98	31.558	ENSMALG00000012059	rbm12b	73	31.558	Monopterus_albus
ENSXCOG00000019654	zgc:153215	98	31.179	ENSMUSG00000052137	Rbm12b2	58	31.179	Mus_musculus
ENSXCOG00000019654	zgc:153215	98	31.179	ENSMUSG00000046667	Rbm12b1	58	31.179	Mus_musculus
ENSXCOG00000019654	zgc:153215	98	30.989	MGP_SPRETEiJ_G0026766	-	58	30.989	Mus_spretus
ENSXCOG00000019654	zgc:153215	98	30.989	MGP_SPRETEiJ_G0026765	-	53	30.989	Mus_spretus
ENSXCOG00000019654	zgc:153215	98	30.097	ENSMLUG00000002359	RBM12B	51	30.097	Myotis_lucifugus
ENSXCOG00000019654	zgc:153215	98	30.561	ENSNGAG00000002801	-	52	30.561	Nannospalax_galili
ENSXCOG00000019654	zgc:153215	98	44.599	ENSNBRG00000013644	zgc:153215	99	44.599	Neolamprologus_brichardi
ENSXCOG00000019654	zgc:153215	98	30.038	ENSNLEG00000032050	RBM12B	55	30.038	Nomascus_leucogenys
ENSXCOG00000019654	zgc:153215	98	30.620	ENSODEG00000019204	RBM12B	51	30.620	Octodon_degus
ENSXCOG00000019654	zgc:153215	98	47.692	ENSONIG00000006054	zgc:153215	99	47.692	Oreochromis_niloticus
ENSXCOG00000019654	zgc:153215	99	31.048	ENSOCUG00000010353	RBM12B	57	31.048	Oryctolagus_cuniculus
ENSXCOG00000019654	zgc:153215	98	30.019	ENSORLG00020013619	rbm12b	71	30.019	Oryzias_latipes_hni
ENSXCOG00000019654	zgc:153215	98	30.019	ENSORLG00015019999	rbm12b	71	30.019	Oryzias_latipes_hsok
ENSXCOG00000019654	zgc:153215	98	30.829	ENSOMEG00000022523	rbm12b	72	30.829	Oryzias_melastigma
ENSXCOG00000019654	zgc:153215	98	44.286	ENSOMEG00000004220	zgc:153215	96	44.286	Oryzias_melastigma
ENSXCOG00000019654	zgc:153215	98	30.291	ENSPTIG00000020071	RBM12B	56	30.291	Panthera_tigris_altaica
ENSXCOG00000019654	zgc:153215	98	35.992	ENSPKIG00000014851	zgc:153215	99	35.992	Paramormyrops_kingsleyae
ENSXCOG00000019654	zgc:153215	98	31.641	ENSPKIG00000018719	rbm12b	73	31.641	Paramormyrops_kingsleyae
ENSXCOG00000019654	zgc:153215	98	31.081	ENSPSIG00000001348	RBM12B	72	31.081	Pelodiscus_sinensis
ENSXCOG00000019654	zgc:153215	98	30.174	ENSPCIG00000008556	RBM12B	67	30.667	Phascolarctos_cinereus
ENSXCOG00000019654	zgc:153215	98	92.708	ENSPFOG00000017451	zgc:153215	79	92.708	Poecilia_formosa
ENSXCOG00000019654	zgc:153215	98	75.105	ENSPLAG00000000232	zgc:153215	99	78.870	Poecilia_latipinna
ENSXCOG00000019654	zgc:153215	98	75.891	ENSPMEG00000016662	zgc:153215	99	77.358	Poecilia_mexicana
ENSXCOG00000019654	zgc:153215	98	89.749	ENSPREG00000018608	zgc:153215	99	89.749	Poecilia_reticulata
ENSXCOG00000019654	zgc:153215	98	30.409	ENSPCOG00000023546	RBM12B	55	30.409	Propithecus_coquereli
ENSXCOG00000019654	zgc:153215	99	30.651	ENSPVAG00000011803	RBM12B	53	30.651	Pteropus_vampyrus
ENSXCOG00000019654	zgc:153215	98	45.082	ENSPNYG00000018125	zgc:153215	96	45.082	Pundamilia_nyererei
ENSXCOG00000019654	zgc:153215	98	36.282	ENSPNAG00000025628	zgc:153215	99	36.282	Pygocentrus_nattereri
ENSXCOG00000019654	zgc:153215	98	30.485	ENSPNAG00000008126	rbm12b	72	31.081	Pygocentrus_nattereri
ENSXCOG00000019654	zgc:153215	98	31.226	ENSRNOG00000016330	Rbm12b	57	31.226	Rattus_norvegicus
ENSXCOG00000019654	zgc:153215	98	31.226	ENSRNOG00000055292	LOC679087	65	31.226	Rattus_norvegicus
ENSXCOG00000019654	zgc:153215	98	30.214	ENSRBIG00000035046	RBM12B	63	30.214	Rhinopithecus_bieti
ENSXCOG00000019654	zgc:153215	98	30.097	ENSRROG00000023660	RBM12B	58	30.097	Rhinopithecus_roxellana
ENSXCOG00000019654	zgc:153215	98	30.368	ENSSHAG00000015335	RBM12B	67	30.857	Sarcophilus_harrisii
ENSXCOG00000019654	zgc:153215	99	36.719	ENSSFOG00015009427	zgc:153215	99	36.719	Scleropages_formosus
ENSXCOG00000019654	zgc:153215	98	30.814	ENSSFOG00015001584	rbm12b	74	30.814	Scleropages_formosus
ENSXCOG00000019654	zgc:153215	99	47.117	ENSSMAG00000019013	zgc:153215	97	47.117	Scophthalmus_maximus
ENSXCOG00000019654	zgc:153215	99	49.702	ENSSDUG00000012545	zgc:153215	99	49.702	Seriola_dumerili
ENSXCOG00000019654	zgc:153215	99	44.768	ENSSLDG00000013581	zgc:153215	99	44.768	Seriola_lalandi_dorsalis
ENSXCOG00000019654	zgc:153215	98	31.176	ENSSARG00000011845	-	66	31.176	Sorex_araneus
ENSXCOG00000019654	zgc:153215	98	43.936	ENSSPAG00000023584	zgc:153215	98	43.874	Stegastes_partitus
ENSXCOG00000019654	zgc:153215	98	30.291	ENSSSCG00000006110	RBM12B	56	30.097	Sus_scrofa
ENSXCOG00000019654	zgc:153215	99	30.409	ENSTRUG00000013738	rbm12b	75	30.214	Takifugu_rubripes
ENSXCOG00000019654	zgc:153215	80	45.844	ENSTNIG00000018374	-	99	45.844	Tetraodon_nigroviridis
ENSXCOG00000019654	zgc:153215	98	30.297	ENSTBEG00000000449	RBM12B	62	30.297	Tupaia_belangeri
ENSXCOG00000019654	zgc:153215	98	30.409	ENSUAMG00000023639	RBM12B	55	30.409	Ursus_americanus
ENSXCOG00000019654	zgc:153215	98	30.097	ENSUMAG00000016008	RBM12B	52	30.097	Ursus_maritimus
ENSXCOG00000019654	zgc:153215	99	69.753	ENSXMAG00000013169	-	98	69.753	Xiphophorus_maculatus