EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000020178 (Gene tree)
Gene ID: -
Gene Symbol: mrpl3
Alias: fj61d01|wu:fj61d01|zgc:66423
Full Name: mitochondrial ribosomal protein L3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 12176 bases
Position: chrKQ557205.1:15608866-15621041
Accession: ZDB-GENE-030131-8227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027012	Ribosomal_L3	PF00297.22	3.9e-45	1	1
ENSXCOP00000027010	Ribosomal_L3	PF00297.22	2.8e-44	1	1
ENSXCOP00000027011	Ribosomal_L3	PF00297.22	2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027343	-	981	-	ENSXCOP00000027010	326 (aa)	-	-
ENSXCOT00000027344	-	918	-	ENSXCOP00000027011	305 (aa)	-	-
ENSXCOT00000027345	-	1044	-	ENSXCOP00000027012	347 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020178	mrpl3	85	57.426	ENSG00000114686	MRPL3	100	67.308	Homo_sapiens
ENSXCOG00000020178	mrpl3	91	82.770	ENSAPOG00000006179	mrpl3	98	77.679	Acanthochromis_polyacanthus
ENSXCOG00000020178	mrpl3	79	63.320	ENSAMEG00000014272	MRPL3	69	63.320	Ailuropoda_melanoleuca
ENSXCOG00000020178	mrpl3	74	35.931	ENSACIG00000009210	-	70	34.387	Amphilophus_citrinellus
ENSXCOG00000020178	mrpl3	90	80.339	ENSACIG00000015992	mrpl3	98	74.405	Amphilophus_citrinellus
ENSXCOG00000020178	mrpl3	91	83.784	ENSAOCG00000024456	mrpl3	98	78.571	Amphiprion_ocellaris
ENSXCOG00000020178	mrpl3	91	83.784	ENSAPEG00000015997	mrpl3	98	78.571	Amphiprion_percula
ENSXCOG00000020178	mrpl3	90	78.644	ENSATEG00000017145	mrpl3	98	74.328	Anabas_testudineus
ENSXCOG00000020178	mrpl3	80	68.077	ENSAPLG00000011128	MRPL3	82	68.077	Anas_platyrhynchos
ENSXCOG00000020178	mrpl3	87	64.561	ENSACAG00000001596	MRPL3	92	58.788	Anolis_carolinensis
ENSXCOG00000020178	mrpl3	80	59.615	ENSANAG00000023191	-	87	54.605	Aotus_nancymaae
ENSXCOG00000020178	mrpl3	85	59.406	ENSANAG00000021528	-	87	59.406	Aotus_nancymaae
ENSXCOG00000020178	mrpl3	91	78.788	ENSACLG00000020843	mrpl3	98	73.214	Astatotilapia_calliptera
ENSXCOG00000020178	mrpl3	87	70.213	ENSAMXG00000043612	mrpl3	79	72.263	Astyanax_mexicanus
ENSXCOG00000020178	mrpl3	79	64.591	ENSBTAG00000030942	MRPL3	74	64.591	Bos_taurus
ENSXCOG00000020178	mrpl3	76	37.302	WBGene00016142	mrps-18C	60	37.302	Caenorhabditis_elegans
ENSXCOG00000020178	mrpl3	85	59.736	ENSCJAG00000003143	MRPL3	87	59.736	Callithrix_jacchus
ENSXCOG00000020178	mrpl3	85	59.076	ENSCAFG00000006125	MRPL3	87	59.076	Canis_familiaris
ENSXCOG00000020178	mrpl3	85	59.076	ENSCAFG00020027448	MRPL3	87	59.076	Canis_lupus_dingo
ENSXCOG00000020178	mrpl3	79	64.981	ENSCHIG00000024783	MRPL3	74	64.981	Capra_hircus
ENSXCOG00000020178	mrpl3	79	62.934	ENSTSYG00000003691	MRPL3	74	62.934	Carlito_syrichta
ENSXCOG00000020178	mrpl3	91	50.714	ENSCAPG00000013574	MRPL3	87	50.714	Cavia_aperea
ENSXCOG00000020178	mrpl3	85	60.870	ENSCPOG00000021216	MRPL3	87	58.033	Cavia_porcellus
ENSXCOG00000020178	mrpl3	85	58.746	ENSCCAG00000030011	MRPL3	87	58.746	Cebus_capucinus
ENSXCOG00000020178	mrpl3	85	58.086	ENSCATG00000038023	MRPL3	87	58.086	Cercocebus_atys
ENSXCOG00000020178	mrpl3	85	60.870	ENSCLAG00000003513	MRPL3	87	58.033	Chinchilla_lanigera
ENSXCOG00000020178	mrpl3	85	58.086	ENSCSAG00000010510	MRPL3	87	58.086	Chlorocebus_sabaeus
ENSXCOG00000020178	mrpl3	85	35.644	ENSCHOG00000013862	MRPL3	87	35.644	Choloepus_hoffmanni
ENSXCOG00000020178	mrpl3	91	64.000	ENSCPBG00000022852	MRPL3	86	64.000	Chrysemys_picta_bellii
ENSXCOG00000020178	mrpl3	84	44.727	ENSCING00000008395	-	70	44.727	Ciona_intestinalis
ENSXCOG00000020178	mrpl3	75	47.826	ENSCSAVG00000006945	-	86	47.755	Ciona_savignyi
ENSXCOG00000020178	mrpl3	85	59.058	ENSCANG00000031568	MRPL3	87	57.096	Colobus_angolensis_palliatus
ENSXCOG00000020178	mrpl3	85	59.928	ENSCGRG00001016688	Mrpl3	86	57.143	Cricetulus_griseus_chok1gshd
ENSXCOG00000020178	mrpl3	93	53.681	ENSCGRG00000015457	Mrpl3	80	53.681	Cricetulus_griseus_crigri
ENSXCOG00000020178	mrpl3	96	75.080	ENSCSEG00000008636	mrpl3	98	72.619	Cynoglossus_semilaevis
ENSXCOG00000020178	mrpl3	91	85.811	ENSCVAG00000011820	mrpl3	97	80.240	Cyprinodon_variegatus
ENSXCOG00000020178	mrpl3	96	65.839	ENSDARG00000103318	mrpl3	93	65.839	Danio_rerio
ENSXCOG00000020178	mrpl3	87	60.563	ENSDNOG00000047253	MRPL3	79	60.563	Dasypus_novemcinctus
ENSXCOG00000020178	mrpl3	78	62.598	ENSDORG00000029436	Mrpl3	94	62.598	Dipodomys_ordii
ENSXCOG00000020178	mrpl3	75	41.379	FBgn0030686	mRpL3	71	41.379	Drosophila_melanogaster
ENSXCOG00000020178	mrpl3	80	56.923	ENSETEG00000010458	MRPL3	75	56.923	Echinops_telfairi
ENSXCOG00000020178	mrpl3	78	64.173	ENSEBUG00000009944	mrpl3	88	64.173	Eptatretus_burgeri
ENSXCOG00000020178	mrpl3	85	57.426	ENSEASG00005005550	MRPL3	78	57.426	Equus_asinus_asinus
ENSXCOG00000020178	mrpl3	85	59.928	ENSECAG00000016736	MRPL3	87	57.096	Equus_caballus
ENSXCOG00000020178	mrpl3	75	58.079	ENSEEUG00000015033	MRPL3	89	58.079	Erinaceus_europaeus
ENSXCOG00000020178	mrpl3	84	75.912	ENSELUG00000003470	mrpl3	95	73.064	Esox_lucius
ENSXCOG00000020178	mrpl3	86	58.804	ENSFCAG00000006335	MRPL3	86	58.804	Felis_catus
ENSXCOG00000020178	mrpl3	91	62.458	ENSFALG00000012506	MRPL3	86	62.791	Ficedula_albicollis
ENSXCOG00000020178	mrpl3	91	55.346	ENSFDAG00000017320	MRPL3	91	55.346	Fukomys_damarensis
ENSXCOG00000020178	mrpl3	91	83.893	ENSFHEG00000023451	mrpl3	98	79.104	Fundulus_heteroclitus
ENSXCOG00000020178	mrpl3	88	78.819	ENSGMOG00000017025	mrpl3	98	74.516	Gadus_morhua
ENSXCOG00000020178	mrpl3	83	66.790	ENSGALG00000040873	MRPL3	86	62.667	Gallus_gallus
ENSXCOG00000020178	mrpl3	95	90.064	ENSGAFG00000018445	mrpl3	98	93.038	Gambusia_affinis
ENSXCOG00000020178	mrpl3	96	72.843	ENSGACG00000006011	mrpl3	98	72.537	Gasterosteus_aculeatus
ENSXCOG00000020178	mrpl3	82	69.549	ENSGAGG00000019040	MRPL3	76	69.549	Gopherus_agassizii
ENSXCOG00000020178	mrpl3	85	57.426	ENSGGOG00000011128	MRPL3	87	57.426	Gorilla_gorilla
ENSXCOG00000020178	mrpl3	85	47.292	ENSGGOG00000025644	-	85	46.053	Gorilla_gorilla
ENSXCOG00000020178	mrpl3	91	78.788	ENSHBUG00000019966	mrpl3	98	73.214	Haplochromis_burtoni
ENSXCOG00000020178	mrpl3	91	56.604	ENSHGLG00000016782	MRPL3	91	56.604	Heterocephalus_glaber_female
ENSXCOG00000020178	mrpl3	91	56.604	ENSHGLG00100014743	MRPL3	91	56.604	Heterocephalus_glaber_male
ENSXCOG00000020178	mrpl3	91	75.839	ENSHCOG00000011011	mrpl3	98	71.642	Hippocampus_comes
ENSXCOG00000020178	mrpl3	87	71.228	ENSIPUG00000011902	mrpl3	88	69.508	Ictalurus_punctatus
ENSXCOG00000020178	mrpl3	85	59.206	ENSSTOG00000012804	MRPL3	87	57.237	Ictidomys_tridecemlineatus
ENSXCOG00000020178	mrpl3	82	62.454	ENSJJAG00000006706	Mrpl3	87	58.086	Jaculus_jaculus
ENSXCOG00000020178	mrpl3	96	75.719	ENSKMAG00000002193	mrpl3	98	74.925	Kryptolebias_marmoratus
ENSXCOG00000020178	mrpl3	90	79.054	ENSLBEG00000000445	mrpl3	97	73.731	Labrus_bergylta
ENSXCOG00000020178	mrpl3	97	68.750	ENSLOCG00000001514	mrpl3	93	67.081	Lepisosteus_oculatus
ENSXCOG00000020178	mrpl3	79	63.320	ENSLAFG00000012176	MRPL3	84	58.562	Loxodonta_africana
ENSXCOG00000020178	mrpl3	85	57.756	ENSMFAG00000003455	MRPL3	87	57.756	Macaca_fascicularis
ENSXCOG00000020178	mrpl3	85	57.756	ENSMMUG00000000220	MRPL3	87	57.756	Macaca_mulatta
ENSXCOG00000020178	mrpl3	85	57.426	ENSMNEG00000042711	MRPL3	87	57.426	Macaca_nemestrina
ENSXCOG00000020178	mrpl3	85	58.086	ENSMLEG00000029925	MRPL3	87	58.086	Mandrillus_leucophaeus
ENSXCOG00000020178	mrpl3	96	74.841	ENSMAMG00000010715	mrpl3	98	73.887	Mastacembelus_armatus
ENSXCOG00000020178	mrpl3	91	78.788	ENSMZEG00005006750	mrpl3	98	73.214	Maylandia_zebra
ENSXCOG00000020178	mrpl3	83	66.421	ENSMGAG00000011444	MRPL3	86	66.421	Meleagris_gallopavo
ENSXCOG00000020178	mrpl3	85	61.011	ENSMAUG00000006653	Mrpl3	86	59.136	Mesocricetus_auratus
ENSXCOG00000020178	mrpl3	85	60.145	ENSMICG00000049541	-	87	57.377	Microcebus_murinus
ENSXCOG00000020178	mrpl3	85	56.081	ENSMICG00000033138	-	86	56.081	Microcebus_murinus
ENSXCOG00000020178	mrpl3	87	60.490	ENSMOCG00000019372	Mrpl3	87	59.406	Microtus_ochrogaster
ENSXCOG00000020178	mrpl3	90	78.767	ENSMMOG00000019894	mrpl3	96	76.667	Mola_mola
ENSXCOG00000020178	mrpl3	79	68.605	ENSMODG00000011873	MRPL3	73	68.605	Monodelphis_domestica
ENSXCOG00000020178	mrpl3	87	79.298	ENSMALG00000017620	mrpl3	94	74.757	Monopterus_albus
ENSXCOG00000020178	mrpl3	85	60.289	MGP_CAROLIEiJ_G0032601	Mrpl3	98	58.054	Mus_caroli
ENSXCOG00000020178	mrpl3	85	60.289	ENSMUSG00000032563	Mrpl3	98	59.060	Mus_musculus
ENSXCOG00000020178	mrpl3	80	63.077	MGP_PahariEiJ_G0015469	Mrpl3	98	58.333	Mus_pahari
ENSXCOG00000020178	mrpl3	85	60.289	MGP_SPRETEiJ_G0033747	Mrpl3	98	59.060	Mus_spretus
ENSXCOG00000020178	mrpl3	85	57.756	ENSMPUG00000010052	MRPL3	87	57.756	Mustela_putorius_furo
ENSXCOG00000020178	mrpl3	79	63.218	ENSMLUG00000008515	MRPL3	83	58.703	Myotis_lucifugus
ENSXCOG00000020178	mrpl3	85	57.756	ENSNGAG00000010660	Mrpl3	87	57.756	Nannospalax_galili
ENSXCOG00000020178	mrpl3	96	75.719	ENSNBRG00000009401	mrpl3	98	73.433	Neolamprologus_brichardi
ENSXCOG00000020178	mrpl3	85	57.426	ENSNLEG00000002810	MRPL3	87	57.426	Nomascus_leucogenys
ENSXCOG00000020178	mrpl3	80	55.769	ENSMEUG00000016391	MRPL3	81	55.769	Notamacropus_eugenii
ENSXCOG00000020178	mrpl3	79	55.985	ENSOPRG00000000501	MRPL3	81	55.985	Ochotona_princeps
ENSXCOG00000020178	mrpl3	85	60.145	ENSODEG00000018670	-	87	57.807	Octodon_degus
ENSXCOG00000020178	mrpl3	78	64.567	ENSODEG00000018142	-	96	58.725	Octodon_degus
ENSXCOG00000020178	mrpl3	96	75.719	ENSONIG00000002051	mrpl3	76	81.695	Oreochromis_niloticus
ENSXCOG00000020178	mrpl3	71	64.977	ENSOANG00000006770	MRPL3	89	64.977	Ornithorhynchus_anatinus
ENSXCOG00000020178	mrpl3	86	58.472	ENSOCUG00000002951	MRPL3	86	58.472	Oryctolagus_cuniculus
ENSXCOG00000020178	mrpl3	95	77.994	ENSORLG00000003736	mrpl3	98	73.512	Oryzias_latipes
ENSXCOG00000020178	mrpl3	91	80.405	ENSORLG00020002193	mrpl3	98	74.107	Oryzias_latipes_hni
ENSXCOG00000020178	mrpl3	91	80.405	ENSORLG00015012654	mrpl3	98	73.810	Oryzias_latipes_hsok
ENSXCOG00000020178	mrpl3	91	78.667	ENSOMEG00000015235	mrpl3	98	73.433	Oryzias_melastigma
ENSXCOG00000020178	mrpl3	80	64.231	ENSOGAG00000016133	MRPL3	71	64.231	Otolemur_garnettii
ENSXCOG00000020178	mrpl3	79	64.591	ENSOARG00000009221	MRPL3	81	58.389	Ovis_aries
ENSXCOG00000020178	mrpl3	85	47.697	ENSPPAG00000034479	-	86	47.697	Pan_paniscus
ENSXCOG00000020178	mrpl3	79	61.390	ENSPPAG00000015358	MRPL3	74	61.390	Pan_paniscus
ENSXCOG00000020178	mrpl3	79	64.093	ENSPPRG00000015417	MRPL3	87	57.756	Panthera_pardus
ENSXCOG00000020178	mrpl3	79	64.093	ENSPTIG00000012251	MRPL3	68	64.093	Panthera_tigris_altaica
ENSXCOG00000020178	mrpl3	85	47.195	ENSPTRG00000045519	-	85	47.195	Pan_troglodytes
ENSXCOG00000020178	mrpl3	79	62.162	ENSPTRG00000015396	MRPL3	74	62.162	Pan_troglodytes
ENSXCOG00000020178	mrpl3	85	58.086	ENSPANG00000017085	MRPL3	87	58.086	Papio_anubis
ENSXCOG00000020178	mrpl3	96	64.151	ENSPKIG00000023678	mrpl3	98	61.471	Paramormyrops_kingsleyae
ENSXCOG00000020178	mrpl3	65	74.242	ENSPSIG00000002908	MRPL3	81	74.242	Pelodiscus_sinensis
ENSXCOG00000020178	mrpl3	96	72.698	ENSPMGG00000023558	mrpl3	98	70.149	Periophthalmus_magnuspinnatus
ENSXCOG00000020178	mrpl3	85	61.372	ENSPEMG00000012061	Mrpl3	87	58.224	Peromyscus_maniculatus_bairdii
ENSXCOG00000020178	mrpl3	81	67.803	ENSPMAG00000003407	mrpl3	82	67.803	Petromyzon_marinus
ENSXCOG00000020178	mrpl3	80	67.308	ENSPCIG00000023992	MRPL3	76	67.308	Phascolarctos_cinereus
ENSXCOG00000020178	mrpl3	99	80.952	ENSPFOG00000002850	mrpl3	98	84.524	Poecilia_formosa
ENSXCOG00000020178	mrpl3	99	80.896	ENSPLAG00000002981	mrpl3	97	84.478	Poecilia_latipinna
ENSXCOG00000020178	mrpl3	99	81.493	ENSPMEG00000002060	mrpl3	97	85.075	Poecilia_mexicana
ENSXCOG00000020178	mrpl3	99	81.791	ENSPREG00000003943	mrpl3	97	85.373	Poecilia_reticulata
ENSXCOG00000020178	mrpl3	85	56.106	ENSPPYG00000014102	MRPL3	87	56.106	Pongo_abelii
ENSXCOG00000020178	mrpl3	84	39.130	ENSPCAG00000008624	MRPL3	86	39.130	Procavia_capensis
ENSXCOG00000020178	mrpl3	79	62.934	ENSPCOG00000017228	MRPL3	84	57.679	Propithecus_coquereli
ENSXCOG00000020178	mrpl3	85	59.344	ENSPVAG00000012966	MRPL3	87	59.344	Pteropus_vampyrus
ENSXCOG00000020178	mrpl3	91	78.788	ENSPNYG00000008358	mrpl3	98	73.214	Pundamilia_nyererei
ENSXCOG00000020178	mrpl3	94	66.557	ENSPNAG00000000723	mrpl3	88	66.557	Pygocentrus_nattereri
ENSXCOG00000020178	mrpl3	83	60.806	ENSRNOG00000012650	Mrpl3	87	57.096	Rattus_norvegicus
ENSXCOG00000020178	mrpl3	85	56.766	ENSRBIG00000033474	MRPL3	87	56.766	Rhinopithecus_bieti
ENSXCOG00000020178	mrpl3	85	57.426	ENSRROG00000040393	MRPL3	87	57.426	Rhinopithecus_roxellana
ENSXCOG00000020178	mrpl3	70	42.396	YGR220C	MRPL9	79	42.396	Saccharomyces_cerevisiae
ENSXCOG00000020178	mrpl3	85	60.289	ENSSBOG00000021018	MRPL3	87	58.746	Saimiri_boliviensis_boliviensis
ENSXCOG00000020178	mrpl3	84	66.058	ENSSHAG00000000330	MRPL3	85	66.058	Sarcophilus_harrisii
ENSXCOG00000020178	mrpl3	89	69.072	ENSSFOG00015023683	mrpl3	88	69.444	Scleropages_formosus
ENSXCOG00000020178	mrpl3	99	72.360	ENSSMAG00000011689	mrpl3	98	72.917	Scophthalmus_maximus
ENSXCOG00000020178	mrpl3	96	76.752	ENSSDUG00000007598	mrpl3	98	75.668	Seriola_dumerili
ENSXCOG00000020178	mrpl3	96	76.752	ENSSLDG00000008264	mrpl3	98	75.668	Seriola_lalandi_dorsalis
ENSXCOG00000020178	mrpl3	90	52.381	ENSSARG00000003782	MRPL3	85	52.203	Sorex_araneus
ENSXCOG00000020178	mrpl3	89	65.862	ENSSPUG00000002872	MRPL3	86	64.238	Sphenodon_punctatus
ENSXCOG00000020178	mrpl3	91	78.378	ENSSPAG00000021726	mrpl3	98	73.810	Stegastes_partitus
ENSXCOG00000020178	mrpl3	80	63.077	ENSSSCG00000011179	MRPL3	65	63.077	Sus_scrofa
ENSXCOG00000020178	mrpl3	66	69.000	ENSTGUG00000004204	-	82	69.000	Taeniopygia_guttata
ENSXCOG00000020178	mrpl3	91	79.730	ENSTRUG00000009650	mrpl3	98	73.512	Takifugu_rubripes
ENSXCOG00000020178	mrpl3	96	76.038	ENSTNIG00000006434	mrpl3	98	72.836	Tetraodon_nigroviridis
ENSXCOG00000020178	mrpl3	51	56.410	ENSTBEG00000013767	-	62	56.410	Tupaia_belangeri
ENSXCOG00000020178	mrpl3	85	51.815	ENSTTRG00000010358	MRPL3	86	53.000	Tursiops_truncatus
ENSXCOG00000020178	mrpl3	79	64.093	ENSUAMG00000000526	MRPL3	86	58.361	Ursus_americanus
ENSXCOG00000020178	mrpl3	79	64.093	ENSUMAG00000017621	MRPL3	78	58.361	Ursus_maritimus
ENSXCOG00000020178	mrpl3	79	40.856	ENSVPAG00000012253	MRPL3	81	40.856	Vicugna_pacos
ENSXCOG00000020178	mrpl3	85	59.076	ENSVVUG00000002847	MRPL3	87	59.076	Vulpes_vulpes
ENSXCOG00000020178	mrpl3	83	62.500	ENSXETG00000001845	mrpl3	81	61.151	Xenopus_tropicalis
ENSXCOG00000020178	mrpl3	91	94.932	ENSXMAG00000002586	mrpl3	97	89.552	Xiphophorus_maculatus