EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000020255 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 18028 bases
Position: chrKQ557212.1:10454645-10472672
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027134	ResIII	PF04851.15	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027467	-	5100	-	ENSXCOP00000027134	1699 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000020255	chd2	91	55.641	ENSXCOG00000017184	chd1	77	65.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020255	chd2	99	69.520	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSXCOG00000020255	chd2	99	91.765	ENSAPOG00000008913	chd2	96	93.333	Acanthochromis_polyacanthus
ENSXCOG00000020255	chd2	63	74.357	ENSAMEG00000010805	-	94	73.869	Ailuropoda_melanoleuca
ENSXCOG00000020255	chd2	99	84.315	ENSAOCG00000016332	chd2	99	84.110	Amphiprion_ocellaris
ENSXCOG00000020255	chd2	99	91.765	ENSAPEG00000016676	chd2	99	88.984	Amphiprion_percula
ENSXCOG00000020255	chd2	99	94.118	ENSATEG00000005246	chd2	96	93.333	Anabas_testudineus
ENSXCOG00000020255	chd2	99	69.388	ENSANAG00000024017	-	96	69.605	Aotus_nancymaae
ENSXCOG00000020255	chd2	99	85.484	ENSACLG00000021370	chd2	99	85.665	Astatotilapia_calliptera
ENSXCOG00000020255	chd2	99	69.277	ENSCJAG00000020444	-	96	69.548	Callithrix_jacchus
ENSXCOG00000020255	chd2	100	69.572	ENSCAFG00000010998	CHD2	95	73.760	Canis_familiaris
ENSXCOG00000020255	chd2	99	68.386	ENSCHIG00000022261	-	96	68.341	Capra_hircus
ENSXCOG00000020255	chd2	100	69.265	ENSTSYG00000003272	-	95	71.221	Carlito_syrichta
ENSXCOG00000020255	chd2	92	73.480	ENSCPOG00000005800	-	96	74.846	Cavia_porcellus
ENSXCOG00000020255	chd2	99	69.443	ENSCCAG00000035304	-	96	69.661	Cebus_capucinus
ENSXCOG00000020255	chd2	99	69.350	ENSCATG00000031069	-	96	69.622	Cercocebus_atys
ENSXCOG00000020255	chd2	100	68.952	ENSCLAG00000016269	-	98	69.235	Chinchilla_lanigera
ENSXCOG00000020255	chd2	99	69.405	ENSCSAG00000017007	-	96	69.678	Chlorocebus_sabaeus
ENSXCOG00000020255	chd2	73	80.745	ENSCHOG00000000608	-	74	80.832	Choloepus_hoffmanni
ENSXCOG00000020255	chd2	83	76.471	ENSCPBG00000018049	-	95	81.818	Chrysemys_picta_bellii
ENSXCOG00000020255	chd2	77	52.345	ENSCSAVG00000007580	-	94	57.484	Ciona_savignyi
ENSXCOG00000020255	chd2	100	68.459	ENSCANG00000038126	-	96	69.622	Colobus_angolensis_palliatus
ENSXCOG00000020255	chd2	99	69.553	ENSCGRG00001006649	Chd2	96	69.322	Cricetulus_griseus_chok1gshd
ENSXCOG00000020255	chd2	99	69.553	ENSCGRG00000018154	Chd2	96	69.322	Cricetulus_griseus_crigri
ENSXCOG00000020255	chd2	99	90.722	ENSCSEG00000003646	chd2	95	90.476	Cynoglossus_semilaevis
ENSXCOG00000020255	chd2	100	94.286	ENSCVAG00000002427	chd2	96	94.340	Cyprinodon_variegatus
ENSXCOG00000020255	chd2	98	79.296	ENSDARG00000060687	chd2	96	81.014	Danio_rerio
ENSXCOG00000020255	chd2	99	69.565	ENSDNOG00000009796	-	96	69.617	Dasypus_novemcinctus
ENSXCOG00000020255	chd2	52	70.528	ENSEBUG00000014994	chd2	82	66.667	Eptatretus_burgeri
ENSXCOG00000020255	chd2	100	69.753	ENSEASG00005015526	-	97	78.526	Equus_asinus_asinus
ENSXCOG00000020255	chd2	96	100.000	ENSELUG00000017981	chd2	98	79.668	Esox_lucius
ENSXCOG00000020255	chd2	97	69.326	ENSFALG00000010369	-	97	69.404	Ficedula_albicollis
ENSXCOG00000020255	chd2	100	69.227	ENSFDAG00000020651	-	96	69.509	Fukomys_damarensis
ENSXCOG00000020255	chd2	99	87.806	ENSFHEG00000002119	chd2	99	88.310	Fundulus_heteroclitus
ENSXCOG00000020255	chd2	94	79.372	ENSGMOG00000002890	chd2	98	78.831	Gadus_morhua
ENSXCOG00000020255	chd2	100	93.279	ENSGAFG00000001905	chd2	98	93.337	Gambusia_affinis
ENSXCOG00000020255	chd2	93	84.690	ENSGACG00000013246	chd2	94	85.019	Gasterosteus_aculeatus
ENSXCOG00000020255	chd2	83	78.657	ENSGAGG00000013176	-	98	82.241	Gopherus_agassizii
ENSXCOG00000020255	chd2	100	67.896	ENSGGOG00000015677	CHD2	96	68.644	Gorilla_gorilla
ENSXCOG00000020255	chd2	99	91.919	ENSHBUG00000017947	chd2	96	92.381	Haplochromis_burtoni
ENSXCOG00000020255	chd2	100	69.066	ENSHGLG00000004435	CHD2	96	69.344	Heterocephalus_glaber_female
ENSXCOG00000020255	chd2	100	68.626	ENSHGLG00100016376	-	96	68.891	Heterocephalus_glaber_male
ENSXCOG00000020255	chd2	100	78.914	ENSHCOG00000008855	chd2	95	79.137	Hippocampus_comes
ENSXCOG00000020255	chd2	99	73.209	ENSIPUG00000000488	chd2	98	72.842	Ictalurus_punctatus
ENSXCOG00000020255	chd2	99	69.791	ENSSTOG00000001270	-	96	69.622	Ictidomys_tridecemlineatus
ENSXCOG00000020255	chd2	100	69.319	ENSJJAG00000000213	Chd2	96	69.605	Jaculus_jaculus
ENSXCOG00000020255	chd2	86	86.729	ENSKMAG00000015849	chd2	99	87.198	Kryptolebias_marmoratus
ENSXCOG00000020255	chd2	74	74.867	ENSLAFG00000016885	-	98	81.649	Loxodonta_africana
ENSXCOG00000020255	chd2	100	68.421	ENSMFAG00000033343	-	96	69.678	Macaca_fascicularis
ENSXCOG00000020255	chd2	99	69.405	ENSMMUG00000011782	-	96	69.678	Macaca_mulatta
ENSXCOG00000020255	chd2	99	69.163	ENSMNEG00000036875	-	96	69.430	Macaca_nemestrina
ENSXCOG00000020255	chd2	99	69.405	ENSMLEG00000035026	-	96	69.678	Mandrillus_leucophaeus
ENSXCOG00000020255	chd2	99	89.412	ENSMAMG00000009082	chd2	96	90.566	Mastacembelus_armatus
ENSXCOG00000020255	chd2	99	85.484	ENSMZEG00005021333	chd2	99	85.665	Maylandia_zebra
ENSXCOG00000020255	chd2	100	69.045	ENSMICG00000000332	-	97	68.870	Microcebus_murinus
ENSXCOG00000020255	chd2	99	69.520	ENSMOCG00000015124	Chd2	96	69.644	Microtus_ochrogaster
ENSXCOG00000020255	chd2	99	72.897	ENSMODG00000013158	-	91	75.862	Monodelphis_domestica
ENSXCOG00000020255	chd2	99	85.543	ENSMALG00000007755	chd2	99	85.763	Monopterus_albus
ENSXCOG00000020255	chd2	99	69.596	MGP_CAROLIEiJ_G0029860	Chd2	96	69.479	Mus_caroli
ENSXCOG00000020255	chd2	100	69.319	ENSMUSG00000078671	Chd2	96	69.548	Mus_musculus
ENSXCOG00000020255	chd2	99	69.592	MGP_PahariEiJ_G0013082	Chd2	96	69.531	Mus_pahari
ENSXCOG00000020255	chd2	99	69.608	MGP_SPRETEiJ_G0030962	Chd2	96	69.492	Mus_spretus
ENSXCOG00000020255	chd2	99	69.697	ENSMPUG00000017577	-	96	69.882	Mustela_putorius_furo
ENSXCOG00000020255	chd2	100	69.336	ENSMLUG00000009292	-	96	68.908	Myotis_lucifugus
ENSXCOG00000020255	chd2	99	69.664	ENSNGAG00000010792	Chd2	96	69.735	Nannospalax_galili
ENSXCOG00000020255	chd2	99	86.979	ENSNBRG00000020591	chd2	99	87.221	Neolamprologus_brichardi
ENSXCOG00000020255	chd2	99	67.530	ENSNLEG00000012349	-	95	69.147	Nomascus_leucogenys
ENSXCOG00000020255	chd2	70	78.158	ENSMEUG00000001522	-	66	78.158	Notamacropus_eugenii
ENSXCOG00000020255	chd2	100	68.392	ENSODEG00000016028	-	96	69.131	Octodon_degus
ENSXCOG00000020255	chd2	99	90.588	ENSONIG00000015136	chd2	96	91.429	Oreochromis_niloticus
ENSXCOG00000020255	chd2	90	68.670	ENSOANG00000004385	-	99	68.710	Ornithorhynchus_anatinus
ENSXCOG00000020255	chd2	99	65.225	ENSOCUG00000001628	-	93	75.130	Oryctolagus_cuniculus
ENSXCOG00000020255	chd2	99	88.235	ENSORLG00000008403	chd2	99	84.672	Oryzias_latipes
ENSXCOG00000020255	chd2	99	87.952	ENSORLG00020004138	chd2	96	86.491	Oryzias_latipes_hni
ENSXCOG00000020255	chd2	100	89.623	ENSOMEG00000005831	chd2	96	82.174	Oryzias_melastigma
ENSXCOG00000020255	chd2	99	67.530	ENSOGAG00000010399	-	96	67.307	Otolemur_garnettii
ENSXCOG00000020255	chd2	99	70.843	ENSOARG00000010343	-	96	71.363	Ovis_aries
ENSXCOG00000020255	chd2	99	68.639	ENSPPAG00000030381	-	96	69.083	Pan_paniscus
ENSXCOG00000020255	chd2	99	69.405	ENSPTRG00000007478	CHD2	96	69.678	Pan_troglodytes
ENSXCOG00000020255	chd2	99	66.703	ENSPANG00000033355	-	96	66.911	Papio_anubis
ENSXCOG00000020255	chd2	99	79.976	ENSPKIG00000000495	chd2	96	79.526	Paramormyrops_kingsleyae
ENSXCOG00000020255	chd2	87	82.446	ENSPMGG00000009941	chd2	99	82.446	Periophthalmus_magnuspinnatus
ENSXCOG00000020255	chd2	99	69.608	ENSPEMG00000019507	Chd2	96	69.848	Peromyscus_maniculatus_bairdii
ENSXCOG00000020255	chd2	94	72.869	ENSPCIG00000009417	-	99	77.049	Phascolarctos_cinereus
ENSXCOG00000020255	chd2	99	97.647	ENSPFOG00000007050	chd2	96	98.113	Poecilia_formosa
ENSXCOG00000020255	chd2	99	98.824	ENSPLAG00000005067	chd2	96	99.057	Poecilia_latipinna
ENSXCOG00000020255	chd2	99	97.647	ENSPMEG00000019628	chd2	96	98.113	Poecilia_mexicana
ENSXCOG00000020255	chd2	99	68.137	ENSPPYG00000006799	-	96	68.379	Pongo_abelii
ENSXCOG00000020255	chd2	100	69.007	ENSPCOG00000028084	-	96	69.808	Propithecus_coquereli
ENSXCOG00000020255	chd2	99	85.476	ENSPNYG00000010273	chd2	99	85.714	Pundamilia_nyererei
ENSXCOG00000020255	chd2	99	75.754	ENSPNAG00000016719	chd2	74	82.210	Pygocentrus_nattereri
ENSXCOG00000020255	chd2	100	69.759	ENSRNOG00000012716	Chd2	96	69.960	Rattus_norvegicus
ENSXCOG00000020255	chd2	99	68.667	ENSRBIG00000036875	-	96	68.924	Rhinopithecus_bieti
ENSXCOG00000020255	chd2	99	69.405	ENSRROG00000041087	-	96	69.678	Rhinopithecus_roxellana
ENSXCOG00000020255	chd2	99	69.388	ENSSBOG00000023754	-	96	69.661	Saimiri_boliviensis_boliviensis
ENSXCOG00000020255	chd2	99	72.869	ENSSHAG00000012513	-	96	69.438	Sarcophilus_harrisii
ENSXCOG00000020255	chd2	100	81.132	ENSSFOG00015023759	chd2	96	81.132	Scleropages_formosus
ENSXCOG00000020255	chd2	99	86.991	ENSSMAG00000001726	chd2	96	91.509	Scophthalmus_maximus
ENSXCOG00000020255	chd2	99	87.522	ENSSLDG00000001146	chd2	99	87.348	Seriola_lalandi_dorsalis
ENSXCOG00000020255	chd2	74	81.667	ENSSARG00000014112	-	66	82.842	Sorex_araneus
ENSXCOG00000020255	chd2	100	67.869	ENSSPUG00000011266	-	93	75.862	Sphenodon_punctatus
ENSXCOG00000020255	chd2	99	87.307	ENSSPAG00000016452	chd2	99	87.321	Stegastes_partitus
ENSXCOG00000020255	chd2	99	69.604	ENSSSCG00000002266	-	100	72.995	Sus_scrofa
ENSXCOG00000020255	chd2	97	69.808	ENSTGUG00000008540	-	97	69.960	Taeniopygia_guttata
ENSXCOG00000020255	chd2	88	84.530	ENSTRUG00000008842	chd2	87	87.736	Takifugu_rubripes
ENSXCOG00000020255	chd2	90	88.335	ENSTNIG00000010760	chd2	95	89.110	Tetraodon_nigroviridis
ENSXCOG00000020255	chd2	72	73.128	ENSTBEG00000017730	-	74	73.128	Tupaia_belangeri
ENSXCOG00000020255	chd2	87	75.809	ENSTTRG00000000430	-	84	75.879	Tursiops_truncatus
ENSXCOG00000020255	chd2	99	68.270	ENSUMAG00000000083	-	96	67.724	Ursus_maritimus
ENSXCOG00000020255	chd2	82	86.980	ENSVPAG00000009645	-	82	86.799	Vicugna_pacos
ENSXCOG00000020255	chd2	94	66.586	ENSXETG00000024129	chd2	71	77.461	Xenopus_tropicalis
ENSXCOG00000020255	chd2	100	97.158	ENSXMAG00000002707	chd2	98	97.158	Xiphophorus_maculatus