EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000019963 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 14227 bases
Position: chrKQ557221.1:28016175-28030401
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026729	dsrm	PF00035.26	8.5e-22	1	2
ENSXCOP00000026729	dsrm	PF00035.26	8.5e-22	2	2
ENSXCOP00000026728	dsrm	PF00035.26	2e-20	1	2
ENSXCOP00000026728	dsrm	PF00035.26	2e-20	2	2
ENSXCOP00000026729	A_deamin	PF02137.18	6e-92	1	1
ENSXCOP00000026728	A_deamin	PF02137.18	1.1e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027055	-	2004	-	ENSXCOP00000026728	667 (aa)	-	-
ENSXCOT00000027056	-	1986	-	ENSXCOP00000026729	661 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000019963	-	90	39.968	ENSXCOG00000020590	-	87	48.387
ENSXCOG00000019963	-	88	31.052	ENSXCOG00000009420	adar	61	31.052
ENSXCOG00000019963	-	90	40.635	ENSXCOG00000014535	adarb1b	87	41.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019963	-	98	42.059	ENSG00000185736	ADARB2	89	42.059	Homo_sapiens
ENSXCOG00000019963	-	73	46.109	ENSAPOG00000000330	adarb2	86	43.141	Acanthochromis_polyacanthus
ENSXCOG00000019963	-	98	56.554	ENSAPOG00000007476	-	92	56.677	Acanthochromis_polyacanthus
ENSXCOG00000019963	-	98	41.829	ENSAMEG00000001942	ADARB2	92	41.829	Ailuropoda_melanoleuca
ENSXCOG00000019963	-	92	46.894	ENSACIG00000003609	adarb2	89	47.360	Amphilophus_citrinellus
ENSXCOG00000019963	-	99	56.671	ENSACIG00000018727	-	97	58.396	Amphilophus_citrinellus
ENSXCOG00000019963	-	95	58.065	ENSAOCG00000005591	-	95	58.065	Amphiprion_ocellaris
ENSXCOG00000019963	-	98	45.665	ENSAOCG00000009758	adarb2	88	45.809	Amphiprion_ocellaris
ENSXCOG00000019963	-	98	45.809	ENSAPEG00000006268	adarb2	88	46.243	Amphiprion_percula
ENSXCOG00000019963	-	71	58.571	ENSAPEG00000003048	-	66	58.239	Amphiprion_percula
ENSXCOG00000019963	-	92	47.327	ENSATEG00000022366	adarb2	84	48.814	Anabas_testudineus
ENSXCOG00000019963	-	97	60.850	ENSATEG00000012728	-	98	59.729	Anabas_testudineus
ENSXCOG00000019963	-	98	41.813	ENSAPLG00000012729	ADARB2	94	41.813	Anas_platyrhynchos
ENSXCOG00000019963	-	98	43.446	ENSACAG00000003231	ADARB2	84	43.446	Anolis_carolinensis
ENSXCOG00000019963	-	98	41.826	ENSANAG00000033136	ADARB2	90	41.973	Aotus_nancymaae
ENSXCOG00000019963	-	88	61.258	ENSACLG00000026322	-	85	61.258	Astatotilapia_calliptera
ENSXCOG00000019963	-	98	46.957	ENSACLG00000012724	adarb2	91	47.025	Astatotilapia_calliptera
ENSXCOG00000019963	-	98	44.135	ENSAMXG00000040561	adarb2	92	44.428	Astyanax_mexicanus
ENSXCOG00000019963	-	91	44.000	ENSBTAG00000014194	ADARB2	82	44.000	Bos_taurus
ENSXCOG00000019963	-	98	38.767	ENSCJAG00000008412	ADARB2	92	38.913	Callithrix_jacchus
ENSXCOG00000019963	-	64	42.500	ENSCAFG00000005516	-	89	42.500	Canis_familiaris
ENSXCOG00000019963	-	98	42.199	ENSCAFG00020004349	ADARB2	92	42.199	Canis_lupus_dingo
ENSXCOG00000019963	-	91	43.820	ENSCHIG00000002677	ADARB2	82	44.588	Capra_hircus
ENSXCOG00000019963	-	98	41.496	ENSCAPG00000009111	ADARB2	90	41.496	Cavia_aperea
ENSXCOG00000019963	-	98	41.642	ENSCPOG00000013893	ADARB2	90	41.642	Cavia_porcellus
ENSXCOG00000019963	-	64	43.848	ENSCCAG00000023030	ADARB2	86	43.468	Cebus_capucinus
ENSXCOG00000019963	-	98	41.813	ENSCATG00000033324	ADARB2	93	42.105	Cercocebus_atys
ENSXCOG00000019963	-	98	41.288	ENSCLAG00000004143	ADARB2	94	41.288	Chinchilla_lanigera
ENSXCOG00000019963	-	98	41.813	ENSCSAG00000014037	ADARB2	94	42.105	Chlorocebus_sabaeus
ENSXCOG00000019963	-	59	49.554	ENSCHOG00000003620	-	51	49.554	Choloepus_hoffmanni
ENSXCOG00000019963	-	98	42.899	ENSCPBG00000017055	ADARB2	97	42.899	Chrysemys_picta_bellii
ENSXCOG00000019963	-	98	42.035	ENSCANG00000041148	ADARB2	94	42.035	Colobus_angolensis_palliatus
ENSXCOG00000019963	-	98	40.703	ENSCGRG00001012519	Adarb2	90	40.816	Cricetulus_griseus_chok1gshd
ENSXCOG00000019963	-	98	40.703	ENSCGRG00000007814	Adarb2	90	40.816	Cricetulus_griseus_crigri
ENSXCOG00000019963	-	98	46.243	ENSCSEG00000012042	adarb2	92	47.368	Cynoglossus_semilaevis
ENSXCOG00000019963	-	99	64.253	ENSCVAG00000009369	-	98	64.688	Cyprinodon_variegatus
ENSXCOG00000019963	-	98	45.887	ENSCVAG00000000566	adarb2	90	45.887	Cyprinodon_variegatus
ENSXCOG00000019963	-	93	46.890	ENSDARG00000071823	adarb2	83	46.890	Danio_rerio
ENSXCOG00000019963	-	98	42.020	ENSDNOG00000000111	ADARB2	92	42.020	Dasypus_novemcinctus
ENSXCOG00000019963	-	98	42.113	ENSDORG00000005710	Adarb2	92	42.113	Dipodomys_ordii
ENSXCOG00000019963	-	87	44.538	ENSETEG00000017498	ADARB2	85	44.538	Echinops_telfairi
ENSXCOG00000019963	-	98	43.027	ENSEASG00005019093	ADARB2	94	43.027	Equus_asinus_asinus
ENSXCOG00000019963	-	98	42.963	ENSECAG00000014587	ADARB2	94	42.963	Equus_caballus
ENSXCOG00000019963	-	98	45.014	ENSELUG00000003379	adarb2	94	45.014	Esox_lucius
ENSXCOG00000019963	-	92	46.834	ENSELUG00000008478	ADARB2	80	46.834	Esox_lucius
ENSXCOG00000019963	-	91	43.333	ENSFCAG00000003296	ADARB2	82	43.333	Felis_catus
ENSXCOG00000019963	-	98	42.710	ENSFALG00000006993	ADARB2	92	42.710	Ficedula_albicollis
ENSXCOG00000019963	-	98	40.996	ENSFDAG00000012339	ADARB2	91	40.996	Fukomys_damarensis
ENSXCOG00000019963	-	95	69.749	ENSFHEG00000004579	-	94	67.273	Fundulus_heteroclitus
ENSXCOG00000019963	-	75	46.641	ENSGMOG00000016035	-	76	46.641	Gadus_morhua
ENSXCOG00000019963	-	61	58.511	ENSGMOG00000017835	adarb2	55	58.511	Gadus_morhua
ENSXCOG00000019963	-	98	42.020	ENSGALG00000006797	ADARB2	97	42.020	Gallus_gallus
ENSXCOG00000019963	-	98	88.752	ENSGAFG00000018614	-	99	87.597	Gambusia_affinis
ENSXCOG00000019963	-	82	47.929	ENSGAFG00000002060	adarb2	87	52.846	Gambusia_affinis
ENSXCOG00000019963	-	98	44.509	ENSGACG00000001798	adarb2	94	44.798	Gasterosteus_aculeatus
ENSXCOG00000019963	-	100	49.646	ENSGACG00000017477	-	92	50.495	Gasterosteus_aculeatus
ENSXCOG00000019963	-	98	42.353	ENSGGOG00000003165	ADARB2	91	42.353	Gorilla_gorilla
ENSXCOG00000019963	-	97	59.758	ENSHBUG00000007365	-	86	59.758	Haplochromis_burtoni
ENSXCOG00000019963	-	98	46.957	ENSHBUG00000001752	adarb2	94	46.734	Haplochromis_burtoni
ENSXCOG00000019963	-	89	42.248	ENSHGLG00000014550	ADARB2	89	42.248	Heterocephalus_glaber_female
ENSXCOG00000019963	-	98	41.460	ENSHGLG00100011502	ADARB2	90	41.460	Heterocephalus_glaber_male
ENSXCOG00000019963	-	92	46.445	ENSHCOG00000020344	adarb2	82	46.445	Hippocampus_comes
ENSXCOG00000019963	-	87	45.333	ENSIPUG00000000812	adarb2	82	45.485	Ictalurus_punctatus
ENSXCOG00000019963	-	98	42.020	ENSSTOG00000014329	ADARB2	90	42.020	Ictidomys_tridecemlineatus
ENSXCOG00000019963	-	98	41.728	ENSJJAG00000015849	Adarb2	90	41.728	Jaculus_jaculus
ENSXCOG00000019963	-	94	61.466	ENSKMAG00000000395	-	84	61.466	Kryptolebias_marmoratus
ENSXCOG00000019963	-	98	45.997	ENSLBEG00000028085	adarb2	90	45.997	Labrus_bergylta
ENSXCOG00000019963	-	99	58.003	ENSLBEG00000021671	-	94	58.003	Labrus_bergylta
ENSXCOG00000019963	-	98	45.586	ENSLOCG00000012249	adarb2	92	45.586	Lepisosteus_oculatus
ENSXCOG00000019963	-	98	43.338	ENSLAFG00000004361	ADARB2	94	43.338	Loxodonta_africana
ENSXCOG00000019963	-	98	42.206	ENSMFAG00000040865	ADARB2	93	42.206	Macaca_fascicularis
ENSXCOG00000019963	-	98	42.291	ENSMMUG00000017120	ADARB2	89	42.291	Macaca_mulatta
ENSXCOG00000019963	-	98	42.144	ENSMNEG00000040136	ADARB2	91	42.144	Macaca_nemestrina
ENSXCOG00000019963	-	98	42.291	ENSMLEG00000036075	ADARB2	93	42.291	Mandrillus_leucophaeus
ENSXCOG00000019963	-	84	48.881	ENSMAMG00000015084	adarb2	83	48.881	Mastacembelus_armatus
ENSXCOG00000019963	-	98	57.664	ENSMAMG00000013888	-	98	57.164	Mastacembelus_armatus
ENSXCOG00000019963	-	98	46.957	ENSMZEG00005017069	adarb2	89	47.025	Maylandia_zebra
ENSXCOG00000019963	-	97	57.121	ENSMZEG00005006722	-	90	58.581	Maylandia_zebra
ENSXCOG00000019963	-	98	42.020	ENSMGAG00000005556	ADARB2	94	42.020	Meleagris_gallopavo
ENSXCOG00000019963	-	98	41.288	ENSMAUG00000010346	Adarb2	92	41.288	Mesocricetus_auratus
ENSXCOG00000019963	-	98	35.639	ENSMICG00000047603	ADARB2	89	35.639	Microcebus_murinus
ENSXCOG00000019963	-	98	41.288	ENSMOCG00000011797	Adarb2	92	41.288	Microtus_ochrogaster
ENSXCOG00000019963	-	98	45.520	ENSMMOG00000005538	adarb2	93	45.954	Mola_mola
ENSXCOG00000019963	-	99	53.780	ENSMMOG00000011272	-	98	53.780	Mola_mola
ENSXCOG00000019963	-	88	43.709	ENSMODG00000006359	ADARB2	98	43.709	Monodelphis_domestica
ENSXCOG00000019963	-	97	59.607	ENSMALG00000012596	-	91	59.607	Monopterus_albus
ENSXCOG00000019963	-	86	46.990	ENSMALG00000017654	adarb2	82	46.990	Monopterus_albus
ENSXCOG00000019963	-	98	41.496	MGP_CAROLIEiJ_G0018212	Adarb2	90	41.496	Mus_caroli
ENSXCOG00000019963	-	98	41.349	ENSMUSG00000052551	Adarb2	90	41.349	Mus_musculus
ENSXCOG00000019963	-	98	41.288	MGP_PahariEiJ_G0019260	Adarb2	90	41.288	Mus_pahari
ENSXCOG00000019963	-	98	41.202	MGP_SPRETEiJ_G0019068	Adarb2	98	41.829	Mus_spretus
ENSXCOG00000019963	-	98	41.056	ENSMPUG00000016224	ADARB2	94	41.056	Mustela_putorius_furo
ENSXCOG00000019963	-	98	41.194	ENSMLUG00000013832	ADARB2	97	41.194	Myotis_lucifugus
ENSXCOG00000019963	-	98	41.168	ENSNGAG00000015119	Adarb2	90	41.168	Nannospalax_galili
ENSXCOG00000019963	-	97	55.472	ENSNBRG00000019879	-	94	55.472	Neolamprologus_brichardi
ENSXCOG00000019963	-	91	47.344	ENSNBRG00000013208	adarb2	90	47.812	Neolamprologus_brichardi
ENSXCOG00000019963	-	98	42.229	ENSMEUG00000008809	ADARB2	90	42.229	Notamacropus_eugenii
ENSXCOG00000019963	-	68	45.011	ENSOPRG00000009309	ADARB2	70	45.011	Ochotona_princeps
ENSXCOG00000019963	-	98	41.642	ENSODEG00000000345	ADARB2	90	41.642	Octodon_degus
ENSXCOG00000019963	-	100	57.205	ENSONIG00000017716	-	96	57.205	Oreochromis_niloticus
ENSXCOG00000019963	-	98	46.647	ENSONIG00000003634	adarb2	97	43.956	Oreochromis_niloticus
ENSXCOG00000019963	-	98	43.465	ENSOANG00000006089	ADARB2	97	42.655	Ornithorhynchus_anatinus
ENSXCOG00000019963	-	94	42.946	ENSOCUG00000004181	ADARB2	95	42.946	Oryctolagus_cuniculus
ENSXCOG00000019963	-	98	45.194	ENSORLG00000027340	adarb2	90	45.337	Oryzias_latipes
ENSXCOG00000019963	-	97	57.186	ENSORLG00000006209	-	99	54.665	Oryzias_latipes
ENSXCOG00000019963	-	100	55.182	ENSORLG00020020708	-	99	56.818	Oryzias_latipes_hni
ENSXCOG00000019963	-	98	45.194	ENSORLG00020007274	adarb2	90	45.194	Oryzias_latipes_hni
ENSXCOG00000019963	-	97	54.641	ENSORLG00015020288	-	94	54.641	Oryzias_latipes_hsok
ENSXCOG00000019963	-	98	45.050	ENSORLG00015003777	adarb2	90	45.194	Oryzias_latipes_hsok
ENSXCOG00000019963	-	97	56.042	ENSOMEG00000011377	-	93	55.909	Oryzias_melastigma
ENSXCOG00000019963	-	98	44.748	ENSOMEG00000019523	adarb2	93	45.036	Oryzias_melastigma
ENSXCOG00000019963	-	98	41.864	ENSOGAG00000007244	ADARB2	96	41.864	Otolemur_garnettii
ENSXCOG00000019963	-	98	40.212	ENSOARG00000014235	ADARB2	91	39.189	Ovis_aries
ENSXCOG00000019963	-	98	41.410	ENSPPAG00000039162	ADARB2	92	41.410	Pan_paniscus
ENSXCOG00000019963	-	91	43.226	ENSPPRG00000024307	ADARB2	82	43.226	Panthera_pardus
ENSXCOG00000019963	-	81	43.836	ENSPTRG00000002241	ADARB2	86	43.836	Pan_troglodytes
ENSXCOG00000019963	-	98	42.584	ENSPANG00000023536	ADARB2	93	42.584	Papio_anubis
ENSXCOG00000019963	-	99	44.650	ENSPKIG00000010135	adarb2	96	44.223	Paramormyrops_kingsleyae
ENSXCOG00000019963	-	99	43.983	ENSPKIG00000012103	ADARB2	94	43.983	Paramormyrops_kingsleyae
ENSXCOG00000019963	-	98	42.899	ENSPSIG00000005053	ADARB2	93	42.899	Pelodiscus_sinensis
ENSXCOG00000019963	-	92	48.885	ENSPMGG00000012587	adarb2	85	48.885	Periophthalmus_magnuspinnatus
ENSXCOG00000019963	-	98	40.996	ENSPEMG00000000370	Adarb2	92	40.996	Peromyscus_maniculatus_bairdii
ENSXCOG00000019963	-	98	46.032	ENSPFOG00000012905	adarb2	96	46.032	Poecilia_formosa
ENSXCOG00000019963	-	92	86.581	ENSPFOG00000000453	-	94	86.581	Poecilia_formosa
ENSXCOG00000019963	-	95	86.050	ENSPLAG00000009838	-	98	83.463	Poecilia_latipinna
ENSXCOG00000019963	-	98	46.098	ENSPLAG00000008995	adarb2	93	46.098	Poecilia_latipinna
ENSXCOG00000019963	-	96	46.456	ENSPMEG00000001204	adarb2	95	46.456	Poecilia_mexicana
ENSXCOG00000019963	-	100	86.466	ENSPREG00000020270	-	100	85.329	Poecilia_reticulata
ENSXCOG00000019963	-	98	46.408	ENSPREG00000006572	adarb2	91	46.310	Poecilia_reticulata
ENSXCOG00000019963	-	98	41.850	ENSPPYG00000002042	ADARB2	89	41.850	Pongo_abelii
ENSXCOG00000019963	-	77	41.917	ENSPCAG00000006510	ADARB2	70	41.917	Procavia_capensis
ENSXCOG00000019963	-	98	42.687	ENSPCOG00000015861	ADARB2	89	42.687	Propithecus_coquereli
ENSXCOG00000019963	-	79	41.667	ENSPVAG00000010042	ADARB2	71	41.667	Pteropus_vampyrus
ENSXCOG00000019963	-	100	52.991	ENSPNYG00000024249	ADARB2	98	52.991	Pundamilia_nyererei
ENSXCOG00000019963	-	98	46.812	ENSPNYG00000024203	adarb2	89	46.880	Pundamilia_nyererei
ENSXCOG00000019963	-	98	43.796	ENSPNAG00000030072	adarb2	94	43.695	Pygocentrus_nattereri
ENSXCOG00000019963	-	98	41.288	ENSRNOG00000030775	Adarb2	94	41.288	Rattus_norvegicus
ENSXCOG00000019963	-	98	41.973	ENSRBIG00000035193	ADARB2	92	41.606	Rhinopithecus_bieti
ENSXCOG00000019963	-	98	41.997	ENSRROG00000001169	ADARB2	92	41.997	Rhinopithecus_roxellana
ENSXCOG00000019963	-	87	50.407	ENSSBOG00000027116	ADARB2	81	50.407	Saimiri_boliviensis_boliviensis
ENSXCOG00000019963	-	98	42.962	ENSSHAG00000015652	ADARB2	98	42.962	Sarcophilus_harrisii
ENSXCOG00000019963	-	90	42.633	ENSSFOG00015014917	adarb2	91	42.633	Scleropages_formosus
ENSXCOG00000019963	-	98	42.235	ENSSFOG00015004693	ADARB2	98	42.380	Scleropages_formosus
ENSXCOG00000019963	-	99	56.528	ENSSMAG00000005263	-	95	57.122	Scophthalmus_maximus
ENSXCOG00000019963	-	92	48.195	ENSSMAG00000002201	adarb2	79	49.490	Scophthalmus_maximus
ENSXCOG00000019963	-	100	57.368	ENSSDUG00000005753	-	99	58.079	Seriola_dumerili
ENSXCOG00000019963	-	91	46.749	ENSSDUG00000004719	adarb2	91	46.749	Seriola_dumerili
ENSXCOG00000019963	-	91	46.904	ENSSLDG00000007961	adarb2	91	46.904	Seriola_lalandi_dorsalis
ENSXCOG00000019963	-	100	57.797	ENSSLDG00000000219	-	99	57.305	Seriola_lalandi_dorsalis
ENSXCOG00000019963	-	99	57.312	ENSSPAG00000009296	-	98	57.508	Stegastes_partitus
ENSXCOG00000019963	-	98	45.520	ENSSPAG00000017554	adarb2	90	45.954	Stegastes_partitus
ENSXCOG00000019963	-	93	44.479	ENSSSCG00000011160	ADARB2	93	43.027	Sus_scrofa
ENSXCOG00000019963	-	98	41.935	ENSTGUG00000000848	ADARB2	94	41.935	Taeniopygia_guttata
ENSXCOG00000019963	-	91	44.582	ENSTRUG00000010848	adarb2	83	46.508	Takifugu_rubripes
ENSXCOG00000019963	-	92	47.161	ENSTNIG00000008728	adarb2	86	47.161	Tetraodon_nigroviridis
ENSXCOG00000019963	-	92	49.681	ENSTNIG00000007994	-	98	49.289	Tetraodon_nigroviridis
ENSXCOG00000019963	-	89	43.725	ENSTBEG00000005688	ADARB2	81	43.725	Tupaia_belangeri
ENSXCOG00000019963	-	91	40.320	ENSTTRG00000011179	ADARB2	82	40.320	Tursiops_truncatus
ENSXCOG00000019963	-	98	41.940	ENSVVUG00000008465	ADARB2	90	41.940	Vulpes_vulpes
ENSXCOG00000019963	-	98	39.291	ENSXETG00000018065	adarb2	97	38.859	Xenopus_tropicalis
ENSXCOG00000019963	-	98	45.887	ENSXMAG00000004645	adarb2	93	45.780	Xiphophorus_maculatus
ENSXCOG00000019963	-	100	93.443	ENSXMAG00000006770	-	100	93.443	Xiphophorus_maculatus