EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000020485 (Gene tree)
Gene ID
-
Gene Symbol
ppfibp1b
Alias
si:dkey-103i16.1
Full Name
PTPRF interacting protein%2C binding protein 1b (liprin beta 1)
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
18652 bases
Position
chrKQ557212.1:14064777-14083428
Accession
ZDB-GENE-060503-47
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000027428XendoUPF09412.101.5e-10111
ENSXCOP00000027429XendoUPF09412.101.6e-10111
ENSXCOP00000027430XendoUPF09412.101.9e-10111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000027768-2472-ENSXCOP00000027435823 (aa)--
ENSXCOT00000027769-969-ENSXCOP00000027436322 (aa)--
ENSXCOT00000027762-891-ENSXCOP00000027429296 (aa)--
ENSXCOT00000027763-945-ENSXCOP00000027430314 (aa)--
ENSXCOT00000027761-882-ENSXCOP00000027428293 (aa)--
ENSXCOT00000027766-2817-ENSXCOP00000027433938 (aa)--
ENSXCOT00000027767-2691-ENSXCOP00000027434896 (aa)--
Gene Model
Click here to download ENSXCOG00000020485's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020485's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000020485ppfibp1b9660.638ENSXCOG00000019330si:dkey-222f8.39760.638
ENSXCOG00000020485ppfibp1b5038.065ENSXCOG00000019647endou8038.065
ENSXCOG00000020485ppfibp1b9449.819ENSXCOG00000006362endou29649.819
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000020485ppfibp1b9983.737ENSMMOG00000017067ppfibp1b9784.043Mola_mola
ENSXCOG00000020485ppfibp1b9985.467ENSNBRG00000003489ppfibp1b10085.911Neolamprologus_brichardi
ENSXCOG00000020485ppfibp1b9994.178ENSPFOG00000016359ppfibp1b9493.919Poecilia_formosa

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