EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019952 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 26775 bases
Position: chrKQ557221.1:27807128-27833902
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026705	La	PF05383.17	1.1e-13	1	1
ENSXCOP00000026706	La	PF05383.17	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027032	LARP4B-201	2103	-	ENSXCOP00000026705	700 (aa)	-	-
ENSXCOT00000027033	LARP4B-202	558	-	ENSXCOP00000026706	185 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019952	LARP4B	68	59.843	ENSXCOG00000019635	larp4ab	97	46.226
ENSXCOG00000019952	LARP4B	74	59.854	ENSXCOG00000006387	larp4aa	82	35.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019952	LARP4B	100	53.238	ENSG00000107929	LARP4B	100	53.238	Homo_sapiens
ENSXCOG00000019952	LARP4B	100	69.986	ENSAPOG00000020531	LARP4B	100	70.396	Acanthochromis_polyacanthus
ENSXCOG00000019952	LARP4B	65	67.769	ENSAPOG00000020631	-	52	67.769	Acanthochromis_polyacanthus
ENSXCOG00000019952	LARP4B	68	81.102	ENSAMEG00000001810	LARP4B	100	50.843	Ailuropoda_melanoleuca
ENSXCOG00000019952	LARP4B	96	69.492	ENSAOCG00000007887	-	94	75.342	Amphiprion_ocellaris
ENSXCOG00000019952	LARP4B	63	98.291	ENSAPEG00000002512	LARP4B	96	67.585	Amphiprion_percula
ENSXCOG00000019952	LARP4B	100	64.225	ENSATEG00000012614	LARP4B	100	65.432	Anabas_testudineus
ENSXCOG00000019952	LARP4B	72	83.824	ENSAPLG00000003813	LARP4B	98	54.103	Anas_platyrhynchos
ENSXCOG00000019952	LARP4B	72	83.824	ENSACAG00000002858	LARP4B	100	53.479	Anolis_carolinensis
ENSXCOG00000019952	LARP4B	100	53.101	ENSANAG00000007531	-	100	52.979	Aotus_nancymaae
ENSXCOG00000019952	LARP4B	100	70.683	ENSACLG00000026356	LARP4B	100	70.850	Astatotilapia_calliptera
ENSXCOG00000019952	LARP4B	65	81.818	ENSAMXG00000003335	larp4b	96	48.645	Astyanax_mexicanus
ENSXCOG00000019952	LARP4B	63	89.744	ENSBTAG00000013899	LARP4B	100	51.746	Bos_taurus
ENSXCOG00000019952	LARP4B	77	77.397	ENSCJAG00000018434	LARP4B	100	52.338	Callithrix_jacchus
ENSXCOG00000019952	LARP4B	68	85.039	ENSCAFG00020004209	LARP4B	100	51.613	Canis_lupus_dingo
ENSXCOG00000019952	LARP4B	63	89.744	ENSCHIG00000013543	LARP4B	98	52.215	Capra_hircus
ENSXCOG00000019952	LARP4B	78	76.190	ENSTSYG00000002568	LARP4B	99	58.158	Carlito_syrichta
ENSXCOG00000019952	LARP4B	68	84.252	ENSCAPG00000009725	LARP4B	81	52.800	Cavia_aperea
ENSXCOG00000019952	LARP4B	100	53.737	ENSCPOG00000009375	LARP4B	100	53.737	Cavia_porcellus
ENSXCOG00000019952	LARP4B	68	87.302	ENSCCAG00000024869	LARP4B	100	53.101	Cebus_capucinus
ENSXCOG00000019952	LARP4B	65	89.344	ENSCATG00000019750	LARP4B	100	53.756	Cercocebus_atys
ENSXCOG00000019952	LARP4B	100	53.935	ENSCLAG00000011570	LARP4B	100	53.935	Chinchilla_lanigera
ENSXCOG00000019952	LARP4B	57	88.889	ENSCHOG00000007831	-	54	88.889	Choloepus_hoffmanni
ENSXCOG00000019952	LARP4B	72	83.088	ENSCPBG00000017063	LARP4B	100	53.608	Chrysemys_picta_bellii
ENSXCOG00000019952	LARP4B	65	89.344	ENSCANG00000038021	LARP4B	100	51.688	Colobus_angolensis_palliatus
ENSXCOG00000019952	LARP4B	68	85.039	ENSCGRG00001022930	Larp4b	100	56.923	Cricetulus_griseus_chok1gshd
ENSXCOG00000019952	LARP4B	68	85.039	ENSCGRG00000006022	Larp4b	100	56.923	Cricetulus_griseus_crigri
ENSXCOG00000019952	LARP4B	100	67.166	ENSCSEG00000007342	LARP4B	100	67.166	Cynoglossus_semilaevis
ENSXCOG00000019952	LARP4B	61	61.062	ENSCSEG00000001202	-	86	53.788	Cynoglossus_semilaevis
ENSXCOG00000019952	LARP4B	100	71.937	ENSCVAG00000008910	LARP4B	100	72.776	Cyprinodon_variegatus
ENSXCOG00000019952	LARP4B	65	83.471	ENSDARG00000062146	larp4b	99	48.797	Danio_rerio
ENSXCOG00000019952	LARP4B	68	85.039	ENSDNOG00000045543	-	99	59.163	Dasypus_novemcinctus
ENSXCOG00000019952	LARP4B	65	88.525	ENSDORG00000009328	Larp4b	100	54.811	Dipodomys_ordii
ENSXCOG00000019952	LARP4B	85	55.460	ENSETEG00000011249	LARP4B	89	55.460	Echinops_telfairi
ENSXCOG00000019952	LARP4B	63	90.598	ENSEASG00005019068	-	100	51.675	Equus_asinus_asinus
ENSXCOG00000019952	LARP4B	63	90.598	ENSECAG00000024040	LARP4B	100	52.118	Equus_caballus
ENSXCOG00000019952	LARP4B	63	90.598	ENSEEUG00000008391	LARP4B	98	51.097	Erinaceus_europaeus
ENSXCOG00000019952	LARP4B	63	96.581	ENSELUG00000008626	LARP4B	100	60.453	Esox_lucius
ENSXCOG00000019952	LARP4B	63	76.068	ENSELUG00000001417	-	96	41.014	Esox_lucius
ENSXCOG00000019952	LARP4B	63	90.598	ENSFCAG00000000721	-	100	52.010	Felis_catus
ENSXCOG00000019952	LARP4B	72	83.824	ENSFALG00000006961	LARP4B	100	54.370	Ficedula_albicollis
ENSXCOG00000019952	LARP4B	100	53.677	ENSFDAG00000006158	LARP4B	97	54.134	Fukomys_damarensis
ENSXCOG00000019952	LARP4B	100	67.862	ENSFHEG00000013037	LARP4B	100	67.995	Fundulus_heteroclitus
ENSXCOG00000019952	LARP4B	66	62.295	ENSFHEG00000011539	-	55	48.855	Fundulus_heteroclitus
ENSXCOG00000019952	LARP4B	68	86.614	ENSGMOG00000010818	-	88	74.545	Gadus_morhua
ENSXCOG00000019952	LARP4B	83	76.623	ENSGALG00000006672	LARP4B	100	53.856	Gallus_gallus
ENSXCOG00000019952	LARP4B	68	91.339	ENSGAFG00000002038	-	72	80.645	Gambusia_affinis
ENSXCOG00000019952	LARP4B	100	63.910	ENSGACG00000017535	LARP4B	98	64.662	Gasterosteus_aculeatus
ENSXCOG00000019952	LARP4B	72	83.088	ENSGAGG00000008598	LARP4B	86	58.293	Gopherus_agassizii
ENSXCOG00000019952	LARP4B	65	88.525	ENSGGOG00000003572	LARP4B	100	53.117	Gorilla_gorilla
ENSXCOG00000019952	LARP4B	100	70.844	ENSHBUG00000007535	LARP4B	100	71.258	Haplochromis_burtoni
ENSXCOG00000019952	LARP4B	100	53.599	ENSHGLG00000012936	LARP4B	100	53.479	Heterocephalus_glaber_female
ENSXCOG00000019952	LARP4B	100	53.230	ENSHGLG00100016220	-	100	53.238	Heterocephalus_glaber_male
ENSXCOG00000019952	LARP4B	63	83.761	ENSHGLG00100017261	-	100	50.479	Heterocephalus_glaber_male
ENSXCOG00000019952	LARP4B	99	63.058	ENSHCOG00000011581	LARP4B	89	63.058	Hippocampus_comes
ENSXCOG00000019952	LARP4B	65	82.645	ENSIPUG00000009705	larp4b	98	48.901	Ictalurus_punctatus
ENSXCOG00000019952	LARP4B	100	53.222	ENSSTOG00000000587	LARP4B	100	53.101	Ictidomys_tridecemlineatus
ENSXCOG00000019952	LARP4B	100	53.273	ENSJJAG00000020847	Larp4b	100	53.153	Jaculus_jaculus
ENSXCOG00000019952	LARP4B	100	69.974	ENSKMAG00000021674	LARP4B	100	70.385	Kryptolebias_marmoratus
ENSXCOG00000019952	LARP4B	63	98.291	ENSLBEG00000025293	-	82	68.116	Labrus_bergylta
ENSXCOG00000019952	LARP4B	66	89.344	ENSLACG00000009492	LARP4B	89	56.068	Latimeria_chalumnae
ENSXCOG00000019952	LARP4B	100	56.781	ENSLOCG00000012290	larp4b	100	57.323	Lepisosteus_oculatus
ENSXCOG00000019952	LARP4B	68	85.827	ENSLAFG00000015334	LARP4B	100	53.368	Loxodonta_africana
ENSXCOG00000019952	LARP4B	65	89.344	ENSMFAG00000001766	LARP4B	100	51.813	Macaca_fascicularis
ENSXCOG00000019952	LARP4B	65	89.344	ENSMMUG00000005279	LARP4B	100	53.756	Macaca_mulatta
ENSXCOG00000019952	LARP4B	65	89.344	ENSMNEG00000014019	LARP4B	100	51.684	Macaca_nemestrina
ENSXCOG00000019952	LARP4B	65	89.344	ENSMLEG00000035198	LARP4B	100	53.816	Mandrillus_leucophaeus
ENSXCOG00000019952	LARP4B	100	66.080	ENSMAMG00000013742	LARP4B	100	66.080	Mastacembelus_armatus
ENSXCOG00000019952	LARP4B	63	97.436	ENSMZEG00005014594	-	100	67.891	Maylandia_zebra
ENSXCOG00000019952	LARP4B	100	68.716	ENSMZEG00005006498	-	100	68.759	Maylandia_zebra
ENSXCOG00000019952	LARP4B	74	82.734	ENSMGAG00000005472	LARP4B	100	53.470	Meleagris_gallopavo
ENSXCOG00000019952	LARP4B	68	85.039	ENSMAUG00000021657	Larp4b	100	57.436	Mesocricetus_auratus
ENSXCOG00000019952	LARP4B	63	91.453	ENSMICG00000001301	LARP4B	100	52.185	Microcebus_murinus
ENSXCOG00000019952	LARP4B	68	85.039	ENSMOCG00000021452	Larp4b	100	57.118	Microtus_ochrogaster
ENSXCOG00000019952	LARP4B	100	63.257	ENSMMOG00000011253	-	100	63.257	Mola_mola
ENSXCOG00000019952	LARP4B	68	84.252	ENSMODG00000005957	LARP4B	100	51.980	Monodelphis_domestica
ENSXCOG00000019952	LARP4B	100	64.336	ENSMALG00000012432	LARP4B	100	64.615	Monopterus_albus
ENSXCOG00000019952	LARP4B	68	85.039	MGP_CAROLIEiJ_G0018216	Larp4b	100	52.821	Mus_caroli
ENSXCOG00000019952	LARP4B	100	53.590	ENSMUSG00000033499	Larp4b	100	57.607	Mus_musculus
ENSXCOG00000019952	LARP4B	100	53.777	MGP_PahariEiJ_G0019266	Larp4b	100	57.363	Mus_pahari
ENSXCOG00000019952	LARP4B	100	53.462	MGP_SPRETEiJ_G0019074	Larp4b	100	57.607	Mus_spretus
ENSXCOG00000019952	LARP4B	68	85.039	ENSMPUG00000016220	LARP4B	97	52.129	Mustela_putorius_furo
ENSXCOG00000019952	LARP4B	68	85.039	ENSMLUG00000005880	LARP4B	99	51.893	Myotis_lucifugus
ENSXCOG00000019952	LARP4B	100	53.069	ENSNGAG00000001750	Larp4b	100	53.069	Nannospalax_galili
ENSXCOG00000019952	LARP4B	100	63.661	ENSNBRG00000020018	LARP4B	100	63.711	Neolamprologus_brichardi
ENSXCOG00000019952	LARP4B	100	53.048	ENSNLEG00000013442	LARP4B	100	53.437	Nomascus_leucogenys
ENSXCOG00000019952	LARP4B	81	45.136	ENSMEUG00000013114	-	83	45.136	Notamacropus_eugenii
ENSXCOG00000019952	LARP4B	65	86.885	ENSOPRG00000003300	LARP4B	100	51.546	Ochotona_princeps
ENSXCOG00000019952	LARP4B	100	50.518	ENSODEG00000001109	LARP4B	100	50.390	Octodon_degus
ENSXCOG00000019952	LARP4B	100	68.830	ENSONIG00000017705	LARP4B	100	69.202	Oreochromis_niloticus
ENSXCOG00000019952	LARP4B	72	83.212	ENSOANG00000006100	LARP4B	100	52.545	Ornithorhynchus_anatinus
ENSXCOG00000019952	LARP4B	78	76.190	ENSOCUG00000004950	LARP4B	97	51.385	Oryctolagus_cuniculus
ENSXCOG00000019952	LARP4B	100	66.667	ENSORLG00000006080	LARP4B	100	66.667	Oryzias_latipes
ENSXCOG00000019952	LARP4B	100	70.455	ENSORLG00020020940	LARP4B	100	70.455	Oryzias_latipes_hni
ENSXCOG00000019952	LARP4B	100	70.470	ENSORLG00015020608	LARP4B	100	70.470	Oryzias_latipes_hsok
ENSXCOG00000019952	LARP4B	100	69.169	ENSOMEG00000019619	LARP4B	100	69.169	Oryzias_melastigma
ENSXCOG00000019952	LARP4B	68	87.402	ENSOGAG00000011540	LARP4B	99	52.420	Otolemur_garnettii
ENSXCOG00000019952	LARP4B	63	89.744	ENSOARG00000015320	LARP4B	98	51.742	Ovis_aries
ENSXCOG00000019952	LARP4B	65	88.525	ENSPPAG00000039232	LARP4B	100	53.377	Pan_paniscus
ENSXCOG00000019952	LARP4B	65	88.525	ENSPPRG00000009489	LARP4B	100	52.214	Panthera_pardus
ENSXCOG00000019952	LARP4B	68	85.039	ENSPTIG00000008543	LARP4B	100	52.214	Panthera_tigris_altaica
ENSXCOG00000019952	LARP4B	65	88.525	ENSPTRG00000002235	LARP4B	100	53.377	Pan_troglodytes
ENSXCOG00000019952	LARP4B	65	89.344	ENSPANG00000023546	LARP4B	100	51.813	Papio_anubis
ENSXCOG00000019952	LARP4B	71	82.836	ENSPKIG00000012368	LARP4B	99	52.971	Paramormyrops_kingsleyae
ENSXCOG00000019952	LARP4B	74	80.714	ENSPSIG00000005600	LARP4B	98	61.981	Pelodiscus_sinensis
ENSXCOG00000019952	LARP4B	66	92.623	ENSPMGG00000008261	LARP4B	89	61.572	Periophthalmus_magnuspinnatus
ENSXCOG00000019952	LARP4B	67	47.692	ENSPMGG00000023487	-	73	47.692	Periophthalmus_magnuspinnatus
ENSXCOG00000019952	LARP4B	68	85.039	ENSPEMG00000014052	Larp4b	100	52.202	Peromyscus_maniculatus_bairdii
ENSXCOG00000019952	LARP4B	100	73.618	ENSPFOG00000000029	LARP4B	100	73.962	Poecilia_formosa
ENSXCOG00000019952	LARP4B	100	81.536	ENSPLAG00000002871	LARP4B	100	81.536	Poecilia_latipinna
ENSXCOG00000019952	LARP4B	100	76.852	ENSPMEG00000016361	LARP4B	100	77.351	Poecilia_mexicana
ENSXCOG00000019952	LARP4B	68	85.039	ENSPPYG00000002035	LARP4B	97	52.666	Pongo_abelii
ENSXCOG00000019952	LARP4B	68	85.827	ENSPCOG00000014688	LARP4B	100	52.231	Propithecus_coquereli
ENSXCOG00000019952	LARP4B	83	52.657	ENSPVAG00000009784	LARP4B	82	53.140	Pteropus_vampyrus
ENSXCOG00000019952	LARP4B	100	70.196	ENSPNYG00000024252	LARP4B	100	70.604	Pundamilia_nyererei
ENSXCOG00000019952	LARP4B	65	82.645	ENSPNAG00000028956	larp4b	97	49.588	Pygocentrus_nattereri
ENSXCOG00000019952	LARP4B	68	85.039	ENSRNOG00000015888	Larp4b	100	53.687	Rattus_norvegicus
ENSXCOG00000019952	LARP4B	65	89.344	ENSRBIG00000033294	LARP4B	100	53.627	Rhinopithecus_bieti
ENSXCOG00000019952	LARP4B	65	89.344	ENSRROG00000033879	LARP4B	100	53.886	Rhinopithecus_roxellana
ENSXCOG00000019952	LARP4B	100	49.354	ENSSBOG00000021109	LARP4B	100	49.354	Saimiri_boliviensis_boliviensis
ENSXCOG00000019952	LARP4B	100	52.672	ENSSHAG00000013392	LARP4B	100	52.874	Sarcophilus_harrisii
ENSXCOG00000019952	LARP4B	68	86.614	ENSSFOG00015003256	LARP4B	93	53.631	Scleropages_formosus
ENSXCOG00000019952	LARP4B	87	96.552	ENSSMAG00000005982	-	100	96.552	Scophthalmus_maximus
ENSXCOG00000019952	LARP4B	100	70.728	ENSSDUG00000006704	LARP4B	100	70.993	Seriola_dumerili
ENSXCOG00000019952	LARP4B	100	68.928	ENSSLDG00000020660	LARP4B	100	69.335	Seriola_lalandi_dorsalis
ENSXCOG00000019952	LARP4B	64	88.421	ENSSARG00000001243	-	77	88.421	Sorex_araneus
ENSXCOG00000019952	LARP4B	100	57.084	ENSSPUG00000002102	-	100	57.007	Sphenodon_punctatus
ENSXCOG00000019952	LARP4B	90	69.364	ENSSPUG00000013734	-	100	54.472	Sphenodon_punctatus
ENSXCOG00000019952	LARP4B	100	68.120	ENSSPAG00000014628	LARP4B	100	68.120	Stegastes_partitus
ENSXCOG00000019952	LARP4B	100	52.850	ENSSSCG00000011162	LARP4B	100	52.850	Sus_scrofa
ENSXCOG00000019952	LARP4B	65	91.803	ENSTGUG00000013982	-	100	84.672	Taeniopygia_guttata
ENSXCOG00000019952	LARP4B	72	83.824	ENSTGUG00000000811	-	100	54.651	Taeniopygia_guttata
ENSXCOG00000019952	LARP4B	100	64.119	ENSTNIG00000004571	-	98	64.524	Tetraodon_nigroviridis
ENSXCOG00000019952	LARP4B	99	63.329	ENSTNIG00000007991	LARP4B	99	63.171	Tetraodon_nigroviridis
ENSXCOG00000019952	LARP4B	68	84.252	ENSTTRG00000011151	LARP4B	83	56.687	Tursiops_truncatus
ENSXCOG00000019952	LARP4B	68	85.039	ENSUAMG00000016461	LARP4B	95	53.566	Ursus_americanus
ENSXCOG00000019952	LARP4B	68	85.039	ENSUMAG00000016127	LARP4B	100	51.684	Ursus_maritimus
ENSXCOG00000019952	LARP4B	78	71.622	ENSVPAG00000000128	-	63	80.571	Vicugna_pacos
ENSXCOG00000019952	LARP4B	68	85.039	ENSVVUG00000008641	LARP4B	100	51.871	Vulpes_vulpes
ENSXCOG00000019952	LARP4B	68	87.402	ENSXETG00000016882	larp4b	98	54.079	Xenopus_tropicalis
ENSXCOG00000019952	LARP4B	100	81.258	ENSXMAG00000021533	LARP4B	100	81.233	Xiphophorus_maculatus