EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019735 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5505 bases
Position: chrKQ557218.1:15092442-15097946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026435	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026755	-	885	-	ENSXCOP00000026435	294 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019735	-	85	30.303	ENSXCOG00000009133	hnrnph1	51	34.177
ENSXCOG00000019735	-	85	36.585	ENSXCOG00000012095	hnrnph3	54	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019735	-	99	40.308	ENSG00000183808	RBM12B	99	76.543	Homo_sapiens
ENSXCOG00000019735	-	99	62.171	ENSAPOG00000013963	rbm12b	66	62.171	Acanthochromis_polyacanthus
ENSXCOG00000019735	-	99	30.721	ENSAPOG00000008836	zgc:153215	66	30.094	Acanthochromis_polyacanthus
ENSXCOG00000019735	-	97	68.531	ENSACIG00000014943	rbm12b	97	68.531	Amphilophus_citrinellus
ENSXCOG00000019735	-	99	62.171	ENSAOCG00000024270	rbm12b	66	62.171	Amphiprion_ocellaris
ENSXCOG00000019735	-	99	31.231	ENSAOCG00000010819	zgc:153215	67	30.149	Amphiprion_ocellaris
ENSXCOG00000019735	-	100	63.946	ENSAPEG00000022079	rbm12b	99	64.164	Amphiprion_percula
ENSXCOG00000019735	-	99	39.275	ENSANAG00000034015	RBM12B	54	38.941	Aotus_nancymaae
ENSXCOG00000019735	-	90	40.122	ENSACLG00000005578	rbm12b	83	39.222	Astatotilapia_calliptera
ENSXCOG00000019735	-	99	40.000	ENSCATG00000030769	RBM12B	53	38.941	Cercocebus_atys
ENSXCOG00000019735	-	99	40.000	ENSCANG00000030379	RBM12B	53	38.941	Colobus_angolensis_palliatus
ENSXCOG00000019735	-	73	35.484	ENSCSEG00000001575	-	57	35.484	Cynoglossus_semilaevis
ENSXCOG00000019735	-	99	70.915	ENSCVAG00000011047	rbm12b	66	70.915	Cyprinodon_variegatus
ENSXCOG00000019735	-	79	36.752	ENSCVAG00000009259	-	58	36.638	Cyprinodon_variegatus
ENSXCOG00000019735	-	99	41.040	ENSGAGG00000009774	RBM12B	50	38.551	Gopherus_agassizii
ENSXCOG00000019735	-	99	40.308	ENSGGOG00000011909	RBM12B	52	39.252	Gorilla_gorilla
ENSXCOG00000019735	-	99	64.356	ENSHBUG00000016227	rbm12b	64	64.356	Haplochromis_burtoni
ENSXCOG00000019735	-	99	54.072	ENSHCOG00000014952	rbm12b	69	54.072	Hippocampus_comes
ENSXCOG00000019735	-	99	32.414	ENSKMAG00000004958	zgc:153215	59	32.414	Kryptolebias_marmoratus
ENSXCOG00000019735	-	99	59.868	ENSKMAG00000013715	rbm12b	66	59.868	Kryptolebias_marmoratus
ENSXCOG00000019735	-	99	59.211	ENSKMAG00000013704	rbm12b	64	59.211	Kryptolebias_marmoratus
ENSXCOG00000019735	-	99	32.024	ENSLBEG00000002597	zgc:153215	68	31.672	Labrus_bergylta
ENSXCOG00000019735	-	99	43.143	ENSLACG00000007177	RBM12B	77	42.571	Latimeria_chalumnae
ENSXCOG00000019735	-	99	47.561	ENSLOCG00000018344	rbm12b	73	47.546	Lepisosteus_oculatus
ENSXCOG00000019735	-	99	40.000	ENSMFAG00000045430	RBM12B	53	38.941	Macaca_fascicularis
ENSXCOG00000019735	-	99	40.000	ENSMMUG00000005558	RBM12B	52	38.941	Macaca_mulatta
ENSXCOG00000019735	-	99	40.000	ENSMNEG00000041292	RBM12B	53	38.941	Macaca_nemestrina
ENSXCOG00000019735	-	99	40.000	ENSMLEG00000037288	RBM12B	52	39.252	Mandrillus_leucophaeus
ENSXCOG00000019735	-	98	54.967	ENSMMOG00000002404	rbm12b	94	54.967	Mola_mola
ENSXCOG00000019735	-	99	33.548	ENSMALG00000001222	zgc:153215	68	33.542	Monopterus_albus
ENSXCOG00000019735	-	100	39.752	ENSMUSG00000052137	Rbm12b2	55	39.264	Mus_musculus
ENSXCOG00000019735	-	100	39.752	ENSMUSG00000046667	Rbm12b1	55	39.877	Mus_musculus
ENSXCOG00000019735	-	100	40.184	MGP_SPRETEiJ_G0026765	-	50	39.264	Mus_spretus
ENSXCOG00000019735	-	100	40.184	MGP_SPRETEiJ_G0026766	-	55	39.877	Mus_spretus
ENSXCOG00000019735	-	99	65.017	ENSNBRG00000015057	rbm12b	66	65.017	Neolamprologus_brichardi
ENSXCOG00000019735	-	99	40.308	ENSNLEG00000032050	RBM12B	52	39.252	Nomascus_leucogenys
ENSXCOG00000019735	-	99	65.017	ENSONIG00000020612	rbm12b	90	65.017	Oreochromis_niloticus
ENSXCOG00000019735	-	99	60.197	ENSORLG00000008228	rbm12b	69	60.197	Oryzias_latipes
ENSXCOG00000019735	-	99	60.526	ENSORLG00020013619	rbm12b	69	60.526	Oryzias_latipes_hni
ENSXCOG00000019735	-	99	60.526	ENSORLG00015019999	rbm12b	69	60.526	Oryzias_latipes_hsok
ENSXCOG00000019735	-	99	32.990	ENSOMEG00000004220	zgc:153215	60	32.877	Oryzias_melastigma
ENSXCOG00000019735	-	99	40.308	ENSPTRG00000020420	RBM12B	52	39.252	Pan_troglodytes
ENSXCOG00000019735	-	99	40.000	ENSPANG00000035535	RBM12B	52	38.941	Papio_anubis
ENSXCOG00000019735	-	100	47.546	ENSPKIG00000018719	rbm12b	86	45.706	Paramormyrops_kingsleyae
ENSXCOG00000019735	-	99	41.791	ENSPSIG00000001348	RBM12B	69	41.194	Pelodiscus_sinensis
ENSXCOG00000019735	-	99	49.679	ENSPMGG00000012348	-	94	46.154	Periophthalmus_magnuspinnatus
ENSXCOG00000019735	-	99	42.623	ENSPFOG00000017451	zgc:153215	58	51.163	Poecilia_formosa
ENSXCOG00000019735	-	99	30.938	ENSPLAG00000000232	zgc:153215	69	30.312	Poecilia_latipinna
ENSXCOG00000019735	-	99	45.455	ENSPNAG00000008126	rbm12b	75	45.511	Pygocentrus_nattereri
ENSXCOG00000019735	-	99	40.491	ENSRNOG00000016330	Rbm12b	54	40.184	Rattus_norvegicus
ENSXCOG00000019735	-	99	40.491	ENSRNOG00000055292	LOC679087	61	40.184	Rattus_norvegicus
ENSXCOG00000019735	-	99	40.000	ENSRBIG00000035046	RBM12B	60	38.941	Rhinopithecus_bieti
ENSXCOG00000019735	-	99	40.000	ENSRROG00000023660	RBM12B	54	38.941	Rhinopithecus_roxellana
ENSXCOG00000019735	-	99	34.154	ENSSFOG00015009427	zgc:153215	67	33.231	Scleropages_formosus
ENSXCOG00000019735	-	99	31.325	ENSSMAG00000019013	zgc:153215	87	30.061	Scophthalmus_maximus
ENSXCOG00000019735	-	99	63.607	ENSSDUG00000006856	rbm12b	66	63.607	Seriola_dumerili
ENSXCOG00000019735	-	99	63.934	ENSSLDG00000016156	rbm12b	71	63.934	Seriola_lalandi_dorsalis
ENSXCOG00000019735	-	99	53.086	ENSSLDG00000013581	zgc:153215	73	43.363	Seriola_lalandi_dorsalis
ENSXCOG00000019735	-	99	38.462	ENSSPUG00000016954	RBM12B	62	39.316	Sphenodon_punctatus
ENSXCOG00000019735	-	99	62.500	ENSSPAG00000006774	rbm12b	71	62.500	Stegastes_partitus
ENSXCOG00000019735	-	99	34.828	ENSSPAG00000023584	zgc:153215	59	33.677	Stegastes_partitus
ENSXCOG00000019735	-	99	41.463	ENSTGUG00000011860	RBM12B	64	41.411	Taeniopygia_guttata
ENSXCOG00000019735	-	99	54.455	ENSTRUG00000013738	rbm12b	99	54.636	Takifugu_rubripes
ENSXCOG00000019735	-	99	41.615	ENSXETG00000014694	rbm12b	63	40.924	Xenopus_tropicalis
ENSXCOG00000019735	-	99	34.641	ENSXETG00000014696	rbm12b	60	34.641	Xenopus_tropicalis
ENSXCOG00000019735	-	98	30.189	ENSXMAG00000013169	-	73	30.189	Xiphophorus_maculatus