EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000019991 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3058 bases
Position: chrKQ557221.1:28851804-28854861
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026763	Ribonuc_P_40	PF08584.11	8.1e-41	1	2
ENSXCOP00000026763	Ribonuc_P_40	PF08584.11	8.1e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027092	-	1041	-	ENSXCOP00000026763	346 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000019991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000019991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000019991	-	93	30.838	ENSG00000124787	RPP40	63	43.307	Homo_sapiens
ENSXCOG00000019991	-	88	31.429	ENSAMEG00000012938	RPP40	57	42.424	Ailuropoda_melanoleuca
ENSXCOG00000019991	-	89	42.982	ENSACIG00000003617	rpp40	60	62.500	Amphilophus_citrinellus
ENSXCOG00000019991	-	89	31.366	ENSANAG00000029246	RPP40	63	41.732	Aotus_nancymaae
ENSXCOG00000019991	-	80	33.962	ENSAMXG00000001755	rpp40	53	49.524	Astyanax_mexicanus
ENSXCOG00000019991	-	87	32.295	ENSBTAG00000003332	RPP40	94	30.028	Bos_taurus
ENSXCOG00000019991	-	89	31.402	ENSCJAG00000021373	RPP40	63	42.520	Callithrix_jacchus
ENSXCOG00000019991	-	87	31.609	ENSCAFG00000009435	RPP40	57	41.985	Canis_familiaris
ENSXCOG00000019991	-	87	31.609	ENSCAFG00020013380	RPP40	57	41.985	Canis_lupus_dingo
ENSXCOG00000019991	-	87	32.277	ENSCHIG00000016849	RPP40	57	52.381	Capra_hircus
ENSXCOG00000019991	-	86	32.075	ENSTSYG00000032857	RPP40	54	49.383	Carlito_syrichta
ENSXCOG00000019991	-	80	31.269	ENSCPOG00000005855	RPP40	52	47.170	Cavia_porcellus
ENSXCOG00000019991	-	89	31.402	ENSCCAG00000019809	RPP40	63	42.520	Cebus_capucinus
ENSXCOG00000019991	-	93	30.233	ENSCATG00000038787	RPP40	67	40.288	Cercocebus_atys
ENSXCOG00000019991	-	87	30.172	ENSCLAG00000003235	RPP40	57	40.458	Chinchilla_lanigera
ENSXCOG00000019991	-	89	31.268	ENSCSAG00000007307	RPP40	59	42.029	Chlorocebus_sabaeus
ENSXCOG00000019991	-	63	42.446	ENSCPBG00000009003	RPP40	56	43.411	Chrysemys_picta_bellii
ENSXCOG00000019991	-	93	30.233	ENSCANG00000033965	RPP40	66	41.912	Colobus_angolensis_palliatus
ENSXCOG00000019991	-	66	41.958	ENSCGRG00001018328	Rpp40	59	38.961	Cricetulus_griseus_chok1gshd
ENSXCOG00000019991	-	66	41.958	ENSCGRG00000011344	Rpp40	53	44.262	Cricetulus_griseus_crigri
ENSXCOG00000019991	-	58	51.429	ENSDARG00000017605	rpp40	52	51.923	Danio_rerio
ENSXCOG00000019991	-	58	41.667	ENSEBUG00000000386	rpp40	54	47.423	Eptatretus_burgeri
ENSXCOG00000019991	-	87	32.710	ENSFCAG00000009249	RPP40	93	32.087	Felis_catus
ENSXCOG00000019991	-	53	45.098	ENSFALG00000013166	RPP40	54	46.809	Ficedula_albicollis
ENSXCOG00000019991	-	87	30.659	ENSFDAG00000013001	-	57	40.458	Fukomys_damarensis
ENSXCOG00000019991	-	63	75.758	ENSFHEG00000021429	rpp40	57	75.758	Fundulus_heteroclitus
ENSXCOG00000019991	-	57	43.860	ENSGALG00000036074	RPP40	54	44.248	Gallus_gallus
ENSXCOG00000019991	-	74	66.304	ENSGAFG00000004189	-	63	97.647	Gambusia_affinis
ENSXCOG00000019991	-	86	30.925	ENSGAGG00000012918	RPP40	58	43.411	Gopherus_agassizii
ENSXCOG00000019991	-	93	30.838	ENSGGOG00000013764	RPP40	63	43.307	Gorilla_gorilla
ENSXCOG00000019991	-	50	71.560	ENSHBUG00000009378	rpp40	53	71.296	Haplochromis_burtoni
ENSXCOG00000019991	-	87	30.659	ENSHGLG00000004871	RPP40	57	41.985	Heterocephalus_glaber_female
ENSXCOG00000019991	-	87	30.659	ENSHGLG00100002080	RPP40	57	41.985	Heterocephalus_glaber_male
ENSXCOG00000019991	-	59	43.925	ENSIPUG00000008951	RPP40	54	44.340	Ictalurus_punctatus
ENSXCOG00000019991	-	66	42.105	ENSSTOG00000011199	RPP40	57	41.667	Ictidomys_tridecemlineatus
ENSXCOG00000019991	-	63	41.463	ENSJJAG00000020629	Rpp40	54	40.984	Jaculus_jaculus
ENSXCOG00000019991	-	58	60.606	ENSLBEG00000022724	rpp40	56	60.606	Labrus_bergylta
ENSXCOG00000019991	-	61	43.411	ENSLACG00000014848	RPP40	57	43.411	Latimeria_chalumnae
ENSXCOG00000019991	-	52	43.269	ENSLAFG00000007530	RPP40	54	48.148	Loxodonta_africana
ENSXCOG00000019991	-	93	30.838	ENSMFAG00000043100	RPP40	66	41.912	Macaca_fascicularis
ENSXCOG00000019991	-	93	30.838	ENSMMUG00000004966	RPP40	66	41.912	Macaca_mulatta
ENSXCOG00000019991	-	93	30.233	ENSMNEG00000041986	RPP40	63	43.307	Macaca_nemestrina
ENSXCOG00000019991	-	55	47.664	ENSMGAG00000004009	RPP40	53	48.113	Meleagris_gallopavo
ENSXCOG00000019991	-	93	30.211	ENSMAUG00000010268	Rpp40	69	38.849	Mesocricetus_auratus
ENSXCOG00000019991	-	87	31.546	ENSMICG00000003297	RPP40	59	40.909	Microcebus_murinus
ENSXCOG00000019991	-	70	40.994	ENSMOCG00000000305	Rpp40	54	43.478	Microtus_ochrogaster
ENSXCOG00000019991	-	85	30.882	ENSMODG00000009826	RPP40	54	44.262	Monodelphis_domestica
ENSXCOG00000019991	-	50	73.832	ENSMALG00000020133	rpp40	55	75.238	Monopterus_albus
ENSXCOG00000019991	-	86	32.174	MGP_CAROLIEiJ_G0018429	Rpp40	77	39.062	Mus_caroli
ENSXCOG00000019991	-	86	30.966	ENSMUSG00000021418	Rpp40	76	39.062	Mus_musculus
ENSXCOG00000019991	-	86	31.884	MGP_PahariEiJ_G0019497	Rpp40	77	39.062	Mus_pahari
ENSXCOG00000019991	-	86	32.174	MGP_SPRETEiJ_G0019309	Rpp40	77	39.062	Mus_spretus
ENSXCOG00000019991	-	86	32.768	ENSMLUG00000000501	RPP40	59	44.928	Myotis_lucifugus
ENSXCOG00000019991	-	88	30.659	ENSNGAG00000023955	-	57	41.667	Nannospalax_galili
ENSXCOG00000019991	-	93	30.925	ENSNLEG00000034397	RPP40	63	44.094	Nomascus_leucogenys
ENSXCOG00000019991	-	88	30.508	ENSOCUG00000000354	RPP40	53	44.444	Oryctolagus_cuniculus
ENSXCOG00000019991	-	69	41.722	ENSOGAG00000006055	RPP40	56	44.531	Otolemur_garnettii
ENSXCOG00000019991	-	80	31.692	ENSOARG00000018783	RPP40	57	53.571	Ovis_aries
ENSXCOG00000019991	-	93	30.294	ENSPPAG00000023703	RPP40	63	42.520	Pan_paniscus
ENSXCOG00000019991	-	87	32.399	ENSPPRG00000005612	RPP40	93	31.776	Panthera_pardus
ENSXCOG00000019991	-	70	39.610	ENSPTIG00000018847	RPP40	55	44.167	Panthera_tigris_altaica
ENSXCOG00000019991	-	93	30.539	ENSPTRG00000017690	RPP40	63	42.520	Pan_troglodytes
ENSXCOG00000019991	-	93	30.814	ENSPANG00000017865	RPP40	67	41.007	Papio_anubis
ENSXCOG00000019991	-	54	42.991	ENSPKIG00000006311	rpp40	52	43.396	Paramormyrops_kingsleyae
ENSXCOG00000019991	-	85	31.268	ENSPCIG00000010682	RPP40	55	45.082	Phascolarctos_cinereus
ENSXCOG00000019991	-	60	81.333	ENSPFOG00000011460	rpp40	56	81.333	Poecilia_formosa
ENSXCOG00000019991	-	60	82.667	ENSPLAG00000001334	rpp40	56	82.667	Poecilia_latipinna
ENSXCOG00000019991	-	60	81.333	ENSPMEG00000007721	rpp40	56	81.746	Poecilia_mexicana
ENSXCOG00000019991	-	60	84.000	ENSPREG00000009215	rpp40	56	84.000	Poecilia_reticulata
ENSXCOG00000019991	-	72	38.509	ENSPPYG00000016194	RPP40	59	40.580	Pongo_abelii
ENSXCOG00000019991	-	87	31.613	ENSPCOG00000003907	RPP40	64	41.985	Propithecus_coquereli
ENSXCOG00000019991	-	87	30.747	ENSPVAG00000011325	RPP40	55	41.985	Pteropus_vampyrus
ENSXCOG00000019991	-	69	43.046	ENSRNOG00000016226	Rpp40	54	54.321	Rattus_norvegicus
ENSXCOG00000019991	-	89	31.707	ENSRBIG00000035800	RPP40	67	40.288	Rhinopithecus_bieti
ENSXCOG00000019991	-	89	31.707	ENSRROG00000039116	RPP40	67	40.288	Rhinopithecus_roxellana
ENSXCOG00000019991	-	89	31.677	ENSSBOG00000020297	RPP40	63	42.520	Saimiri_boliviensis_boliviensis
ENSXCOG00000019991	-	66	31.022	ENSSHAG00000002102	RPP40	51	57.895	Sarcophilus_harrisii
ENSXCOG00000019991	-	80	32.632	ENSSPUG00000017487	-	58	47.573	Sphenodon_punctatus
ENSXCOG00000019991	-	87	31.988	ENSSSCG00000000998	RPP40	62	43.333	Sus_scrofa
ENSXCOG00000019991	-	58	44.628	ENSTGUG00000002258	-	55	46.018	Taeniopygia_guttata
ENSXCOG00000019991	-	52	73.684	ENSTRUG00000003755	rpp40	55	61.644	Takifugu_rubripes
ENSXCOG00000019991	-	61	56.164	ENSTNIG00000003077	rpp40	55	56.164	Tetraodon_nigroviridis
ENSXCOG00000019991	-	87	31.232	ENSUAMG00000002159	RPP40	54	50.617	Ursus_americanus
ENSXCOG00000019991	-	87	31.232	ENSUMAG00000018639	RPP40	51	44.167	Ursus_maritimus
ENSXCOG00000019991	-	87	31.897	ENSVVUG00000005451	RPP40	57	41.985	Vulpes_vulpes
ENSXCOG00000019991	-	86	55.660	ENSXMAG00000024940	rpp40	57	92.000	Xiphophorus_maculatus