EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000020437 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-93g23.2
Alias: -
Full Name: si:ch211-93g23.2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1967 bases
Position: chrKQ557217.1:8854782-8856748
Accession: ZDB-GENE-090312-164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027369	Methyltransf_31	PF13847.6	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027702	-	477	-	ENSXCOP00000027369	158 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000020437	si:ch211-93g23.2	98	49.091	ENSXCOG00000014529	zgc:162396	61	49.091
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSXCOG00000014527	zgc:162780	59	53.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020437	si:ch211-93g23.2	97	70.807	ENSAPOG00000008054	si:ch211-93g23.2	59	70.807	Acanthochromis_polyacanthus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSAPOG00000015391	zgc:162780	59	55.215	Acanthochromis_polyacanthus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.828	ENSACIG00000015409	zgc:162780	58	55.828	Amphilophus_citrinellus
ENSXCOG00000020437	si:ch211-93g23.2	100	66.265	ENSACIG00000024058	si:ch211-93g23.2	89	66.265	Amphilophus_citrinellus
ENSXCOG00000020437	si:ch211-93g23.2	97	56.442	ENSAOCG00000004147	zgc:162780	59	56.442	Amphiprion_ocellaris
ENSXCOG00000020437	si:ch211-93g23.2	97	72.671	ENSAOCG00000000447	-	59	72.671	Amphiprion_ocellaris
ENSXCOG00000020437	si:ch211-93g23.2	97	70.186	ENSAPEG00000012843	si:ch211-93g23.2	99	70.186	Amphiprion_percula
ENSXCOG00000020437	si:ch211-93g23.2	97	56.875	ENSAPEG00000008212	zgc:162780	59	56.875	Amphiprion_percula
ENSXCOG00000020437	si:ch211-93g23.2	97	54.601	ENSATEG00000011843	zgc:162780	59	54.601	Anabas_testudineus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSACLG00000006922	zgc:162780	59	55.215	Astatotilapia_calliptera
ENSXCOG00000020437	si:ch211-93g23.2	97	67.702	ENSACLG00000009543	si:ch211-93g23.2	60	67.702	Astatotilapia_calliptera
ENSXCOG00000020437	si:ch211-93g23.2	97	58.282	ENSAMXG00000040257	zgc:162780	59	58.282	Astyanax_mexicanus
ENSXCOG00000020437	si:ch211-93g23.2	97	53.988	ENSCVAG00000021445	zgc:162780	59	53.988	Cyprinodon_variegatus
ENSXCOG00000020437	si:ch211-93g23.2	100	77.711	ENSCVAG00000012310	si:ch211-93g23.2	100	77.711	Cyprinodon_variegatus
ENSXCOG00000020437	si:ch211-93g23.2	97	58.025	ENSDARG00000070558	si:ch211-93g23.2	59	58.025	Danio_rerio
ENSXCOG00000020437	si:ch211-93g23.2	97	60.494	ENSDARG00000069548	zgc:162780	59	60.494	Danio_rerio
ENSXCOG00000020437	si:ch211-93g23.2	73	61.290	ENSELUG00000002477	si:ch211-93g23.2	79	61.290	Esox_lucius
ENSXCOG00000020437	si:ch211-93g23.2	97	60.736	ENSELUG00000005357	zgc:162780	65	62.222	Esox_lucius
ENSXCOG00000020437	si:ch211-93g23.2	97	53.988	ENSFHEG00000005204	zgc:162780	59	53.988	Fundulus_heteroclitus
ENSXCOG00000020437	si:ch211-93g23.2	75	60.833	ENSGMOG00000005502	zgc:162780	52	60.833	Gadus_morhua
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSGAFG00000018382	zgc:162780	59	53.374	Gambusia_affinis
ENSXCOG00000020437	si:ch211-93g23.2	97	85.535	ENSGAFG00000007683	si:ch211-93g23.2	58	85.535	Gambusia_affinis
ENSXCOG00000020437	si:ch211-93g23.2	97	68.712	ENSGACG00000014722	si:ch211-93g23.2	60	68.712	Gasterosteus_aculeatus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSHBUG00000000524	zgc:162780	59	55.215	Haplochromis_burtoni
ENSXCOG00000020437	si:ch211-93g23.2	97	67.702	ENSHBUG00000004418	si:ch211-93g23.2	95	66.667	Haplochromis_burtoni
ENSXCOG00000020437	si:ch211-93g23.2	99	57.927	ENSHCOG00000009980	si:ch211-93g23.2	94	59.868	Hippocampus_comes
ENSXCOG00000020437	si:ch211-93g23.2	97	53.988	ENSKMAG00000018418	zgc:162780	58	53.988	Kryptolebias_marmoratus
ENSXCOG00000020437	si:ch211-93g23.2	97	72.500	ENSLBEG00000013961	si:ch211-93g23.2	90	72.611	Labrus_bergylta
ENSXCOG00000020437	si:ch211-93g23.2	97	73.125	ENSLBEG00000006987	-	59	73.125	Labrus_bergylta
ENSXCOG00000020437	si:ch211-93g23.2	97	57.055	ENSLBEG00000026521	zgc:162780	59	57.055	Labrus_bergylta
ENSXCOG00000020437	si:ch211-93g23.2	97	57.055	ENSMAMG00000013237	zgc:162780	59	57.055	Mastacembelus_armatus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSMZEG00005000825	zgc:162780	59	55.215	Maylandia_zebra
ENSXCOG00000020437	si:ch211-93g23.2	97	67.702	ENSMZEG00005014627	si:ch211-93g23.2	60	67.702	Maylandia_zebra
ENSXCOG00000020437	si:ch211-93g23.2	100	67.722	ENSMMOG00000019634	si:ch211-93g23.2	98	67.722	Mola_mola
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSMALG00000012598	zgc:162780	59	55.215	Monopterus_albus
ENSXCOG00000020437	si:ch211-93g23.2	99	67.485	ENSNBRG00000019105	si:ch211-93g23.2	94	67.485	Neolamprologus_brichardi
ENSXCOG00000020437	si:ch211-93g23.2	97	56.604	ENSNBRG00000014908	zgc:162780	59	56.604	Neolamprologus_brichardi
ENSXCOG00000020437	si:ch211-93g23.2	97	68.944	ENSONIG00000013383	si:ch211-93g23.2	60	68.944	Oreochromis_niloticus
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSONIG00000004462	zgc:162780	59	55.215	Oreochromis_niloticus
ENSXCOG00000020437	si:ch211-93g23.2	97	68.944	ENSORLG00000002372	si:ch211-93g23.2	60	68.944	Oryzias_latipes
ENSXCOG00000020437	si:ch211-93g23.2	97	68.323	ENSORLG00020022021	si:ch211-93g23.2	60	68.323	Oryzias_latipes_hni
ENSXCOG00000020437	si:ch211-93g23.2	97	68.944	ENSORLG00015021473	si:ch211-93g23.2	60	68.944	Oryzias_latipes_hsok
ENSXCOG00000020437	si:ch211-93g23.2	97	55.828	ENSORLG00015008510	zgc:162780	59	55.828	Oryzias_latipes_hsok
ENSXCOG00000020437	si:ch211-93g23.2	97	69.565	ENSOMEG00000013365	si:ch211-93g23.2	60	69.565	Oryzias_melastigma
ENSXCOG00000020437	si:ch211-93g23.2	97	55.215	ENSOMEG00000010679	zgc:162780	59	55.215	Oryzias_melastigma
ENSXCOG00000020437	si:ch211-93g23.2	99	58.788	ENSPKIG00000011610	si:ch211-93g23.2	60	58.788	Paramormyrops_kingsleyae
ENSXCOG00000020437	si:ch211-93g23.2	99	63.415	ENSPMGG00000011829	si:ch211-93g23.2	96	63.415	Periophthalmus_magnuspinnatus
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSPFOG00000002781	zgc:162780	59	53.374	Poecilia_formosa
ENSXCOG00000020437	si:ch211-93g23.2	97	88.199	ENSPFOG00000013857	si:ch211-93g23.2	59	88.199	Poecilia_formosa
ENSXCOG00000020437	si:ch211-93g23.2	100	89.634	ENSPLAG00000015878	-	100	89.634	Poecilia_latipinna
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSPLAG00000010255	zgc:162780	59	53.374	Poecilia_latipinna
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSPMEG00000000022	zgc:162780	62	53.374	Poecilia_mexicana
ENSXCOG00000020437	si:ch211-93g23.2	100	89.024	ENSPMEG00000008837	-	100	89.024	Poecilia_mexicana
ENSXCOG00000020437	si:ch211-93g23.2	97	52.761	ENSPREG00000016480	zgc:162780	58	52.761	Poecilia_reticulata
ENSXCOG00000020437	si:ch211-93g23.2	100	86.667	ENSPREG00000016831	si:ch211-93g23.2	100	86.667	Poecilia_reticulata
ENSXCOG00000020437	si:ch211-93g23.2	97	67.081	ENSPNYG00000009369	si:ch211-93g23.2	95	66.061	Pundamilia_nyererei
ENSXCOG00000020437	si:ch211-93g23.2	97	56.790	ENSPNYG00000009882	zgc:162780	59	56.790	Pundamilia_nyererei
ENSXCOG00000020437	si:ch211-93g23.2	99	58.599	ENSPNAG00000026108	zgc:162780	59	58.599	Pygocentrus_nattereri
ENSXCOG00000020437	si:ch211-93g23.2	99	52.727	ENSSFOG00015018587	si:ch211-93g23.2	60	52.727	Scleropages_formosus
ENSXCOG00000020437	si:ch211-93g23.2	97	57.669	ENSSMAG00000004498	zgc:162780	59	57.669	Scophthalmus_maximus
ENSXCOG00000020437	si:ch211-93g23.2	97	75.316	ENSSDUG00000022311	si:ch211-93g23.2	99	75.316	Seriola_dumerili
ENSXCOG00000020437	si:ch211-93g23.2	97	56.604	ENSSDUG00000010324	zgc:162780	59	56.604	Seriola_dumerili
ENSXCOG00000020437	si:ch211-93g23.2	97	54.601	ENSSLDG00000021444	zgc:162780	63	53.254	Seriola_lalandi_dorsalis
ENSXCOG00000020437	si:ch211-93g23.2	97	69.565	ENSSLDG00000005926	si:ch211-93g23.2	60	69.565	Seriola_lalandi_dorsalis
ENSXCOG00000020437	si:ch211-93g23.2	99	72.500	ENSSPAG00000014251	si:ch211-93g23.2	92	72.500	Stegastes_partitus
ENSXCOG00000020437	si:ch211-93g23.2	97	66.460	ENSTRUG00000014609	si:ch211-93g23.2	59	66.460	Takifugu_rubripes
ENSXCOG00000020437	si:ch211-93g23.2	97	66.049	ENSTNIG00000000686	-	60	66.049	Tetraodon_nigroviridis
ENSXCOG00000020437	si:ch211-93g23.2	97	94.410	ENSXMAG00000007855	si:ch211-93g23.2	59	94.410	Xiphophorus_maculatus
ENSXCOG00000020437	si:ch211-93g23.2	97	53.374	ENSXMAG00000026715	zgc:162780	59	53.374	Xiphophorus_maculatus