EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000020357 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 6286 bases
Position: chrKQ557212.1:12617013-12623298
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027260	RRM_1	PF00076.22	2.1e-14	1	2
ENSXCOP00000027260	RRM_1	PF00076.22	2.1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027593	-	1413	-	ENSXCOP00000027260	470 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020357	rbm28	99	52.201	ENSG00000106344	RBM28	71	53.986	Homo_sapiens
ENSXCOG00000020357	rbm28	90	68.565	ENSAPOG00000015512	rbm28	59	68.374	Acanthochromis_polyacanthus
ENSXCOG00000020357	rbm28	99	50.410	ENSAMEG00000004776	RBM28	55	52.667	Ailuropoda_melanoleuca
ENSXCOG00000020357	rbm28	87	66.906	ENSACIG00000023153	rbm28	91	66.906	Amphilophus_citrinellus
ENSXCOG00000020357	rbm28	90	68.565	ENSAOCG00000000462	rbm28	58	68.374	Amphiprion_ocellaris
ENSXCOG00000020357	rbm28	90	68.337	ENSAPEG00000012996	rbm28	59	68.151	Amphiprion_percula
ENSXCOG00000020357	rbm28	92	61.522	ENSATEG00000001672	rbm28	61	61.522	Anabas_testudineus
ENSXCOG00000020357	rbm28	99	50.734	ENSANAG00000033922	RBM28	71	52.620	Aotus_nancymaae
ENSXCOG00000020357	rbm28	98	66.250	ENSACLG00000025024	rbm28	59	68.653	Astatotilapia_calliptera
ENSXCOG00000020357	rbm28	91	59.633	ENSAMXG00000000763	rbm28	99	59.080	Astyanax_mexicanus
ENSXCOG00000020357	rbm28	98	52.442	ENSBTAG00000017001	RBM28	72	53.968	Bos_taurus
ENSXCOG00000020357	rbm28	99	50.524	ENSCJAG00000017731	RBM28	82	52.164	Callithrix_jacchus
ENSXCOG00000020357	rbm28	99	52.830	ENSCAFG00000001667	RBM28	58	54.214	Canis_familiaris
ENSXCOG00000020357	rbm28	99	52.830	ENSCAFG00020021648	RBM28	58	54.214	Canis_lupus_dingo
ENSXCOG00000020357	rbm28	98	51.357	ENSCHIG00000014146	RBM28	59	52.667	Capra_hircus
ENSXCOG00000020357	rbm28	96	52.620	ENSTSYG00000002892	RBM28	72	53.409	Carlito_syrichta
ENSXCOG00000020357	rbm28	87	40.048	ENSCAPG00000013218	RBM28	56	40.860	Cavia_aperea
ENSXCOG00000020357	rbm28	99	52.830	ENSCPOG00000006253	RBM28	58	53.968	Cavia_porcellus
ENSXCOG00000020357	rbm28	98	50.851	ENSCCAG00000035105	RBM28	71	52.392	Cebus_capucinus
ENSXCOG00000020357	rbm28	99	51.782	ENSCATG00000040497	RBM28	71	53.303	Cercocebus_atys
ENSXCOG00000020357	rbm28	98	51.805	ENSCLAG00000003707	RBM28	60	53.394	Chinchilla_lanigera
ENSXCOG00000020357	rbm28	99	51.992	ENSCSAG00000010161	RBM28	58	53.531	Chlorocebus_sabaeus
ENSXCOG00000020357	rbm28	81	47.973	ENSCPBG00000018088	RBM28	77	49.157	Chrysemys_picta_bellii
ENSXCOG00000020357	rbm28	98	36.049	ENSCING00000009238	-	53	37.393	Ciona_intestinalis
ENSXCOG00000020357	rbm28	69	43.636	ENSCSAVG00000007149	-	94	42.727	Ciona_savignyi
ENSXCOG00000020357	rbm28	77	56.017	ENSCANG00000038397	RBM28	58	60.099	Colobus_angolensis_palliatus
ENSXCOG00000020357	rbm28	99	52.521	ENSCGRG00001021278	Rbm28	56	53.986	Cricetulus_griseus_chok1gshd
ENSXCOG00000020357	rbm28	99	52.521	ENSCGRG00000005098	Rbm28	58	53.986	Cricetulus_griseus_crigri
ENSXCOG00000020357	rbm28	92	63.496	ENSCSEG00000004212	rbm28	61	63.656	Cynoglossus_semilaevis
ENSXCOG00000020357	rbm28	92	77.060	ENSCVAG00000010493	rbm28	62	74.105	Cyprinodon_variegatus
ENSXCOG00000020357	rbm28	92	55.357	ENSDARG00000025332	rbm28	57	51.829	Danio_rerio
ENSXCOG00000020357	rbm28	99	50.943	ENSDNOG00000001124	RBM28	58	52.045	Dasypus_novemcinctus
ENSXCOG00000020357	rbm28	99	50.410	ENSDORG00000004184	Rbm28	87	52.596	Dipodomys_ordii
ENSXCOG00000020357	rbm28	68	40.122	FBgn0260456	CG4806	68	34.848	Drosophila_melanogaster
ENSXCOG00000020357	rbm28	87	48.449	ENSETEG00000007130	RBM28	56	48.449	Echinops_telfairi
ENSXCOG00000020357	rbm28	94	40.618	ENSEBUG00000004419	rbm28	60	41.014	Eptatretus_burgeri
ENSXCOG00000020357	rbm28	99	52.510	ENSEASG00005008528	RBM28	57	54.318	Equus_asinus_asinus
ENSXCOG00000020357	rbm28	99	51.867	ENSECAG00000007745	RBM28	57	53.604	Equus_caballus
ENSXCOG00000020357	rbm28	99	46.778	ENSEEUG00000002389	RBM28	58	48.206	Erinaceus_europaeus
ENSXCOG00000020357	rbm28	91	58.315	ENSELUG00000020602	rbm28	59	58.315	Esox_lucius
ENSXCOG00000020357	rbm28	99	53.125	ENSFCAG00000000946	RBM28	72	54.214	Felis_catus
ENSXCOG00000020357	rbm28	98	52.000	ENSFDAG00000010169	RBM28	59	53.229	Fukomys_damarensis
ENSXCOG00000020357	rbm28	91	58.525	ENSGMOG00000007091	rbm28	60	58.525	Gadus_morhua
ENSXCOG00000020357	rbm28	92	87.946	ENSGAFG00000004802	rbm28	98	87.946	Gambusia_affinis
ENSXCOG00000020357	rbm28	90	66.366	ENSGACG00000012612	rbm28	74	66.368	Gasterosteus_aculeatus
ENSXCOG00000020357	rbm28	88	42.009	ENSGAGG00000008873	RBM28	52	56.150	Gopherus_agassizii
ENSXCOG00000020357	rbm28	99	51.464	ENSGGOG00000004644	RBM28	59	53.986	Gorilla_gorilla
ENSXCOG00000020357	rbm28	89	67.130	ENSHBUG00000009611	rbm28	56	69.042	Haplochromis_burtoni
ENSXCOG00000020357	rbm28	100	50.000	ENSHGLG00000005409	RBM28	59	52.232	Heterocephalus_glaber_female
ENSXCOG00000020357	rbm28	100	50.000	ENSHGLG00100016458	RBM28	59	52.232	Heterocephalus_glaber_male
ENSXCOG00000020357	rbm28	92	56.293	ENSHCOG00000010597	rbm28	57	56.293	Hippocampus_comes
ENSXCOG00000020357	rbm28	88	50.948	ENSIPUG00000007103	rbm28	81	51.069	Ictalurus_punctatus
ENSXCOG00000020357	rbm28	99	50.102	ENSSTOG00000002169	RBM28	57	51.220	Ictidomys_tridecemlineatus
ENSXCOG00000020357	rbm28	87	53.191	ENSJJAG00000022400	Rbm28	59	53.428	Jaculus_jaculus
ENSXCOG00000020357	rbm28	92	69.752	ENSKMAG00000013348	rbm28	59	69.752	Kryptolebias_marmoratus
ENSXCOG00000020357	rbm28	92	65.188	ENSLBEG00000012998	rbm28	57	65.188	Labrus_bergylta
ENSXCOG00000020357	rbm28	97	55.180	ENSLOCG00000015541	rbm28	53	56.982	Lepisosteus_oculatus
ENSXCOG00000020357	rbm28	99	51.992	ENSLAFG00000010717	RBM28	58	54.233	Loxodonta_africana
ENSXCOG00000020357	rbm28	99	51.992	ENSMFAG00000031036	RBM28	71	53.531	Macaca_fascicularis
ENSXCOG00000020357	rbm28	99	51.992	ENSMMUG00000007250	RBM28	71	53.531	Macaca_mulatta
ENSXCOG00000020357	rbm28	99	52.000	ENSMNEG00000036970	RBM28	70	53.531	Macaca_nemestrina
ENSXCOG00000020357	rbm28	92	68.071	ENSMAMG00000008525	rbm28	59	67.627	Mastacembelus_armatus
ENSXCOG00000020357	rbm28	98	66.250	ENSMZEG00005019625	rbm28	64	68.653	Maylandia_zebra
ENSXCOG00000020357	rbm28	99	52.000	ENSMAUG00000002263	Rbm28	56	53.759	Mesocricetus_auratus
ENSXCOG00000020357	rbm28	99	52.830	ENSMICG00000000107	RBM28	61	54.176	Microcebus_murinus
ENSXCOG00000020357	rbm28	99	51.782	ENSMOCG00000014615	Rbm28	59	53.409	Microtus_ochrogaster
ENSXCOG00000020357	rbm28	91	62.587	ENSMMOG00000008600	rbm28	90	62.125	Mola_mola
ENSXCOG00000020357	rbm28	99	52.610	ENSMODG00000015151	RBM28	58	54.402	Monodelphis_domestica
ENSXCOG00000020357	rbm28	91	65.843	ENSMALG00000006419	rbm28	57	65.843	Monopterus_albus
ENSXCOG00000020357	rbm28	97	52.146	MGP_CAROLIEiJ_G0028162	Rbm28	59	53.515	Mus_caroli
ENSXCOG00000020357	rbm28	99	51.745	ENSMUSG00000029701	Rbm28	59	54.195	Mus_musculus
ENSXCOG00000020357	rbm28	99	51.540	MGP_PahariEiJ_G0021920	Rbm28	58	53.741	Mus_pahari
ENSXCOG00000020357	rbm28	99	51.335	MGP_SPRETEiJ_G0029162	Rbm28	59	53.741	Mus_spretus
ENSXCOG00000020357	rbm28	99	51.357	ENSMPUG00000006511	RBM28	58	53.167	Mustela_putorius_furo
ENSXCOG00000020357	rbm28	99	50.826	ENSMLUG00000002186	RBM28	58	52.727	Myotis_lucifugus
ENSXCOG00000020357	rbm28	99	50.210	ENSNGAG00000006480	-	59	52.968	Nannospalax_galili
ENSXCOG00000020357	rbm28	99	48.441	ENSNGAG00000017946	-	57	50.917	Nannospalax_galili
ENSXCOG00000020357	rbm28	99	51.992	ENSNLEG00000012307	RBM28	70	53.759	Nomascus_leucogenys
ENSXCOG00000020357	rbm28	95	47.162	ENSMEUG00000009611	RBM28	61	49.206	Notamacropus_eugenii
ENSXCOG00000020357	rbm28	99	49.478	ENSODEG00000003213	-	57	51.253	Octodon_degus
ENSXCOG00000020357	rbm28	81	52.551	ENSODEG00000013217	-	58	54.220	Octodon_degus
ENSXCOG00000020357	rbm28	92	68.820	ENSONIG00000014924	rbm28	59	69.265	Oreochromis_niloticus
ENSXCOG00000020357	rbm28	96	46.875	ENSOANG00000000815	-	59	47.391	Ornithorhynchus_anatinus
ENSXCOG00000020357	rbm28	99	52.720	ENSOCUG00000003009	RBM28	57	54.649	Oryctolagus_cuniculus
ENSXCOG00000020357	rbm28	91	68.265	ENSORLG00000009636	rbm28	64	62.708	Oryzias_latipes
ENSXCOG00000020357	rbm28	91	68.493	ENSORLG00020002123	rbm28	61	68.493	Oryzias_latipes_hni
ENSXCOG00000020357	rbm28	91	66.897	ENSORLG00015015030	rbm28	65	66.897	Oryzias_latipes_hsok
ENSXCOG00000020357	rbm28	91	69.128	ENSOMEG00000007801	rbm28	59	69.128	Oryzias_melastigma
ENSXCOG00000020357	rbm28	99	51.148	ENSOGAG00000006011	RBM28	70	53.547	Otolemur_garnettii
ENSXCOG00000020357	rbm28	99	51.235	ENSOARG00000002547	RBM28	59	52.667	Ovis_aries
ENSXCOG00000020357	rbm28	99	51.782	ENSPPAG00000041730	RBM28	71	53.531	Pan_paniscus
ENSXCOG00000020357	rbm28	99	52.917	ENSPPRG00000004420	RBM28	72	53.531	Panthera_pardus
ENSXCOG00000020357	rbm28	99	53.542	ENSPTIG00000008550	RBM28	72	54.214	Panthera_tigris_altaica
ENSXCOG00000020357	rbm28	99	52.201	ENSPTRG00000019659	RBM28	71	53.986	Pan_troglodytes
ENSXCOG00000020357	rbm28	99	51.782	ENSPANG00000022295	RBM28	71	53.531	Papio_anubis
ENSXCOG00000020357	rbm28	91	53.830	ENSPKIG00000023453	rbm28	62	53.112	Paramormyrops_kingsleyae
ENSXCOG00000020357	rbm28	88	62.708	ENSPMGG00000012840	rbm28	58	62.708	Periophthalmus_magnuspinnatus
ENSXCOG00000020357	rbm28	99	51.464	ENSPEMG00000020673	Rbm28	61	53.075	Peromyscus_maniculatus_bairdii
ENSXCOG00000020357	rbm28	76	40.212	ENSPMAG00000002948	-	99	41.935	Petromyzon_marinus
ENSXCOG00000020357	rbm28	96	51.634	ENSPCIG00000012810	RBM28	59	52.727	Phascolarctos_cinereus
ENSXCOG00000020357	rbm28	92	86.607	ENSPFOG00000018209	rbm28	59	86.607	Poecilia_formosa
ENSXCOG00000020357	rbm28	91	86.456	ENSPLAG00000016078	rbm28	56	86.456	Poecilia_latipinna
ENSXCOG00000020357	rbm28	92	86.414	ENSPMEG00000004292	rbm28	59	86.414	Poecilia_mexicana
ENSXCOG00000020357	rbm28	91	86.517	ENSPREG00000014287	rbm28	85	78.906	Poecilia_reticulata
ENSXCOG00000020357	rbm28	99	51.782	ENSPPYG00000017975	RBM28	58	53.531	Pongo_abelii
ENSXCOG00000020357	rbm28	74	50.000	ENSPCAG00000008223	RBM28	53	49.727	Procavia_capensis
ENSXCOG00000020357	rbm28	99	52.731	ENSPCOG00000016797	RBM28	70	54.214	Propithecus_coquereli
ENSXCOG00000020357	rbm28	97	66.318	ENSPNYG00000014003	rbm28	59	68.433	Pundamilia_nyererei
ENSXCOG00000020357	rbm28	99	50.412	ENSRNOG00000005468	Rbm28	58	53.303	Rattus_norvegicus
ENSXCOG00000020357	rbm28	99	51.782	ENSRBIG00000033990	RBM28	70	53.303	Rhinopithecus_bieti
ENSXCOG00000020357	rbm28	99	51.992	ENSRROG00000040747	RBM28	71	53.531	Rhinopithecus_roxellana
ENSXCOG00000020357	rbm28	99	50.515	ENSSHAG00000017017	RBM28	60	53.580	Sarcophilus_harrisii
ENSXCOG00000020357	rbm28	91	55.631	ENSSFOG00015001231	rbm28	60	55.631	Scleropages_formosus
ENSXCOG00000020357	rbm28	93	67.793	ENSSMAG00000003885	rbm28	90	68.707	Scophthalmus_maximus
ENSXCOG00000020357	rbm28	92	68.584	ENSSDUG00000014270	rbm28	97	63.984	Seriola_dumerili
ENSXCOG00000020357	rbm28	92	67.699	ENSSLDG00000020099	rbm28	59	67.401	Seriola_lalandi_dorsalis
ENSXCOG00000020357	rbm28	76	56.065	ENSSARG00000008303	RBM28	53	55.409	Sorex_araneus
ENSXCOG00000020357	rbm28	90	49.095	ENSSPUG00000000838	RBM28	82	49.889	Sphenodon_punctatus
ENSXCOG00000020357	rbm28	91	67.416	ENSSPAG00000023305	rbm28	62	67.920	Stegastes_partitus
ENSXCOG00000020357	rbm28	99	52.174	ENSSSCG00000031847	RBM28	58	54.525	Sus_scrofa
ENSXCOG00000020357	rbm28	92	61.572	ENSTRUG00000013311	rbm28	58	61.572	Takifugu_rubripes
ENSXCOG00000020357	rbm28	99	62.062	ENSTNIG00000017962	rbm28	59	64.967	Tetraodon_nigroviridis
ENSXCOG00000020357	rbm28	97	52.442	ENSTTRG00000013647	RBM28	58	53.587	Tursiops_truncatus
ENSXCOG00000020357	rbm28	99	47.531	ENSUAMG00000006949	RBM28	60	49.318	Ursus_americanus
ENSXCOG00000020357	rbm28	99	52.000	ENSUMAG00000005997	RBM28	58	53.759	Ursus_maritimus
ENSXCOG00000020357	rbm28	99	46.947	ENSVPAG00000008304	RBM28	59	48.073	Vicugna_pacos
ENSXCOG00000020357	rbm28	99	52.830	ENSVVUG00000007270	RBM28	58	54.091	Vulpes_vulpes
ENSXCOG00000020357	rbm28	99	48.665	ENSXETG00000009271	rbm28	58	51.435	Xenopus_tropicalis
ENSXCOG00000020357	rbm28	91	92.325	ENSXMAG00000004415	rbm28	64	87.835	Xiphophorus_maculatus