EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000020143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6078 bases
Position: chrKQ557205.1:14652416-14658493
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026968	R3H	PF01424.22	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027300	-	1269	-	ENSXCOP00000026968	422 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020143	-	50	55.046	ENSG00000179912	R3HDM2	63	46.948	Homo_sapiens
ENSXCOG00000020143	-	95	53.033	ENSAPOG00000021873	-	77	49.301	Acanthochromis_polyacanthus
ENSXCOG00000020143	-	95	54.012	ENSAPEG00000014325	-	77	53.846	Amphiprion_percula
ENSXCOG00000020143	-	89	62.838	ENSCVAG00000007202	-	79	60.079	Cyprinodon_variegatus
ENSXCOG00000020143	-	92	37.526	ENSDARG00000102610	r3hdm2	50	38.445	Danio_rerio
ENSXCOG00000020143	-	97	41.221	ENSELUG00000002532	-	85	46.437	Esox_lucius
ENSXCOG00000020143	-	95	61.895	ENSFHEG00000007936	-	78	61.630	Fundulus_heteroclitus
ENSXCOG00000020143	-	73	54.348	ENSGMOG00000010391	-	62	57.609	Gadus_morhua
ENSXCOG00000020143	-	95	69.857	ENSGAFG00000015558	-	78	69.138	Gambusia_affinis
ENSXCOG00000020143	-	79	55.970	ENSGACG00000005581	-	79	55.944	Gasterosteus_aculeatus
ENSXCOG00000020143	-	96	52.849	ENSHBUG00000018525	-	76	53.242	Haplochromis_burtoni
ENSXCOG00000020143	-	96	51.896	ENSKMAG00000004052	-	65	60.993	Kryptolebias_marmoratus
ENSXCOG00000020143	-	97	53.711	ENSLBEG00000002779	-	85	54.352	Labrus_bergylta
ENSXCOG00000020143	-	96	54.653	ENSMAMG00000011755	-	77	54.510	Mastacembelus_armatus
ENSXCOG00000020143	-	50	52.609	ENSMGAG00000007123	-	64	52.609	Meleagris_gallopavo
ENSXCOG00000020143	-	50	52.402	ENSMODG00000019019	-	67	52.632	Monodelphis_domestica
ENSXCOG00000020143	-	96	53.267	ENSONIG00000002315	-	76	53.529	Oreochromis_niloticus
ENSXCOG00000020143	-	96	51.308	ENSORLG00000011606	-	78	51.600	Oryzias_latipes
ENSXCOG00000020143	-	96	51.911	ENSORLG00020019613	-	70	52.000	Oryzias_latipes_hni
ENSXCOG00000020143	-	84	55.641	ENSORLG00015011568	-	77	54.676	Oryzias_latipes_hsok
ENSXCOG00000020143	-	94	51.329	ENSOMEG00000009631	-	77	50.693	Oryzias_melastigma
ENSXCOG00000020143	-	94	51.329	ENSOMEG00000016256	-	77	50.693	Oryzias_melastigma
ENSXCOG00000020143	-	90	50.457	ENSPMGG00000001982	-	96	50.339	Periophthalmus_magnuspinnatus
ENSXCOG00000020143	-	96	68.421	ENSPFOG00000008096	-	78	69.000	Poecilia_formosa
ENSXCOG00000020143	-	96	68.219	ENSPLAG00000006973	-	78	68.800	Poecilia_latipinna
ENSXCOG00000020143	-	96	68.219	ENSPMEG00000014457	-	78	68.600	Poecilia_mexicana
ENSXCOG00000020143	-	95	53.346	ENSSMAG00000010735	-	81	54.706	Scophthalmus_maximus
ENSXCOG00000020143	-	96	54.420	ENSSDUG00000009188	-	77	54.864	Seriola_dumerili
ENSXCOG00000020143	-	93	53.863	ENSSLDG00000010034	-	98	55.508	Seriola_lalandi_dorsalis
ENSXCOG00000020143	-	88	39.286	ENSTGUG00000015881	R3HDM2	62	38.655	Taeniopygia_guttata
ENSXCOG00000020143	-	82	53.425	ENSTRUG00000013414	-	87	53.034	Takifugu_rubripes
ENSXCOG00000020143	-	64	62.996	ENSTNIG00000016976	-	60	63.755	Tetraodon_nigroviridis
ENSXCOG00000020143	-	96	69.309	ENSXMAG00000002994	-	78	68.600	Xiphophorus_maculatus