EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000020147 (Gene tree)
Gene ID: -
Gene Symbol: zcchc17
Alias: ps1d|zgc:85656
Full Name: zinc finger%2C CCHC domain containing 17
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7062 bases
Position: chrKQ557205.1:14707376-14714437
Accession: ZDB-GENE-040325-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000026972	S1	PF00575.23	7.7e-14	1	1
ENSXCOP00000026973	S1	PF00575.23	1.8e-13	1	1
ENSXCOP00000026974	S1	PF00575.23	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027305	-	717	-	ENSXCOP00000026972	238 (aa)	-	-
ENSXCOT00000027306	-	717	-	ENSXCOP00000026973	238 (aa)	-	-
ENSXCOT00000027307	-	729	-	ENSXCOP00000026974	242 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020147's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020147	zcchc17	65	58.710	ENSG00000121766	ZCCHC17	96	57.857	Homo_sapiens
ENSXCOG00000020147	zcchc17	94	80.258	ENSAPOG00000021724	zcchc17	94	81.974	Acanthochromis_polyacanthus
ENSXCOG00000020147	zcchc17	65	58.710	ENSAMEG00000017710	-	71	54.971	Ailuropoda_melanoleuca
ENSXCOG00000020147	zcchc17	90	82.791	ENSACIG00000020915	zcchc17	92	92.701	Amphilophus_citrinellus
ENSXCOG00000020147	zcchc17	94	81.818	ENSAOCG00000003880	zcchc17	94	82.251	Amphiprion_ocellaris
ENSXCOG00000020147	zcchc17	94	85.903	ENSAPEG00000014460	zcchc17	94	86.784	Amphiprion_percula
ENSXCOG00000020147	zcchc17	67	91.975	ENSATEG00000015942	zcchc17	96	80.851	Anabas_testudineus
ENSXCOG00000020147	zcchc17	60	62.238	ENSACAG00000000389	ZCCHC17	65	60.645	Anolis_carolinensis
ENSXCOG00000020147	zcchc17	65	58.710	ENSANAG00000024208	ZCCHC17	96	57.857	Aotus_nancymaae
ENSXCOG00000020147	zcchc17	74	90.286	ENSACLG00000019174	zcchc17	93	81.034	Astatotilapia_calliptera
ENSXCOG00000020147	zcchc17	70	75.301	ENSAMXG00000020595	zcchc17	73	75.595	Astyanax_mexicanus
ENSXCOG00000020147	zcchc17	65	56.129	ENSBTAG00000001432	-	72	52.632	Bos_taurus
ENSXCOG00000020147	zcchc17	65	58.710	ENSBTAG00000016818	ZCCHC17	71	54.971	Bos_taurus
ENSXCOG00000020147	zcchc17	65	57.419	ENSCJAG00000045207	-	71	53.801	Callithrix_jacchus
ENSXCOG00000020147	zcchc17	65	58.065	ENSCJAG00000006259	ZCCHC17	96	57.143	Callithrix_jacchus
ENSXCOG00000020147	zcchc17	65	57.419	ENSCAFG00000001857	-	72	53.801	Canis_familiaris
ENSXCOG00000020147	zcchc17	65	58.710	ENSCAFG00000011131	-	71	54.971	Canis_familiaris
ENSXCOG00000020147	zcchc17	55	57.692	ENSCAFG00020024828	ZCCHC17	86	59.259	Canis_lupus_dingo
ENSXCOG00000020147	zcchc17	61	54.167	ENSCAFG00020016032	-	90	54.167	Canis_lupus_dingo
ENSXCOG00000020147	zcchc17	65	58.710	ENSCHIG00000015629	-	71	54.971	Capra_hircus
ENSXCOG00000020147	zcchc17	79	50.785	ENSTSYG00000000490	-	96	57.857	Carlito_syrichta
ENSXCOG00000020147	zcchc17	81	51.813	ENSCAPG00000006774	ZCCHC17	82	53.073	Cavia_aperea
ENSXCOG00000020147	zcchc17	65	58.065	ENSCPOG00000022394	-	83	54.386	Cavia_porcellus
ENSXCOG00000020147	zcchc17	65	58.710	ENSCPOG00000000106	ZCCHC17	71	54.971	Cavia_porcellus
ENSXCOG00000020147	zcchc17	65	58.710	ENSCCAG00000033666	ZCCHC17	96	57.857	Cebus_capucinus
ENSXCOG00000020147	zcchc17	65	58.710	ENSCATG00000044586	ZCCHC17	96	57.857	Cercocebus_atys
ENSXCOG00000020147	zcchc17	64	59.091	ENSCLAG00000008794	ZCCHC17	71	55.556	Chinchilla_lanigera
ENSXCOG00000020147	zcchc17	65	58.710	ENSCSAG00000001032	ZCCHC17	71	54.971	Chlorocebus_sabaeus
ENSXCOG00000020147	zcchc17	65	46.452	ENSCHOG00000001581	ZCCHC17	71	43.860	Choloepus_hoffmanni
ENSXCOG00000020147	zcchc17	65	58.710	ENSCANG00000038509	ZCCHC17	96	57.857	Colobus_angolensis_palliatus
ENSXCOG00000020147	zcchc17	64	59.091	ENSCGRG00001014387	Zcchc17	68	58.282	Cricetulus_griseus_chok1gshd
ENSXCOG00000020147	zcchc17	64	59.091	ENSCGRG00000013323	Zcchc17	68	58.282	Cricetulus_griseus_crigri
ENSXCOG00000020147	zcchc17	92	73.874	ENSCSEG00000016039	zcchc17	91	85.000	Cynoglossus_semilaevis
ENSXCOG00000020147	zcchc17	94	83.691	ENSCVAG00000007112	zcchc17	94	84.120	Cyprinodon_variegatus
ENSXCOG00000020147	zcchc17	66	76.923	ENSDARG00000018936	zcchc17	75	72.727	Danio_rerio
ENSXCOG00000020147	zcchc17	71	54.971	ENSDNOG00000000509	-	71	54.971	Dasypus_novemcinctus
ENSXCOG00000020147	zcchc17	57	59.259	ENSDORG00000004128	Zcchc17	89	59.259	Dipodomys_ordii
ENSXCOG00000020147	zcchc17	64	58.824	ENSETEG00000007421	ZCCHC17	74	55.114	Echinops_telfairi
ENSXCOG00000020147	zcchc17	65	58.710	ENSEASG00005010819	ZCCHC17	71	54.971	Equus_asinus_asinus
ENSXCOG00000020147	zcchc17	67	58.025	ENSECAG00000025040	ZCCHC17	64	54.494	Equus_caballus
ENSXCOG00000020147	zcchc17	65	56.774	ENSEEUG00000014855	ZCCHC17	71	53.216	Erinaceus_europaeus
ENSXCOG00000020147	zcchc17	89	65.022	ENSELUG00000002450	zcchc17	92	64.253	Esox_lucius
ENSXCOG00000020147	zcchc17	79	52.356	ENSFCAG00000004196	ZCCHC17	95	57.857	Felis_catus
ENSXCOG00000020147	zcchc17	92	47.619	ENSFALG00000001165	ZCCHC17	94	50.000	Ficedula_albicollis
ENSXCOG00000020147	zcchc17	65	58.710	ENSFDAG00000016520	ZCCHC17	71	54.971	Fukomys_damarensis
ENSXCOG00000020147	zcchc17	94	90.393	ENSFHEG00000007848	zcchc17	94	87.336	Fundulus_heteroclitus
ENSXCOG00000020147	zcchc17	68	82.927	ENSGMOG00000010452	zcchc17	68	81.287	Gadus_morhua
ENSXCOG00000020147	zcchc17	63	59.603	ENSGALG00000000618	ZCCHC17	66	59.873	Gallus_gallus
ENSXCOG00000020147	zcchc17	100	96.311	ENSGAFG00000015591	zcchc17	100	96.311	Gambusia_affinis
ENSXCOG00000020147	zcchc17	70	87.574	ENSGACG00000005616	zcchc17	72	83.152	Gasterosteus_aculeatus
ENSXCOG00000020147	zcchc17	66	59.494	ENSGAGG00000019515	ZCCHC17	64	59.494	Gopherus_agassizii
ENSXCOG00000020147	zcchc17	65	58.710	ENSGGOG00000009126	ZCCHC17	96	57.857	Gorilla_gorilla
ENSXCOG00000020147	zcchc17	74	90.286	ENSHBUG00000018638	zcchc17	93	81.034	Haplochromis_burtoni
ENSXCOG00000020147	zcchc17	94	40.889	ENSHGLG00000014866	-	73	48.193	Heterocephalus_glaber_female
ENSXCOG00000020147	zcchc17	92	43.750	ENSHGLG00000005931	-	96	46.977	Heterocephalus_glaber_female
ENSXCOG00000020147	zcchc17	65	58.710	ENSHGLG00000019323	ZCCHC17	71	54.971	Heterocephalus_glaber_female
ENSXCOG00000020147	zcchc17	94	40.889	ENSHGLG00100000976	-	73	48.193	Heterocephalus_glaber_male
ENSXCOG00000020147	zcchc17	65	54.194	ENSHGLG00100009772	-	77	50.292	Heterocephalus_glaber_male
ENSXCOG00000020147	zcchc17	55	57.692	ENSHGLG00100014521	ZCCHC17	88	59.259	Heterocephalus_glaber_male
ENSXCOG00000020147	zcchc17	63	54.967	ENSHGLG00100019907	-	70	51.190	Heterocephalus_glaber_male
ENSXCOG00000020147	zcchc17	88	76.037	ENSHCOG00000005075	zcchc17	67	87.805	Hippocampus_comes
ENSXCOG00000020147	zcchc17	89	64.789	ENSIPUG00000020511	zcchc17	73	71.006	Ictalurus_punctatus
ENSXCOG00000020147	zcchc17	65	58.710	ENSSTOG00000003825	ZCCHC17	71	54.971	Ictidomys_tridecemlineatus
ENSXCOG00000020147	zcchc17	94	78.541	ENSKMAG00000003662	zcchc17	95	79.828	Kryptolebias_marmoratus
ENSXCOG00000020147	zcchc17	76	85.027	ENSLBEG00000002644	zcchc17	91	81.416	Labrus_bergylta
ENSXCOG00000020147	zcchc17	71	54.167	ENSLACG00000016945	ZCCHC17	56	64.394	Latimeria_chalumnae
ENSXCOG00000020147	zcchc17	71	64.162	ENSLOCG00000005280	zcchc17	67	64.740	Lepisosteus_oculatus
ENSXCOG00000020147	zcchc17	65	58.710	ENSLAFG00000015364	ZCCHC17	68	56.287	Loxodonta_africana
ENSXCOG00000020147	zcchc17	65	58.710	ENSMFAG00000039045	ZCCHC17	96	57.857	Macaca_fascicularis
ENSXCOG00000020147	zcchc17	65	58.710	ENSMMUG00000012156	ZCCHC17	96	57.857	Macaca_mulatta
ENSXCOG00000020147	zcchc17	65	58.710	ENSMNEG00000032021	ZCCHC17	96	57.857	Macaca_nemestrina
ENSXCOG00000020147	zcchc17	65	58.710	ENSMLEG00000040817	ZCCHC17	96	57.857	Mandrillus_leucophaeus
ENSXCOG00000020147	zcchc17	67	88.679	ENSMAMG00000011701	zcchc17	92	77.729	Mastacembelus_armatus
ENSXCOG00000020147	zcchc17	74	90.286	ENSMZEG00005005784	zcchc17	93	81.034	Maylandia_zebra
ENSXCOG00000020147	zcchc17	65	59.119	ENSMGAG00000000777	ZCCHC17	76	55.615	Meleagris_gallopavo
ENSXCOG00000020147	zcchc17	71	54.971	ENSMAUG00000005269	Zcchc17	69	57.143	Mesocricetus_auratus
ENSXCOG00000020147	zcchc17	63	48.322	ENSMICG00000027526	-	67	48.667	Microcebus_murinus
ENSXCOG00000020147	zcchc17	65	52.903	ENSMICG00000028289	-	73	50.847	Microcebus_murinus
ENSXCOG00000020147	zcchc17	71	54.971	ENSMICG00000009354	-	96	57.857	Microcebus_murinus
ENSXCOG00000020147	zcchc17	64	59.091	ENSMOCG00000014937	Zcchc17	71	55.556	Microtus_ochrogaster
ENSXCOG00000020147	zcchc17	65	81.818	ENSMMOG00000019813	zcchc17	68	81.818	Mola_mola
ENSXCOG00000020147	zcchc17	63	56.954	ENSMODG00000020372	-	84	56.688	Monodelphis_domestica
ENSXCOG00000020147	zcchc17	63	62.252	ENSMODG00000017082	-	65	61.250	Monodelphis_domestica
ENSXCOG00000020147	zcchc17	74	48.913	ENSMODG00000025345	-	88	48.925	Monodelphis_domestica
ENSXCOG00000020147	zcchc17	88	80.374	ENSMALG00000016295	zcchc17	95	75.676	Monopterus_albus
ENSXCOG00000020147	zcchc17	70	55.556	MGP_CAROLIEiJ_G0026546	Zcchc17	71	55.556	Mus_caroli
ENSXCOG00000020147	zcchc17	70	55.556	ENSMUSG00000028772	Zcchc17	71	55.556	Mus_musculus
ENSXCOG00000020147	zcchc17	70	55.556	MGP_PahariEiJ_G0028878	Zcchc17	71	55.556	Mus_pahari
ENSXCOG00000020147	zcchc17	64	59.091	MGP_SPRETEiJ_G0027526	Zcchc17	71	55.556	Mus_spretus
ENSXCOG00000020147	zcchc17	65	53.548	ENSMPUG00000015442	ZCCHC17	71	50.292	Mustela_putorius_furo
ENSXCOG00000020147	zcchc17	71	55.556	ENSMLUG00000000594	ZCCHC17	71	55.556	Myotis_lucifugus
ENSXCOG00000020147	zcchc17	65	58.065	ENSNGAG00000022689	Zcchc17	67	56.790	Nannospalax_galili
ENSXCOG00000020147	zcchc17	65	58.710	ENSNLEG00000001493	ZCCHC17	96	57.857	Nomascus_leucogenys
ENSXCOG00000020147	zcchc17	58	62.319	ENSOPRG00000014449	ZCCHC17	78	57.792	Ochotona_princeps
ENSXCOG00000020147	zcchc17	71	56.140	ENSODEG00000003683	ZCCHC17	71	56.140	Octodon_degus
ENSXCOG00000020147	zcchc17	75	87.640	ENSONIG00000002308	zcchc17	93	80.000	Oreochromis_niloticus
ENSXCOG00000020147	zcchc17	65	58.710	ENSOCUG00000014599	-	51	55.367	Oryctolagus_cuniculus
ENSXCOG00000020147	zcchc17	65	56.129	ENSOCUG00000027238	-	95	46.491	Oryctolagus_cuniculus
ENSXCOG00000020147	zcchc17	77	83.871	ENSORLG00000011563	zcchc17	93	78.222	Oryzias_latipes
ENSXCOG00000020147	zcchc17	77	83.871	ENSORLG00020019636	zcchc17	88	84.324	Oryzias_latipes_hni
ENSXCOG00000020147	zcchc17	74	86.857	ENSORLG00015011437	zcchc17	93	78.761	Oryzias_latipes_hsok
ENSXCOG00000020147	zcchc17	76	84.324	ENSOMEG00000009464	zcchc17	92	79.204	Oryzias_melastigma
ENSXCOG00000020147	zcchc17	65	59.355	ENSOGAG00000013749	ZCCHC17	71	56.140	Otolemur_garnettii
ENSXCOG00000020147	zcchc17	65	58.333	ENSOARG00000001618	-	71	54.651	Ovis_aries
ENSXCOG00000020147	zcchc17	65	58.710	ENSPPAG00000030937	ZCCHC17	96	57.857	Pan_paniscus
ENSXCOG00000020147	zcchc17	65	58.710	ENSPPRG00000003044	ZCCHC17	95	57.857	Panthera_pardus
ENSXCOG00000020147	zcchc17	65	58.710	ENSPTIG00000010650	ZCCHC17	95	57.857	Panthera_tigris_altaica
ENSXCOG00000020147	zcchc17	65	58.710	ENSPTRG00000000456	ZCCHC17	96	57.857	Pan_troglodytes
ENSXCOG00000020147	zcchc17	65	58.710	ENSPANG00000016167	ZCCHC17	96	57.857	Papio_anubis
ENSXCOG00000020147	zcchc17	84	65.672	ENSPKIG00000010742	zcchc17	69	72.515	Paramormyrops_kingsleyae
ENSXCOG00000020147	zcchc17	64	60.390	ENSPSIG00000007187	ZCCHC17	65	60.625	Pelodiscus_sinensis
ENSXCOG00000020147	zcchc17	90	77.093	ENSPMGG00000005830	zcchc17	92	76.000	Periophthalmus_magnuspinnatus
ENSXCOG00000020147	zcchc17	64	58.442	ENSPEMG00000015853	-	71	54.971	Peromyscus_maniculatus_bairdii
ENSXCOG00000020147	zcchc17	63	64.901	ENSPCIG00000014143	-	69	62.048	Phascolarctos_cinereus
ENSXCOG00000020147	zcchc17	100	95.565	ENSPFOG00000007896	zcchc17	100	95.565	Poecilia_formosa
ENSXCOG00000020147	zcchc17	100	95.161	ENSPLAG00000007114	zcchc17	100	95.161	Poecilia_latipinna
ENSXCOG00000020147	zcchc17	100	95.565	ENSPMEG00000014567	zcchc17	100	95.565	Poecilia_mexicana
ENSXCOG00000020147	zcchc17	100	95.918	ENSPREG00000005325	zcchc17	81	95.918	Poecilia_reticulata
ENSXCOG00000020147	zcchc17	67	56.173	ENSPPYG00000001617	-	62	52.809	Pongo_abelii
ENSXCOG00000020147	zcchc17	65	56.129	ENSPCAG00000011665	ZCCHC17	71	52.632	Procavia_capensis
ENSXCOG00000020147	zcchc17	65	58.710	ENSPCOG00000024007	ZCCHC17	96	57.857	Propithecus_coquereli
ENSXCOG00000020147	zcchc17	65	58.710	ENSPVAG00000014747	ZCCHC17	71	54.971	Pteropus_vampyrus
ENSXCOG00000020147	zcchc17	74	90.286	ENSPNYG00000009648	zcchc17	97	92.806	Pundamilia_nyererei
ENSXCOG00000020147	zcchc17	89	70.283	ENSPNAG00000026780	zcchc17	74	74.419	Pygocentrus_nattereri
ENSXCOG00000020147	zcchc17	88	54.673	ENSRNOG00000012266	Zcchc17	71	56.140	Rattus_norvegicus
ENSXCOG00000020147	zcchc17	65	58.710	ENSRBIG00000033939	ZCCHC17	96	57.857	Rhinopithecus_bieti
ENSXCOG00000020147	zcchc17	65	58.710	ENSRROG00000028866	ZCCHC17	96	57.857	Rhinopithecus_roxellana
ENSXCOG00000020147	zcchc17	65	58.710	ENSSBOG00000029249	ZCCHC17	96	57.857	Saimiri_boliviensis_boliviensis
ENSXCOG00000020147	zcchc17	90	49.554	ENSSHAG00000008748	ZCCHC17	93	52.232	Sarcophilus_harrisii
ENSXCOG00000020147	zcchc17	71	67.429	ENSSFOG00015021334	zcchc17	66	69.643	Scleropages_formosus
ENSXCOG00000020147	zcchc17	91	75.527	ENSSMAG00000010817	zcchc17	94	76.230	Scophthalmus_maximus
ENSXCOG00000020147	zcchc17	74	88.701	ENSSDUG00000009095	zcchc17	94	79.661	Seriola_dumerili
ENSXCOG00000020147	zcchc17	74	88.136	ENSSLDG00000009837	zcchc17	94	81.333	Seriola_lalandi_dorsalis
ENSXCOG00000020147	zcchc17	71	57.396	ENSSPUG00000006912	ZCCHC17	61	60.510	Sphenodon_punctatus
ENSXCOG00000020147	zcchc17	94	76.695	ENSSPAG00000016785	zcchc17	94	81.356	Stegastes_partitus
ENSXCOG00000020147	zcchc17	65	58.710	ENSSSCG00000031639	ZCCHC17	71	54.971	Sus_scrofa
ENSXCOG00000020147	zcchc17	87	44.700	ENSTGUG00000000817	ZCCHC17	98	45.205	Taeniopygia_guttata
ENSXCOG00000020147	zcchc17	94	77.729	ENSTRUG00000013252	zcchc17	94	78.603	Takifugu_rubripes
ENSXCOG00000020147	zcchc17	91	76.606	ENSTNIG00000016980	zcchc17	91	76.712	Tetraodon_nigroviridis
ENSXCOG00000020147	zcchc17	65	58.710	ENSTTRG00000014870	ZCCHC17	71	54.971	Tursiops_truncatus
ENSXCOG00000020147	zcchc17	77	52.717	ENSUAMG00000018258	ZCCHC17	87	54.971	Ursus_americanus
ENSXCOG00000020147	zcchc17	65	58.710	ENSUMAG00000009188	-	71	54.971	Ursus_maritimus
ENSXCOG00000020147	zcchc17	64	58.442	ENSVPAG00000003834	ZCCHC17	72	54.335	Vicugna_pacos
ENSXCOG00000020147	zcchc17	67	58.750	ENSXETG00000012917	zcchc17	86	59.868	Xenopus_tropicalis
ENSXCOG00000020147	zcchc17	100	98.361	ENSXMAG00000002980	zcchc17	100	98.361	Xiphophorus_maculatus