EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019852 (Gene tree)
Gene ID: -
Gene Symbol: dus3l
Alias: zgc:63779
Full Name: dihydrouridine synthase 3-like (S. cerevisiae)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5820 bases
Position: chrKQ557205.1:10469908-10475727
Accession: ZDB-GENE-040426-1260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026590	Dus	PF01207.17	8.1e-58	1	1
ENSXCOP00000026588	Dus	PF01207.17	8.4e-58	1	1
ENSXCOP00000026589	Dus	PF01207.17	8.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000026912	-	1269	-	ENSXCOP00000026588	422 (aa)	-	-
ENSXCOT00000026913	-	1281	-	ENSXCOP00000026589	426 (aa)	-	-
ENSXCOT00000026914	-	1260	-	ENSXCOP00000026590	419 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019852	dus3l	55	30.980	ENSXCOG00000000879	dus2	51	30.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019852	dus3l	92	75.258	ENSG00000141994	DUS3L	88	76.190	Homo_sapiens
ENSXCOG00000019852	dus3l	100	85.545	ENSAPOG00000016764	dus3l	66	85.545	Acanthochromis_polyacanthus
ENSXCOG00000019852	dus3l	89	74.194	ENSAMEG00000012423	-	57	74.194	Ailuropoda_melanoleuca
ENSXCOG00000019852	dus3l	100	85.849	ENSAOCG00000004343	dus3l	66	85.849	Amphiprion_ocellaris
ENSXCOG00000019852	dus3l	100	85.849	ENSAPEG00000005828	dus3l	66	85.849	Amphiprion_percula
ENSXCOG00000019852	dus3l	100	85.308	ENSATEG00000011064	dus3l	62	90.052	Anabas_testudineus
ENSXCOG00000019852	dus3l	97	74.092	ENSAPLG00000004636	-	69	74.092	Anas_platyrhynchos
ENSXCOG00000019852	dus3l	89	56.452	ENSACAG00000012955	-	61	56.452	Anolis_carolinensis
ENSXCOG00000019852	dus3l	89	77.212	ENSANAG00000021997	DUS3L	88	76.751	Aotus_nancymaae
ENSXCOG00000019852	dus3l	100	84.434	ENSACLG00000011576	dus3l	62	90.551	Astatotilapia_calliptera
ENSXCOG00000019852	dus3l	89	60.267	ENSAMXG00000043269	dus3l	56	60.106	Astyanax_mexicanus
ENSXCOG00000019852	dus3l	89	75.335	ENSBTAG00000011842	DUS3L	57	75.335	Bos_taurus
ENSXCOG00000019852	dus3l	82	56.571	WBGene00021377	Y37E11B.5	63	56.571	Caenorhabditis_elegans
ENSXCOG00000019852	dus3l	89	77.480	ENSCJAG00000016997	DUS3L	88	77.031	Callithrix_jacchus
ENSXCOG00000019852	dus3l	89	76.075	ENSCAFG00000018762	DUS3L	58	76.075	Canis_familiaris
ENSXCOG00000019852	dus3l	89	76.075	ENSCAFG00020018976	-	58	76.075	Canis_lupus_dingo
ENSXCOG00000019852	dus3l	89	75.871	ENSCHIG00000021327	-	63	72.449	Capra_hircus
ENSXCOG00000019852	dus3l	89	68.901	ENSCAPG00000012525	DUS3L	61	68.901	Cavia_aperea
ENSXCOG00000019852	dus3l	89	76.408	ENSCPOG00000021236	DUS3L	62	76.408	Cavia_porcellus
ENSXCOG00000019852	dus3l	89	77.480	ENSCCAG00000036889	DUS3L	88	76.751	Cebus_capucinus
ENSXCOG00000019852	dus3l	89	77.480	ENSCATG00000040809	DUS3L	88	76.751	Cercocebus_atys
ENSXCOG00000019852	dus3l	89	76.676	ENSCLAG00000008470	DUS3L	58	76.676	Chinchilla_lanigera
ENSXCOG00000019852	dus3l	89	77.748	ENSCSAG00000009883	DUS3L	57	77.748	Chlorocebus_sabaeus
ENSXCOG00000019852	dus3l	89	79.301	ENSCPBG00000011136	-	54	79.301	Chrysemys_picta_bellii
ENSXCOG00000019852	dus3l	94	64.899	ENSCING00000004940	zf(c3h)-5	65	64.899	Ciona_intestinalis
ENSXCOG00000019852	dus3l	88	66.757	ENSCSAVG00000000525	-	69	66.757	Ciona_savignyi
ENSXCOG00000019852	dus3l	89	77.748	ENSCANG00000036677	DUS3L	88	77.031	Colobus_angolensis_palliatus
ENSXCOG00000019852	dus3l	89	76.676	ENSCGRG00001023361	Dus3l	58	76.676	Cricetulus_griseus_chok1gshd
ENSXCOG00000019852	dus3l	89	76.676	ENSCGRG00000005214	Dus3l	58	76.676	Cricetulus_griseus_crigri
ENSXCOG00000019852	dus3l	99	86.019	ENSCSEG00000014994	dus3l	64	88.947	Cynoglossus_semilaevis
ENSXCOG00000019852	dus3l	95	81.047	ENSCVAG00000007874	dus3l	60	86.253	Cyprinodon_variegatus
ENSXCOG00000019852	dus3l	89	86.631	ENSDARG00000099528	dus3l	100	86.607	Danio_rerio
ENSXCOG00000019852	dus3l	84	80.114	ENSDORG00000006754	Dus3l	68	80.114	Dipodomys_ordii
ENSXCOG00000019852	dus3l	90	54.354	FBgn0032819	CG10463	63	54.354	Drosophila_melanogaster
ENSXCOG00000019852	dus3l	89	72.043	ENSEBUG00000010532	dus3l	52	72.043	Eptatretus_burgeri
ENSXCOG00000019852	dus3l	89	74.531	ENSECAG00000019359	-	57	74.531	Equus_caballus
ENSXCOG00000019852	dus3l	99	78.469	ENSELUG00000015033	dus3l	60	85.174	Esox_lucius
ENSXCOG00000019852	dus3l	92	73.711	ENSFCAG00000027534	-	88	75.350	Felis_catus
ENSXCOG00000019852	dus3l	89	77.394	ENSFALG00000001343	-	56	77.394	Ficedula_albicollis
ENSXCOG00000019852	dus3l	89	65.684	ENSFDAG00000014182	DUS3L	61	67.024	Fukomys_damarensis
ENSXCOG00000019852	dus3l	100	87.441	ENSFHEG00000010091	dus3l	60	93.194	Fundulus_heteroclitus
ENSXCOG00000019852	dus3l	89	87.903	ENSGMOG00000011366	dus3l	97	87.903	Gadus_morhua
ENSXCOG00000019852	dus3l	91	78.215	ENSGALG00000001800	-	56	78.215	Gallus_gallus
ENSXCOG00000019852	dus3l	100	92.891	ENSGAFG00000008857	dus3l	66	92.891	Gambusia_affinis
ENSXCOG00000019852	dus3l	99	83.135	ENSGACG00000004109	dus3l	62	89.418	Gasterosteus_aculeatus
ENSXCOG00000019852	dus3l	89	79.570	ENSGAGG00000005527	-	61	79.570	Gopherus_agassizii
ENSXCOG00000019852	dus3l	92	68.814	ENSGGOG00000027433	DUS3L	86	69.188	Gorilla_gorilla
ENSXCOG00000019852	dus3l	100	84.198	ENSHBUG00000022232	dus3l	60	91.689	Haplochromis_burtoni
ENSXCOG00000019852	dus3l	89	76.408	ENSHGLG00000013475	DUS3L	58	76.408	Heterocephalus_glaber_female
ENSXCOG00000019852	dus3l	89	76.408	ENSHGLG00100007077	DUS3L	58	76.408	Heterocephalus_glaber_male
ENSXCOG00000019852	dus3l	100	83.175	ENSHCOG00000016072	dus3l	59	90.591	Hippocampus_comes
ENSXCOG00000019852	dus3l	89	84.759	ENSIPUG00000004025	dus3l	58	84.759	Ictalurus_punctatus
ENSXCOG00000019852	dus3l	89	76.944	ENSSTOG00000025017	DUS3L	58	76.944	Ictidomys_tridecemlineatus
ENSXCOG00000019852	dus3l	92	73.177	ENSJJAG00000023742	Dus3l	61	73.177	Jaculus_jaculus
ENSXCOG00000019852	dus3l	99	84.964	ENSKMAG00000009675	dus3l	60	91.099	Kryptolebias_marmoratus
ENSXCOG00000019852	dus3l	100	80.095	ENSLBEG00000015795	dus3l	57	91.738	Labrus_bergylta
ENSXCOG00000019852	dus3l	89	80.593	ENSLACG00000001204	dus3l	53	80.593	Latimeria_chalumnae
ENSXCOG00000019852	dus3l	89	83.690	ENSLOCG00000010531	dus3l	54	83.690	Lepisosteus_oculatus
ENSXCOG00000019852	dus3l	95	75.188	ENSLAFG00000027552	-	57	79.357	Loxodonta_africana
ENSXCOG00000019852	dus3l	93	74.873	ENSMFAG00000031910	DUS3L	88	77.031	Macaca_fascicularis
ENSXCOG00000019852	dus3l	85	77.031	ENSMMUG00000031027	DUS3L	88	77.031	Macaca_mulatta
ENSXCOG00000019852	dus3l	69	77.533	ENSMNEG00000036509	DUS3L	52	77.533	Macaca_nemestrina
ENSXCOG00000019852	dus3l	89	77.480	ENSMLEG00000043222	DUS3L	88	76.751	Mandrillus_leucophaeus
ENSXCOG00000019852	dus3l	100	86.019	ENSMAMG00000015637	dus3l	66	86.019	Mastacembelus_armatus
ENSXCOG00000019852	dus3l	100	84.597	ENSMZEG00005026661	dus3l	60	91.667	Maylandia_zebra
ENSXCOG00000019852	dus3l	92	77.320	ENSMGAG00000001547	-	60	79.357	Meleagris_gallopavo
ENSXCOG00000019852	dus3l	89	77.212	ENSMAUG00000008347	Dus3l	59	77.212	Mesocricetus_auratus
ENSXCOG00000019852	dus3l	89	75.871	ENSMICG00000007097	DUS3L	57	75.871	Microcebus_murinus
ENSXCOG00000019852	dus3l	89	77.212	ENSMOCG00000021796	Dus3l	59	77.212	Microtus_ochrogaster
ENSXCOG00000019852	dus3l	91	90.576	ENSMMOG00000018377	dus3l	62	90.576	Mola_mola
ENSXCOG00000019852	dus3l	89	78.495	ENSMODG00000001339	-	51	78.495	Monodelphis_domestica
ENSXCOG00000019852	dus3l	100	82.227	ENSMALG00000007559	dus3l	60	88.267	Monopterus_albus
ENSXCOG00000019852	dus3l	89	76.676	MGP_CAROLIEiJ_G0021789	Dus3l	59	76.676	Mus_caroli
ENSXCOG00000019852	dus3l	100	67.191	ENSMUSG00000007603	Dus3l	70	67.191	Mus_musculus
ENSXCOG00000019852	dus3l	89	76.944	MGP_PahariEiJ_G0020778	Dus3l	59	76.944	Mus_pahari
ENSXCOG00000019852	dus3l	100	67.191	MGP_SPRETEiJ_G0022700	Dus3l	70	67.191	Mus_spretus
ENSXCOG00000019852	dus3l	89	76.550	ENSMPUG00000006188	-	57	76.550	Mustela_putorius_furo
ENSXCOG00000019852	dus3l	92	73.265	ENSMLUG00000007159	-	60	73.265	Myotis_lucifugus
ENSXCOG00000019852	dus3l	98	70.142	ENSNGAG00000017157	Dus3l	68	70.142	Nannospalax_galili
ENSXCOG00000019852	dus3l	80	91.071	ENSNBRG00000015011	dus3l	59	91.071	Neolamprologus_brichardi
ENSXCOG00000019852	dus3l	92	76.042	ENSNLEG00000013734	DUS3L	88	77.031	Nomascus_leucogenys
ENSXCOG00000019852	dus3l	93	75.190	ENSMEUG00000014401	-	79	75.190	Notamacropus_eugenii
ENSXCOG00000019852	dus3l	99	68.822	ENSODEG00000015771	DUS3L	70	68.822	Octodon_degus
ENSXCOG00000019852	dus3l	100	84.977	ENSONIG00000019793	dus3l	67	84.977	Oreochromis_niloticus
ENSXCOG00000019852	dus3l	89	70.430	ENSOANG00000004386	-	56	70.430	Ornithorhynchus_anatinus
ENSXCOG00000019852	dus3l	90	88.889	ENSORLG00000030245	dus3l	59	88.889	Oryzias_latipes
ENSXCOG00000019852	dus3l	90	88.360	ENSOMEG00000023500	dus3l	59	88.360	Oryzias_melastigma
ENSXCOG00000019852	dus3l	91	75.648	ENSOGAG00000016549	DUS3L	60	76.738	Otolemur_garnettii
ENSXCOG00000019852	dus3l	74	67.203	ENSOARG00000007052	-	53	67.203	Ovis_aries
ENSXCOG00000019852	dus3l	92	75.515	ENSPPAG00000038054	DUS3L	88	76.471	Pan_paniscus
ENSXCOG00000019852	dus3l	92	73.711	ENSPPRG00000000633	-	88	75.070	Panthera_pardus
ENSXCOG00000019852	dus3l	92	75.258	ENSPTRG00000010343	DUS3L	88	76.190	Pan_troglodytes
ENSXCOG00000019852	dus3l	89	71.582	ENSPANG00000015039	DUS3L	87	70.787	Papio_anubis
ENSXCOG00000019852	dus3l	92	81.234	ENSPKIG00000018035	dus3l	59	83.646	Paramormyrops_kingsleyae
ENSXCOG00000019852	dus3l	89	79.570	ENSPSIG00000004965	-	61	79.570	Pelodiscus_sinensis
ENSXCOG00000019852	dus3l	100	79.384	ENSPMGG00000021422	dus3l	60	85.676	Periophthalmus_magnuspinnatus
ENSXCOG00000019852	dus3l	92	74.103	ENSPEMG00000020784	Dus3l	62	74.103	Peromyscus_maniculatus_bairdii
ENSXCOG00000019852	dus3l	89	75.603	ENSPMAG00000007671	dus3l	58	75.603	Petromyzon_marinus
ENSXCOG00000019852	dus3l	92	71.979	ENSPCIG00000008483	-	96	78.869	Phascolarctos_cinereus
ENSXCOG00000019852	dus3l	99	92.162	ENSPFOG00000006750	dus3l	60	97.644	Poecilia_formosa
ENSXCOG00000019852	dus3l	99	92.637	ENSPLAG00000011636	dus3l	62	96.883	Poecilia_latipinna
ENSXCOG00000019852	dus3l	99	89.549	ENSPMEG00000011343	dus3l	60	97.312	Poecilia_mexicana
ENSXCOG00000019852	dus3l	100	91.706	ENSPREG00000012315	dus3l	66	91.706	Poecilia_reticulata
ENSXCOG00000019852	dus3l	92	71.907	ENSPPYG00000009435	DUS3L	56	73.727	Pongo_abelii
ENSXCOG00000019852	dus3l	89	76.944	ENSPCOG00000026203	DUS3L	60	74.490	Propithecus_coquereli
ENSXCOG00000019852	dus3l	100	84.634	ENSPNYG00000009052	dus3l	62	90.551	Pundamilia_nyererei
ENSXCOG00000019852	dus3l	92	82.902	ENSPNAG00000022347	dus3l	59	82.902	Pygocentrus_nattereri
ENSXCOG00000019852	dus3l	89	77.212	ENSRNOG00000050381	Dus3l	58	77.212	Rattus_norvegicus
ENSXCOG00000019852	dus3l	75	79.775	ENSRBIG00000025322	DUS3L	85	78.571	Rhinopithecus_bieti
ENSXCOG00000019852	dus3l	89	77.480	ENSRROG00000037008	DUS3L	88	76.751	Rhinopithecus_roxellana
ENSXCOG00000019852	dus3l	84	44.855	YLR401C	-	57	44.855	Saccharomyces_cerevisiae
ENSXCOG00000019852	dus3l	89	77.480	ENSSBOG00000020402	DUS3L	88	77.031	Saimiri_boliviensis_boliviensis
ENSXCOG00000019852	dus3l	92	75.773	ENSSHAG00000014156	-	58	77.807	Sarcophilus_harrisii
ENSXCOG00000019852	dus3l	89	84.182	ENSSFOG00015008797	dus3l	56	84.571	Scleropages_formosus
ENSXCOG00000019852	dus3l	100	85.782	ENSSMAG00000004896	dus3l	63	91.099	Scophthalmus_maximus
ENSXCOG00000019852	dus3l	100	87.264	ENSSDUG00000013517	dus3l	64	92.857	Seriola_dumerili
ENSXCOG00000019852	dus3l	100	86.792	ENSSLDG00000016115	dus3l	66	86.792	Seriola_lalandi_dorsalis
ENSXCOG00000019852	dus3l	79	77.879	ENSSPUG00000011128	-	94	77.879	Sphenodon_punctatus
ENSXCOG00000019852	dus3l	94	84.673	ENSSPAG00000018660	dus3l	65	84.673	Stegastes_partitus
ENSXCOG00000019852	dus3l	92	73.846	ENSSSCG00000040968	-	60	73.846	Sus_scrofa
ENSXCOG00000019852	dus3l	89	77.778	ENSTGUG00000001021	-	61	77.778	Taeniopygia_guttata
ENSXCOG00000019852	dus3l	100	82.227	ENSTRUG00000013055	dus3l	60	88.624	Takifugu_rubripes
ENSXCOG00000019852	dus3l	100	81.991	ENSTNIG00000017537	dus3l	61	89.785	Tetraodon_nigroviridis
ENSXCOG00000019852	dus3l	98	70.048	ENSUAMG00000024269	-	69	75.538	Ursus_americanus
ENSXCOG00000019852	dus3l	89	66.142	ENSUMAG00000010831	-	56	66.142	Ursus_maritimus
ENSXCOG00000019852	dus3l	89	76.075	ENSVVUG00000013781	-	58	76.075	Vulpes_vulpes
ENSXCOG00000019852	dus3l	89	80.161	ENSXETG00000027405	dus3l	59	79.733	Xenopus_tropicalis
ENSXCOG00000019852	dus3l	100	93.365	ENSXMAG00000015252	dus3l	65	93.365	Xiphophorus_maculatus