EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000020358 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 413 bases
Position: chrKQ557212.1:12626239-12626651
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027261	RRM_1	PF00076.22	4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027594	-	270	-	ENSXCOP00000027261	89 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020358's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000020358	-	82	35.065	ENSXCOG00000008262	cirbpa	77	36.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020358	-	96	62.069	ENSG00000106344	RBM28	55	41.964	Homo_sapiens
ENSXCOG00000020358	-	84	82.895	ENSACIG00000023163	-	87	82.895	Amphilophus_citrinellus
ENSXCOG00000020358	-	96	59.770	ENSAMXG00000043026	-	77	62.667	Astyanax_mexicanus
ENSXCOG00000020358	-	96	62.069	ENSDORG00000028147	-	60	61.538	Dipodomys_ordii
ENSXCOG00000020358	-	65	93.333	ENSFHEG00000007895	-	63	93.333	Fundulus_heteroclitus
ENSXCOG00000020358	-	100	92.308	ENSGAFG00000004817	-	100	92.308	Gambusia_affinis
ENSXCOG00000020358	-	90	65.854	ENSIPUG00000007127	-	74	68.493	Ictalurus_punctatus
ENSXCOG00000020358	-	99	74.444	ENSMMOG00000008605	-	73	74.444	Mola_mola
ENSXCOG00000020358	-	97	79.070	ENSNBRG00000022844	-	77	85.333	Neolamprologus_brichardi
ENSXCOG00000020358	-	85	65.385	ENSPNAG00000022784	-	81	65.385	Pygocentrus_nattereri
ENSXCOG00000020358	-	100	78.022	ENSSMAG00000003917	-	83	78.022	Scophthalmus_maximus
ENSXCOG00000020358	-	98	78.652	ENSSDUG00000014292	-	88	78.652	Seriola_dumerili