EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000020061 (Gene tree)
Gene ID
-
Gene Symbol
atxn1a
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1a
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
7093 bases
Position
chrKQ557205.1:12740064-12747156
Accession
ZDB-GENE-060503-759
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000026860AXHPF08517.121.7e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000027189-2244-ENSXCOP00000026860747 (aa)--
Gene Model
Click here to download ENSXCOG00000020061's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020061's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000020061atxn1a9939.549ENSXCOG00000019714atxn1b9840.050
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000020061atxn1a9049.818ENSG00000124788ATXN16249.815Homo_sapiens
ENSXCOG00000020061atxn1a10073.472ENSAPOG00000018662atxn1a10072.983Acanthochromis_polyacanthus
ENSXCOG00000020061atxn1a9937.071ENSAPOG00000005003atxn1b9938.373Acanthochromis_polyacanthus
ENSXCOG00000020061atxn1a10041.696ENSAMEG00000004299ATXN110041.114Ailuropoda_melanoleuca
ENSXCOG00000020061atxn1a10072.108ENSACIG00000016088atxn1a10072.108Amphilophus_citrinellus
ENSXCOG00000020061atxn1a9938.209ENSACIG00000014661atxn1b9838.847Amphilophus_citrinellus
ENSXCOG00000020061atxn1a10074.020ENSAOCG00000015796atxn1a10073.529Amphiprion_ocellaris
ENSXCOG00000020061atxn1a9937.486ENSAOCG00000019715atxn1b9939.145Amphiprion_ocellaris
ENSXCOG00000020061atxn1a9936.812ENSAPEG00000022436atxn1b9938.462Amphiprion_percula
ENSXCOG00000020061atxn1a10074.265ENSAPEG00000011313atxn1a10073.775Amphiprion_percula
ENSXCOG00000020061atxn1a10069.841ENSATEG00000013601atxn1a10069.231Anabas_testudineus
ENSXCOG00000020061atxn1a9937.931ENSATEG00000002982atxn1b9938.286Anabas_testudineus
ENSXCOG00000020061atxn1a10041.198ENSACAG00000003919ATXN110041.283Anolis_carolinensis
ENSXCOG00000020061atxn1a9941.901ENSANAG00000025206-9542.230Aotus_nancymaae
ENSXCOG00000020061atxn1a8237.374ENSANAG00000025424-9637.536Aotus_nancymaae
ENSXCOG00000020061atxn1a10073.497ENSACLG00000015429atxn1a10073.497Astatotilapia_calliptera
ENSXCOG00000020061atxn1a9935.520ENSACLG00000005697atxn1b9935.900Astatotilapia_calliptera
ENSXCOG00000020061atxn1a10050.875ENSAMXG00000042368atxn1a10051.122Astyanax_mexicanus
ENSXCOG00000020061atxn1a9935.868ENSAMXG00000017432atxn1b8537.500Astyanax_mexicanus
ENSXCOG00000020061atxn1a10041.529ENSBTAG00000019675ATXN110041.170Bos_taurus
ENSXCOG00000020061atxn1a9941.784ENSCJAG00000006563ATXN19442.112Callithrix_jacchus
ENSXCOG00000020061atxn1a10042.687ENSCAFG00000009934ATXN110042.212Canis_familiaris
ENSXCOG00000020061atxn1a9942.449ENSCAFG00020012647ATXN19541.855Canis_lupus_dingo
ENSXCOG00000020061atxn1a10041.044ENSCHIG00000018697ATXN110041.281Capra_hircus
ENSXCOG00000020061atxn1a5759.804ENSTSYG00000000858ATXN18759.804Carlito_syrichta
ENSXCOG00000020061atxn1a10042.180ENSCAPG00000013095ATXN110041.518Cavia_aperea
ENSXCOG00000020061atxn1a10042.464ENSCPOG00000022869ATXN110041.796Cavia_porcellus
ENSXCOG00000020061atxn1a10041.920ENSCCAG00000018590ATXN110041.920Cebus_capucinus
ENSXCOG00000020061atxn1a10041.540ENSCATG00000042777ATXN110041.981Cercocebus_atys
ENSXCOG00000020061atxn1a10042.363ENSCLAG00000002212ATXN110042.005Chinchilla_lanigera
ENSXCOG00000020061atxn1a10041.637ENSCSAG00000007589ATXN110041.962Chlorocebus_sabaeus
ENSXCOG00000020061atxn1a10042.193ENSCPBG00000022373ATXN110041.330Chrysemys_picta_bellii
ENSXCOG00000020061atxn1a10041.833ENSCANG00000033673ATXN110042.043Colobus_angolensis_palliatus
ENSXCOG00000020061atxn1a10041.893ENSCGRG00001022108Atxn110041.766Cricetulus_griseus_chok1gshd
ENSXCOG00000020061atxn1a10042.294ENSCGRG00000014084Atxn110042.169Cricetulus_griseus_crigri
ENSXCOG00000020061atxn1a9940.000ENSCSEG00000004666atxn1b9941.544Cynoglossus_semilaevis
ENSXCOG00000020061atxn1a10063.462ENSCSEG00000017647atxn1a10063.285Cynoglossus_semilaevis
ENSXCOG00000020061atxn1a9936.723ENSCVAG00000010945atxn1b9938.165Cyprinodon_variegatus
ENSXCOG00000020061atxn1a10082.456ENSCVAG00000023240atxn1a10082.456Cyprinodon_variegatus
ENSXCOG00000020061atxn1a10050.122ENSDARG00000061687atxn1a10050.243Danio_rerio
ENSXCOG00000020061atxn1a9936.854ENSDARG00000060862atxn1b9937.528Danio_rerio
ENSXCOG00000020061atxn1a5056.608ENSDNOG00000048471ATXN16056.858Dasypus_novemcinctus
ENSXCOG00000020061atxn1a8855.496ENSDORG00000005940Atxn19455.496Dipodomys_ordii
ENSXCOG00000020061atxn1a8555.621ENSETEG00000003815ATXN18657.062Echinops_telfairi
ENSXCOG00000020061atxn1a10042.431ENSEASG00005011799ATXN110042.482Equus_asinus_asinus
ENSXCOG00000020061atxn1a10042.431ENSECAG00000009251ATXN110042.482Equus_caballus
ENSXCOG00000020061atxn1a10041.803ENSEEUG00000007120ATXN110042.005Erinaceus_europaeus
ENSXCOG00000020061atxn1a9263.043ENSELUG00000001311atxn1b7163.043Esox_lucius
ENSXCOG00000020061atxn1a9947.423ENSELUG00000003691atxn1a9648.136Esox_lucius
ENSXCOG00000020061atxn1a10041.246ENSFCAG00000011298ATXN110041.928Felis_catus
ENSXCOG00000020061atxn1a10043.062ENSFALG00000013400ATXN110042.703Ficedula_albicollis
ENSXCOG00000020061atxn1a8556.391ENSFDAG00000020905ATXN19856.250Fukomys_damarensis
ENSXCOG00000020061atxn1a10082.272ENSFHEG00000019419atxn1a10081.648Fundulus_heteroclitus
ENSXCOG00000020061atxn1a9936.860ENSFHEG00000017226atxn1b9937.472Fundulus_heteroclitus
ENSXCOG00000020061atxn1a9936.638ENSGMOG00000013508atxn1b9937.576Gadus_morhua
ENSXCOG00000020061atxn1a10042.959ENSGALG00000012709ATXN110042.671Gallus_gallus
ENSXCOG00000020061atxn1a10090.250ENSGAFG00000010544atxn1a10090.250Gambusia_affinis
ENSXCOG00000020061atxn1a9938.128ENSGAFG00000007295atxn1b9938.991Gambusia_affinis
ENSXCOG00000020061atxn1a10058.714ENSGACG00000003472atxn1a10057.726Gasterosteus_aculeatus
ENSXCOG00000020061atxn1a9939.506ENSGACG00000008747atxn1b9939.702Gasterosteus_aculeatus
ENSXCOG00000020061atxn1a10041.836ENSGAGG00000006868ATXN110041.836Gopherus_agassizii
ENSXCOG00000020061atxn1a6949.818ENSGGOG00000004169ATXN110041.343Gorilla_gorilla
ENSXCOG00000020061atxn1a10073.374ENSHBUG00000002508atxn1a10073.374Haplochromis_burtoni
ENSXCOG00000020061atxn1a9935.407ENSHBUG00000016081atxn1b9935.787Haplochromis_burtoni
ENSXCOG00000020061atxn1a10042.299ENSHGLG00000009360ATXN110041.727Heterocephalus_glaber_female
ENSXCOG00000020061atxn1a10042.299ENSHGLG00100003038ATXN110041.727Heterocephalus_glaber_male
ENSXCOG00000020061atxn1a10038.508ENSHCOG00000014835atxn1b9939.448Hippocampus_comes
ENSXCOG00000020061atxn1a10054.523ENSHCOG00000019032atxn1a10054.020Hippocampus_comes
ENSXCOG00000020061atxn1a9939.261ENSIPUG00000002088atxn1b9938.506Ictalurus_punctatus
ENSXCOG00000020061atxn1a10049.091ENSIPUG00000001402atxn110048.727Ictalurus_punctatus
ENSXCOG00000020061atxn1a10040.845ENSSTOG00000025423ATXN110040.833Ictidomys_tridecemlineatus
ENSXCOG00000020061atxn1a10042.461ENSJJAG00000000377Atxn110041.787Jaculus_jaculus
ENSXCOG00000020061atxn1a9937.801ENSKMAG00000013507atxn1b9938.030Kryptolebias_marmoratus
ENSXCOG00000020061atxn1a10072.996ENSKMAG00000007216atxn1a10072.503Kryptolebias_marmoratus
ENSXCOG00000020061atxn1a10039.506ENSLBEG00000024264atxn1b9939.753Labrus_bergylta
ENSXCOG00000020061atxn1a10068.204ENSLBEG00000024388atxn1a10069.174Labrus_bergylta
ENSXCOG00000020061atxn1a10042.960ENSLACG00000005371ATXN110042.754Latimeria_chalumnae
ENSXCOG00000020061atxn1a10050.305ENSLOCG00000002910atxn1a10050.916Lepisosteus_oculatus
ENSXCOG00000020061atxn1a10043.636ENSLAFG00000015231ATXN110042.206Loxodonta_africana
ENSXCOG00000020061atxn1a10041.444ENSMFAG00000032779ATXN110041.825Macaca_fascicularis
ENSXCOG00000020061atxn1a10041.560ENSMMUG00000002940ATXN110041.943Macaca_mulatta
ENSXCOG00000020061atxn1a10041.540ENSMNEG00000036667ATXN110041.981Macaca_nemestrina
ENSXCOG00000020061atxn1a6950.000ENSMLEG00000040480ATXN18653.846Mandrillus_leucophaeus
ENSXCOG00000020061atxn1a10071.689ENSMAMG00000014004atxn1a10071.081Mastacembelus_armatus
ENSXCOG00000020061atxn1a9371.111ENSMAMG00000011503atxn1b8571.111Mastacembelus_armatus
ENSXCOG00000020061atxn1a9935.520ENSMZEG00005015064atxn1b9935.900Maylandia_zebra
ENSXCOG00000020061atxn1a10073.497ENSMZEG00005003602atxn1a10073.497Maylandia_zebra
ENSXCOG00000020061atxn1a10041.568ENSMGAG00000003028ATXN110040.974Meleagris_gallopavo
ENSXCOG00000020061atxn1a10042.086ENSMAUG00000011491Atxn110041.966Mesocricetus_auratus
ENSXCOG00000020061atxn1a10042.317ENSMICG00000011875ATXN110041.745Microcebus_murinus
ENSXCOG00000020061atxn1a10042.548ENSMOCG00000001527Atxn110042.617Microtus_ochrogaster
ENSXCOG00000020061atxn1a9940.534ENSMMOG00000002884atxn1b9940.050Mola_mola
ENSXCOG00000020061atxn1a10069.068ENSMMOG00000018593atxn1a10069.938Mola_mola
ENSXCOG00000020061atxn1a10043.044ENSMODG00000010827ATXN110042.449Monodelphis_domestica
ENSXCOG00000020061atxn1a10070.195ENSMALG00000005209atxn1a10070.438Monopterus_albus
ENSXCOG00000020061atxn1a9671.111ENSMALG00000012137atxn1b8971.111Monopterus_albus
ENSXCOG00000020061atxn1a10042.874MGP_CAROLIEiJ_G0018479Atxn110042.581Mus_caroli
ENSXCOG00000020061atxn1a10042.874ENSMUSG00000046876Atxn110042.581Mus_musculus
ENSXCOG00000020061atxn1a10042.823MGP_PahariEiJ_G0019546Atxn110042.702Mus_pahari
ENSXCOG00000020061atxn1a10042.410MGP_SPRETEiJ_G0019357Atxn110042.289Mus_spretus
ENSXCOG00000020061atxn1a10043.144ENSMPUG00000005398ATXN110042.568Mustela_putorius_furo
ENSXCOG00000020061atxn1a10042.294ENSMLUG00000000896ATXN110041.935Myotis_lucifugus
ENSXCOG00000020061atxn1a10043.097ENSNGAG00000020481Atxn110041.766Nannospalax_galili
ENSXCOG00000020061atxn1a10073.006ENSNBRG00000013216atxn1a10073.407Neolamprologus_brichardi
ENSXCOG00000020061atxn1a9938.221ENSNBRG00000014776atxn1b9838.625Neolamprologus_brichardi
ENSXCOG00000020061atxn1a10041.424ENSNLEG00000001064ATXN110041.509Nomascus_leucogenys
ENSXCOG00000020061atxn1a9939.904ENSMEUG00000014680ATXN19638.942Notamacropus_eugenii
ENSXCOG00000020061atxn1a10040.931ENSOPRG00000004813ATXN16449.722Ochotona_princeps
ENSXCOG00000020061atxn1a10041.844ENSODEG00000006297ATXN110041.371Octodon_degus
ENSXCOG00000020061atxn1a9938.889ENSONIG00000003094atxn1b9939.683Oreochromis_niloticus
ENSXCOG00000020061atxn1a9135.616ENSOANG00000011866ATXN16841.113Ornithorhynchus_anatinus
ENSXCOG00000020061atxn1a10041.487ENSOCUG00000015360ATXN110041.056Oryctolagus_cuniculus
ENSXCOG00000020061atxn1a10067.618ENSORLG00000013003atxn1a9966.998Oryzias_latipes
ENSXCOG00000020061atxn1a9937.860ENSORLG00000008288atxn1b9938.657Oryzias_latipes
ENSXCOG00000020061atxn1a9938.018ENSORLG00020013514atxn1b9938.728Oryzias_latipes_hni
ENSXCOG00000020061atxn1a10067.494ENSORLG00020006722atxn1a9966.749Oryzias_latipes_hni
ENSXCOG00000020061atxn1a10067.618ENSORLG00015014668atxn1a9966.873Oryzias_latipes_hsok
ENSXCOG00000020061atxn1a9938.921ENSORLG00015019876atxn1b9939.005Oryzias_latipes_hsok
ENSXCOG00000020061atxn1a9938.960ENSOMEG00000003259atxn1b9939.191Oryzias_melastigma
ENSXCOG00000020061atxn1a10066.874ENSOMEG00000012883atxn1a9867.372Oryzias_melastigma
ENSXCOG00000020061atxn1a9941.489ENSOGAG00000028623ATXN110041.786Otolemur_garnettii
ENSXCOG00000020061atxn1a6947.378ENSOARG00000012141ATXN17545.183Ovis_aries
ENSXCOG00000020061atxn1a9049.818ENSPPAG00000028993ATXN110041.452Pan_paniscus
ENSXCOG00000020061atxn1a10045.990ENSPPRG00000004547ATXN19545.990Panthera_pardus
ENSXCOG00000020061atxn1a6949.818ENSPTRG00000039250ATXN110041.363Pan_troglodytes
ENSXCOG00000020061atxn1a9941.589ENSPANG00000024249ATXN19941.962Papio_anubis
ENSXCOG00000020061atxn1a10047.428ENSPKIG00000003054atxn1a10047.434Paramormyrops_kingsleyae
ENSXCOG00000020061atxn1a10043.735ENSPKIG00000018323atxn1b10044.988Paramormyrops_kingsleyae
ENSXCOG00000020061atxn1a8136.607ENSPSIG00000007158ATXN19536.607Pelodiscus_sinensis
ENSXCOG00000020061atxn1a10051.658ENSPMGG00000022926atxn1a8058.560Periophthalmus_magnuspinnatus
ENSXCOG00000020061atxn1a9939.390ENSPMGG00000013610atxn1b9940.025Periophthalmus_magnuspinnatus
ENSXCOG00000020061atxn1a10042.055ENSPEMG00000014930Atxn110041.766Peromyscus_maniculatus_bairdii
ENSXCOG00000020061atxn1a10042.738ENSPCIG00000019413ATXN110041.905Phascolarctos_cinereus
ENSXCOG00000020061atxn1a10090.500ENSPFOG00000014422atxn1a10090.500Poecilia_formosa
ENSXCOG00000020061atxn1a10090.897ENSPLAG00000018978atxn1a10090.897Poecilia_latipinna
ENSXCOG00000020061atxn1a9939.444ENSPLAG00000018703atxn1b9839.925Poecilia_latipinna
ENSXCOG00000020061atxn1a10090.250ENSPMEG00000002647atxn1a10090.250Poecilia_mexicana
ENSXCOG00000020061atxn1a9936.686ENSPMEG00000023723atxn1b9938.497Poecilia_mexicana
ENSXCOG00000020061atxn1a9938.594ENSPREG00000020308atxn1b9938.838Poecilia_reticulata
ENSXCOG00000020061atxn1a10089.500ENSPREG00000008333atxn1a10089.500Poecilia_reticulata
ENSXCOG00000020061atxn1a10041.244ENSPPYG00000016254ATXN110041.452Pongo_abelii
ENSXCOG00000020061atxn1a5659.829ENSPCAG00000008196ATXN15059.829Procavia_capensis
ENSXCOG00000020061atxn1a10042.280ENSPCOG00000013612ATXN110041.844Propithecus_coquereli
ENSXCOG00000020061atxn1a8947.985ENSPVAG00000016937ATXN17947.794Pteropus_vampyrus
ENSXCOG00000020061atxn1a10073.252ENSPNYG00000011920atxn1a10073.252Pundamilia_nyererei
ENSXCOG00000020061atxn1a9937.719ENSPNYG00000017095atxn1b9838.250Pundamilia_nyererei
ENSXCOG00000020061atxn1a10052.833ENSPNAG00000010587atxn1a10052.956Pygocentrus_nattereri
ENSXCOG00000020061atxn1a9936.583ENSPNAG00000001226atxn1b9937.701Pygocentrus_nattereri
ENSXCOG00000020061atxn1a10042.193ENSRNOG00000016998Atxn110041.786Rattus_norvegicus
ENSXCOG00000020061atxn1a10041.395ENSRBIG00000028213ATXN110041.893Rhinopithecus_bieti
ENSXCOG00000020061atxn1a10041.754ENSRROG00000032751ATXN110042.024Rhinopithecus_roxellana
ENSXCOG00000020061atxn1a7936.321ENSSBOG00000030307-8835.294Saimiri_boliviensis_boliviensis
ENSXCOG00000020061atxn1a10041.920ENSSBOG00000017381-6350.369Saimiri_boliviensis_boliviensis
ENSXCOG00000020061atxn1a10044.076ENSSFOG00015000179atxn1b10044.076Scleropages_formosus
ENSXCOG00000020061atxn1a10050.560ENSSFOG00015005189atxn110050.809Scleropages_formosus
ENSXCOG00000020061atxn1a9970.726ENSSMAG00000007731atxn1a9470.603Scophthalmus_maximus
ENSXCOG00000020061atxn1a9369.565ENSSMAG00000019621atxn1b8569.565Scophthalmus_maximus
ENSXCOG00000020061atxn1a10073.203ENSSDUG00000011376atxn1a10072.594Seriola_dumerili
ENSXCOG00000020061atxn1a9371.111ENSSDUG00000006990atxn1b8571.111Seriola_dumerili
ENSXCOG00000020061atxn1a10073.082ENSSLDG00000013505atxn1a10072.473Seriola_lalandi_dorsalis
ENSXCOG00000020061atxn1a9371.111ENSSLDG00000016306atxn1b8571.111Seriola_lalandi_dorsalis
ENSXCOG00000020061atxn1a10041.056ENSSPUG00000016650ATXN110040.336Sphenodon_punctatus
ENSXCOG00000020061atxn1a9939.352ENSSPAG00000003388atxn1b9940.988Stegastes_partitus
ENSXCOG00000020061atxn1a10074.419ENSSPAG00000019849atxn1a10074.051Stegastes_partitus
ENSXCOG00000020061atxn1a10041.444ENSSSCG00000001065ATXN110041.676Sus_scrofa
ENSXCOG00000020061atxn1a10041.044ENSTGUG00000005986ATXN110040.688Taeniopygia_guttata
ENSXCOG00000020061atxn1a10062.222ENSTRUG00000014645atxn1a10061.975Takifugu_rubripes
ENSXCOG00000020061atxn1a9938.605ENSTRUG00000024789atxn1b9938.208Takifugu_rubripes
ENSXCOG00000020061atxn1a10061.538ENSTNIG00000005089atxn1a10061.538Tetraodon_nigroviridis
ENSXCOG00000020061atxn1a10040.541ENSTNIG00000018398atxn1b10040.173Tetraodon_nigroviridis
ENSXCOG00000020061atxn1a10041.795ENSTTRG00000014678ATXN19641.379Tursiops_truncatus
ENSXCOG00000020061atxn1a10040.888ENSUAMG00000004064ATXN110040.521Ursus_americanus
ENSXCOG00000020061atxn1a6148.414ENSUMAG00000017635-9248.414Ursus_maritimus
ENSXCOG00000020061atxn1a10042.840ENSVVUG00000003386ATXN110042.112Vulpes_vulpes
ENSXCOG00000020061atxn1a10041.341ENSXETG00000014184atxn16548.609Xenopus_tropicalis
ENSXCOG00000020061atxn1a9938.426ENSXMAG00000014270atxn1b9938.603Xiphophorus_maculatus
ENSXCOG00000020061atxn1a10092.500ENSXMAG00000003615atxn1a10092.500Xiphophorus_maculatus

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