EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000019714 (Gene tree)
Gene ID
-
Gene Symbol
atxn1b
Alias
atxn1|atxn1a
Full Name
ataxin 1b
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
2648 bases
Position
chrKQ557218.1:15029905-15032552
Accession
ZDB-GENE-061218-2
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000026409AXHPF08517.121e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000026729-2178-ENSXCOP00000026409725 (aa)--
Gene Model
Click here to download ENSXCOG00000019714's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019714's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000019714atxn1b9840.050ENSXCOG00000020061atxn1a9939.549
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000019714atxn1b9838.785ENSG00000124788ATXN19938.811Homo_sapiens
ENSXCOG00000019714atxn1b9377.778ENSAPOG00000018662atxn1a8877.778Acanthochromis_polyacanthus
ENSXCOG00000019714atxn1b10074.727ENSAPOG00000005003atxn1b10073.876Acanthochromis_polyacanthus
ENSXCOG00000019714atxn1b9839.354ENSAMEG00000004299ATXN19939.474Ailuropoda_melanoleuca
ENSXCOG00000019714atxn1b9839.877ENSACIG00000016088atxn1a9939.379Amphilophus_citrinellus
ENSXCOG00000019714atxn1b10077.016ENSACIG00000014661atxn1b10076.312Amphilophus_citrinellus
ENSXCOG00000019714atxn1b9377.778ENSAOCG00000015796atxn1a8877.778Amphiprion_ocellaris
ENSXCOG00000019714atxn1b10075.274ENSAOCG00000019715atxn1b10074.421Amphiprion_ocellaris
ENSXCOG00000019714atxn1b10075.274ENSAPEG00000022436atxn1b10074.421Amphiprion_percula
ENSXCOG00000019714atxn1b9377.778ENSAPEG00000011313atxn1a8877.778Amphiprion_percula
ENSXCOG00000019714atxn1b9981.790ENSATEG00000002982atxn1b9081.019Anabas_testudineus
ENSXCOG00000019714atxn1b9840.336ENSATEG00000013601atxn1a9940.986Anabas_testudineus
ENSXCOG00000019714atxn1b9839.951ENSACAG00000003919ATXN19939.083Anolis_carolinensis
ENSXCOG00000019714atxn1b8237.371ENSANAG00000025424-9637.389Aotus_nancymaae
ENSXCOG00000019714atxn1b9839.474ENSANAG00000025206-9539.663Aotus_nancymaae
ENSXCOG00000019714atxn1b10080.626ENSACLG00000005697atxn1b9379.881Astatotilapia_calliptera
ENSXCOG00000019714atxn1b9375.556ENSACLG00000015429atxn1a8875.556Astatotilapia_calliptera
ENSXCOG00000019714atxn1b9840.345ENSAMXG00000017432atxn1b9839.701Astyanax_mexicanus
ENSXCOG00000019714atxn1b9841.126ENSAMXG00000042368atxn1a9943.382Astyanax_mexicanus
ENSXCOG00000019714atxn1b9937.515ENSBTAG00000019675ATXN19938.017Bos_taurus
ENSXCOG00000019714atxn1b9839.546ENSCJAG00000006563ATXN19339.256Callithrix_jacchus
ENSXCOG00000019714atxn1b9839.832ENSCAFG00000009934ATXN19939.591Canis_familiaris
ENSXCOG00000019714atxn1b9839.643ENSCAFG00020012647ATXN19539.286Canis_lupus_dingo
ENSXCOG00000019714atxn1b9936.923ENSCHIG00000018697ATXN19938.112Capra_hircus
ENSXCOG00000019714atxn1b6749.338ENSTSYG00000000858ATXN19949.196Carlito_syrichta
ENSXCOG00000019714atxn1b9840.550ENSCAPG00000013095ATXN19940.482Cavia_aperea
ENSXCOG00000019714atxn1b9840.942ENSCPOG00000022869ATXN19940.876Cavia_porcellus
ENSXCOG00000019714atxn1b9839.618ENSCCAG00000018590ATXN19939.568Cebus_capucinus
ENSXCOG00000019714atxn1b9839.001ENSCATG00000042777ATXN19939.068Cercocebus_atys
ENSXCOG00000019714atxn1b9840.145ENSCLAG00000002212ATXN19940.097Chinchilla_lanigera
ENSXCOG00000019714atxn1b9839.094ENSCSAG00000007589ATXN19939.162Chlorocebus_sabaeus
ENSXCOG00000019714atxn1b9840.313ENSCPBG00000022373ATXN19940.408Chrysemys_picta_bellii
ENSXCOG00000019714atxn1b9839.162ENSCANG00000033673ATXN19939.230Colobus_angolensis_palliatus
ENSXCOG00000019714atxn1b9839.643ENSCGRG00001022108Atxn19939.474Cricetulus_griseus_chok1gshd
ENSXCOG00000019714atxn1b9840.024ENSCGRG00000014084Atxn19939.855Cricetulus_griseus_crigri
ENSXCOG00000019714atxn1b9977.196ENSCSEG00000004666atxn1b10071.912Cynoglossus_semilaevis
ENSXCOG00000019714atxn1b9837.133ENSCSEG00000017647atxn1a9938.318Cynoglossus_semilaevis
ENSXCOG00000019714atxn1b10078.890ENSCVAG00000010945atxn1b10077.925Cyprinodon_variegatus
ENSXCOG00000019714atxn1b9839.566ENSCVAG00000023240atxn1a9938.748Cyprinodon_variegatus
ENSXCOG00000019714atxn1b9841.387ENSDARG00000060862atxn1b9941.238Danio_rerio
ENSXCOG00000019714atxn1b9839.733ENSDARG00000061687atxn1a9941.013Danio_rerio
ENSXCOG00000019714atxn1b5448.539ENSDNOG00000048471ATXN18651.531Dasypus_novemcinctus
ENSXCOG00000019714atxn1b9838.397ENSDORG00000005940Atxn19938.452Dipodomys_ordii
ENSXCOG00000019714atxn1b8343.195ENSETEG00000003815ATXN18745.198Echinops_telfairi
ENSXCOG00000019714atxn1b9839.427ENSEASG00005011799ATXN19940.024Equus_asinus_asinus
ENSXCOG00000019714atxn1b9839.452ENSECAG00000009251ATXN19940.024Equus_caballus
ENSXCOG00000019714atxn1b9839.809ENSEEUG00000007120ATXN19939.618Erinaceus_europaeus
ENSXCOG00000019714atxn1b9856.628ENSELUG00000001311atxn1b7756.795Esox_lucius
ENSXCOG00000019714atxn1b9468.627ENSELUG00000003691atxn1a9637.302Esox_lucius
ENSXCOG00000019714atxn1b9839.807ENSFCAG00000011298ATXN19939.661Felis_catus
ENSXCOG00000019714atxn1b9841.176ENSFALG00000013400ATXN19940.456Ficedula_albicollis
ENSXCOG00000019714atxn1b8747.512ENSFDAG00000020905ATXN19938.413Fukomys_damarensis
ENSXCOG00000019714atxn1b9468.627ENSFHEG00000019419atxn1a8868.627Fundulus_heteroclitus
ENSXCOG00000019714atxn1b10078.865ENSFHEG00000017226atxn1b10077.899Fundulus_heteroclitus
ENSXCOG00000019714atxn1b9859.067ENSGMOG00000013508atxn1b9959.298Gadus_morhua
ENSXCOG00000019714atxn1b9841.338ENSGALG00000012709ATXN19941.304Gallus_gallus
ENSXCOG00000019714atxn1b9849.398ENSGAFG00000010544atxn1a9938.462Gambusia_affinis
ENSXCOG00000019714atxn1b10089.379ENSGAFG00000007295atxn1b10090.483Gambusia_affinis
ENSXCOG00000019714atxn1b9871.958ENSGACG00000008747atxn1b9971.298Gasterosteus_aculeatus
ENSXCOG00000019714atxn1b9837.408ENSGACG00000003472atxn1a9938.490Gasterosteus_aculeatus
ENSXCOG00000019714atxn1b9840.361ENSGAGG00000006868ATXN19940.168Gopherus_agassizii
ENSXCOG00000019714atxn1b9839.033ENSGGOG00000004169ATXN19939.100Gorilla_gorilla
ENSXCOG00000019714atxn1b10080.775ENSHBUG00000016081atxn1b9380.030Haplochromis_burtoni
ENSXCOG00000019714atxn1b9375.556ENSHBUG00000002508atxn1a8875.556Haplochromis_burtoni
ENSXCOG00000019714atxn1b9840.826ENSHGLG00000009360ATXN19940.705Heterocephalus_glaber_female
ENSXCOG00000019714atxn1b9840.826ENSHGLG00100003038ATXN19940.705Heterocephalus_glaber_male
ENSXCOG00000019714atxn1b9977.612ENSHCOG00000014835atxn1b9969.922Hippocampus_comes
ENSXCOG00000019714atxn1b8640.838ENSHCOG00000019032atxn1a9540.885Hippocampus_comes
ENSXCOG00000019714atxn1b9843.059ENSIPUG00000002088atxn1b9942.124Ictalurus_punctatus
ENSXCOG00000019714atxn1b9841.227ENSIPUG00000001402atxn19940.613Ictalurus_punctatus
ENSXCOG00000019714atxn1b9841.255ENSSTOG00000025423ATXN19940.700Ictidomys_tridecemlineatus
ENSXCOG00000019714atxn1b9839.566ENSJJAG00000000377Atxn19939.515Jaculus_jaculus
ENSXCOG00000019714atxn1b9560.656ENSKMAG00000007216atxn1a9939.690Kryptolebias_marmoratus
ENSXCOG00000019714atxn1b9982.707ENSKMAG00000013507atxn1b9281.504Kryptolebias_marmoratus
ENSXCOG00000019714atxn1b9840.096ENSLBEG00000024388atxn1a9940.385Labrus_bergylta
ENSXCOG00000019714atxn1b9976.284ENSLBEG00000024264atxn1b10069.886Labrus_bergylta
ENSXCOG00000019714atxn1b9840.145ENSLACG00000005371ATXN19939.346Latimeria_chalumnae
ENSXCOG00000019714atxn1b9571.429ENSLOCG00000002910atxn1a9171.429Lepisosteus_oculatus
ENSXCOG00000019714atxn1b9840.843ENSLAFG00000015231ATXN19940.194Loxodonta_africana
ENSXCOG00000019714atxn1b9938.935ENSMFAG00000032779ATXN19938.975Macaca_fascicularis
ENSXCOG00000019714atxn1b9839.146ENSMMUG00000002940ATXN19939.213Macaca_mulatta
ENSXCOG00000019714atxn1b9938.909ENSMNEG00000036667ATXN19938.949Macaca_nemestrina
ENSXCOG00000019714atxn1b7242.193ENSMLEG00000040480ATXN19740.030Mandrillus_leucophaeus
ENSXCOG00000019714atxn1b9373.333ENSMAMG00000014004atxn1a9940.802Mastacembelus_armatus
ENSXCOG00000019714atxn1b9980.758ENSMAMG00000011503atxn1b9180.758Mastacembelus_armatus
ENSXCOG00000019714atxn1b10080.477ENSMZEG00005015064atxn1b9379.732Maylandia_zebra
ENSXCOG00000019714atxn1b9375.556ENSMZEG00005003602atxn1a8875.556Maylandia_zebra
ENSXCOG00000019714atxn1b9841.276ENSMGAG00000003028ATXN19940.804Meleagris_gallopavo
ENSXCOG00000019714atxn1b9840.241ENSMAUG00000011491Atxn19939.709Mesocricetus_auratus
ENSXCOG00000019714atxn1b9839.260ENSMICG00000011875ATXN19939.157Microcebus_murinus
ENSXCOG00000019714atxn1b9840.264ENSMOCG00000001527Atxn19939.734Microtus_ochrogaster
ENSXCOG00000019714atxn1b9840.072ENSMMOG00000018593atxn1a9940.238Mola_mola
ENSXCOG00000019714atxn1b9976.744ENSMMOG00000002884atxn1b10076.197Mola_mola
ENSXCOG00000019714atxn1b9840.428ENSMODG00000010827ATXN19939.906Monodelphis_domestica
ENSXCOG00000019714atxn1b9880.635ENSMALG00000012137atxn1b9974.733Monopterus_albus
ENSXCOG00000019714atxn1b9840.980ENSMALG00000005209atxn1a9941.226Monopterus_albus
ENSXCOG00000019714atxn1b9840.482MGP_CAROLIEiJ_G0018479Atxn19939.303Mus_caroli
ENSXCOG00000019714atxn1b9840.531ENSMUSG00000046876Atxn19939.471Mus_musculus
ENSXCOG00000019714atxn1b9840.964MGP_PahariEiJ_G0019546Atxn19939.904Mus_pahari
ENSXCOG00000019714atxn1b9840.651MGP_SPRETEiJ_G0019357Atxn19939.711Mus_spretus
ENSXCOG00000019714atxn1b9839.833ENSMPUG00000005398ATXN19939.952Mustela_putorius_furo
ENSXCOG00000019714atxn1b9841.035ENSMLUG00000000896ATXN19940.336Myotis_lucifugus
ENSXCOG00000019714atxn1b9839.855ENSNGAG00000020481Atxn19939.855Nannospalax_galili
ENSXCOG00000019714atxn1b10076.903ENSNBRG00000014776atxn1b10075.697Neolamprologus_brichardi
ENSXCOG00000019714atxn1b9375.556ENSNBRG00000013216atxn1a8875.556Neolamprologus_brichardi
ENSXCOG00000019714atxn1b9839.596ENSNLEG00000001064ATXN19939.665Nomascus_leucogenys
ENSXCOG00000019714atxn1b9839.324ENSMEUG00000014680ATXN19638.802Notamacropus_eugenii
ENSXCOG00000019714atxn1b9839.188ENSOPRG00000004813ATXN19938.869Ochotona_princeps
ENSXCOG00000019714atxn1b9839.423ENSODEG00000006297ATXN19939.663Octodon_degus
ENSXCOG00000019714atxn1b9880.107ENSONIG00000003094atxn1b9979.973Oreochromis_niloticus
ENSXCOG00000019714atxn1b8734.492ENSOANG00000011866ATXN19734.799Ornithorhynchus_anatinus
ENSXCOG00000019714atxn1b9839.759ENSOCUG00000015360ATXN19939.831Oryctolagus_cuniculus
ENSXCOG00000019714atxn1b9838.026ENSORLG00000013003atxn1a9937.927Oryzias_latipes
ENSXCOG00000019714atxn1b10072.189ENSORLG00000008288atxn1b10071.584Oryzias_latipes
ENSXCOG00000019714atxn1b9837.861ENSORLG00020006722atxn1a9937.683Oryzias_latipes_hni
ENSXCOG00000019714atxn1b10071.860ENSORLG00020013514atxn1b10071.256Oryzias_latipes_hni
ENSXCOG00000019714atxn1b9838.101ENSORLG00015014668atxn1a9937.815Oryzias_latipes_hsok
ENSXCOG00000019714atxn1b10072.310ENSORLG00015019876atxn1b10071.947Oryzias_latipes_hsok
ENSXCOG00000019714atxn1b9838.182ENSOMEG00000012883atxn1a9838.950Oryzias_melastigma
ENSXCOG00000019714atxn1b10073.333ENSOMEG00000003259atxn1b10072.848Oryzias_melastigma
ENSXCOG00000019714atxn1b9839.976ENSOGAG00000028623ATXN110039.299Otolemur_garnettii
ENSXCOG00000019714atxn1b7352.941ENSOARG00000012141ATXN18652.941Ovis_aries
ENSXCOG00000019714atxn1b9838.921ENSPPAG00000028993ATXN19938.947Pan_paniscus
ENSXCOG00000019714atxn1b9841.794ENSPPRG00000004547ATXN19940.000Panthera_pardus
ENSXCOG00000019714atxn1b9939.085ENSPTRG00000039250ATXN19939.085Pan_troglodytes
ENSXCOG00000019714atxn1b9938.790ENSPANG00000024249ATXN19938.802Papio_anubis
ENSXCOG00000019714atxn1b9844.538ENSPKIG00000018323atxn1b9944.746Paramormyrops_kingsleyae
ENSXCOG00000019714atxn1b9843.842ENSPKIG00000003054atxn1a9943.860Paramormyrops_kingsleyae
ENSXCOG00000019714atxn1b7937.020ENSPSIG00000007158ATXN19237.327Pelodiscus_sinensis
ENSXCOG00000019714atxn1b8143.219ENSPMGG00000022926atxn1a8247.541Periophthalmus_magnuspinnatus
ENSXCOG00000019714atxn1b9966.045ENSPMGG00000013610atxn1b10066.667Periophthalmus_magnuspinnatus
ENSXCOG00000019714atxn1b9840.000ENSPEMG00000014930Atxn19939.467Peromyscus_maniculatus_bairdii
ENSXCOG00000019714atxn1b9940.828ENSPCIG00000019413ATXN19940.758Phascolarctos_cinereus
ENSXCOG00000019714atxn1b9370.732ENSPFOG00000014422atxn1a8773.333Poecilia_formosa
ENSXCOG00000019714atxn1b9839.689ENSPLAG00000018978atxn1a9940.206Poecilia_latipinna
ENSXCOG00000019714atxn1b10093.931ENSPLAG00000018703atxn1b10093.931Poecilia_latipinna
ENSXCOG00000019714atxn1b10084.970ENSPMEG00000023723atxn1b10084.970Poecilia_mexicana
ENSXCOG00000019714atxn1b9467.925ENSPMEG00000002647atxn1a8867.925Poecilia_mexicana
ENSXCOG00000019714atxn1b10090.751ENSPREG00000020308atxn1b10091.287Poecilia_reticulata
ENSXCOG00000019714atxn1b9368.293ENSPREG00000008333atxn1a9938.778Poecilia_reticulata
ENSXCOG00000019714atxn1b9838.850ENSPPYG00000016254ATXN19938.759Pongo_abelii
ENSXCOG00000019714atxn1b7258.491ENSPCAG00000008196ATXN17158.491Procavia_capensis
ENSXCOG00000019714atxn1b9839.499ENSPCOG00000013612ATXN19939.398Propithecus_coquereli
ENSXCOG00000019714atxn1b8840.614ENSPVAG00000016937ATXN19636.571Pteropus_vampyrus
ENSXCOG00000019714atxn1b9375.556ENSPNYG00000011920atxn1a8875.556Pundamilia_nyererei
ENSXCOG00000019714atxn1b10077.303ENSPNYG00000017095atxn1b10076.096Pundamilia_nyererei
ENSXCOG00000019714atxn1b9842.566ENSPNAG00000010587atxn1a9943.584Pygocentrus_nattereri
ENSXCOG00000019714atxn1b9841.335ENSPNAG00000001226atxn1b9940.749Pygocentrus_nattereri
ENSXCOG00000019714atxn1b9840.843ENSRNOG00000016998Atxn19939.952Rattus_norvegicus
ENSXCOG00000019714atxn1b9838.343ENSRBIG00000028213ATXN19938.961Rhinopithecus_bieti
ENSXCOG00000019714atxn1b9838.690ENSRROG00000032751ATXN19939.192Rhinopithecus_roxellana
ENSXCOG00000019714atxn1b9839.762ENSSBOG00000017381-9939.881Saimiri_boliviensis_boliviensis
ENSXCOG00000019714atxn1b8235.758ENSSBOG00000030307-9134.644Saimiri_boliviensis_boliviensis
ENSXCOG00000019714atxn1b9843.891ENSSFOG00015000179atxn1b9943.095Scleropages_formosus
ENSXCOG00000019714atxn1b9841.366ENSSFOG00015005189atxn19941.975Scleropages_formosus
ENSXCOG00000019714atxn1b9978.971ENSSMAG00000019621atxn1b9079.507Scophthalmus_maximus
ENSXCOG00000019714atxn1b9271.429ENSSMAG00000007731atxn1a9439.209Scophthalmus_maximus
ENSXCOG00000019714atxn1b9373.333ENSSDUG00000011376atxn1a9940.260Seriola_dumerili
ENSXCOG00000019714atxn1b10072.749ENSSDUG00000006990atxn1b10071.789Seriola_dumerili
ENSXCOG00000019714atxn1b9373.333ENSSLDG00000013505atxn1a9940.142Seriola_lalandi_dorsalis
ENSXCOG00000019714atxn1b10072.749ENSSLDG00000016306atxn1b9083.642Seriola_lalandi_dorsalis
ENSXCOG00000019714atxn1b9840.338ENSSPUG00000016650ATXN19940.217Sphenodon_punctatus
ENSXCOG00000019714atxn1b10079.685ENSSPAG00000003388atxn1b10079.947Stegastes_partitus
ENSXCOG00000019714atxn1b9377.778ENSSPAG00000019849atxn1a8877.778Stegastes_partitus
ENSXCOG00000019714atxn1b9839.130ENSSSCG00000001065ATXN19938.771Sus_scrofa
ENSXCOG00000019714atxn1b9839.372ENSTGUG00000005986ATXN19938.768Taeniopygia_guttata
ENSXCOG00000019714atxn1b9967.614ENSTRUG00000024789atxn1b9967.203Takifugu_rubripes
ENSXCOG00000019714atxn1b9839.708ENSTRUG00000014645atxn1a9939.927Takifugu_rubripes
ENSXCOG00000019714atxn1b9840.567ENSTNIG00000005089atxn1a9940.220Tetraodon_nigroviridis
ENSXCOG00000019714atxn1b9872.170ENSTNIG00000018398atxn1b9971.105Tetraodon_nigroviridis
ENSXCOG00000019714atxn1b9839.346ENSTTRG00000014678ATXN19639.416Tursiops_truncatus
ENSXCOG00000019714atxn1b9838.949ENSUAMG00000004064ATXN19939.068Ursus_americanus
ENSXCOG00000019714atxn1b5543.805ENSUMAG00000017635-9244.053Ursus_maritimus
ENSXCOG00000019714atxn1b9839.573ENSVVUG00000003386ATXN19939.218Vulpes_vulpes
ENSXCOG00000019714atxn1b9838.690ENSXETG00000014184atxn19938.443Xenopus_tropicalis
ENSXCOG00000019714atxn1b10091.448ENSXMAG00000014270atxn1b10091.448Xiphophorus_maculatus
ENSXCOG00000019714atxn1b9371.111ENSXMAG00000003615atxn1a9938.580Xiphophorus_maculatus

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