EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000020580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5093 bases
Position: chrKQ557217.1:11801136-11806228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027576	RnaseA	PF00074.20	2.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027910	-	483	-	ENSXCOP00000027576	160 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000020580	-	73	45.455	ENSXCOG00000003090	-	93	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020580	-	76	39.516	ENSACIG00000021992	-	94	39.516	Amphilophus_citrinellus
ENSXCOG00000020580	-	73	53.846	ENSACIG00000005830	-	78	53.846	Amphilophus_citrinellus
ENSXCOG00000020580	-	73	44.538	ENSACIG00000000515	-	76	44.538	Amphilophus_citrinellus
ENSXCOG00000020580	-	73	46.667	ENSATEG00000003017	-	93	42.177	Anabas_testudineus
ENSXCOG00000020580	-	72	39.655	ENSATEG00000003020	-	86	39.655	Anabas_testudineus
ENSXCOG00000020580	-	83	31.387	ENSACAG00000005623	-	94	30.921	Anolis_carolinensis
ENSXCOG00000020580	-	83	31.618	ENSACAG00000005620	-	94	31.126	Anolis_carolinensis
ENSXCOG00000020580	-	79	32.558	ENSACAG00000007898	-	99	31.210	Anolis_carolinensis
ENSXCOG00000020580	-	70	34.483	ENSACAG00000021050	-	79	34.483	Anolis_carolinensis
ENSXCOG00000020580	-	89	34.228	ENSACAG00000005615	-	94	34.228	Anolis_carolinensis
ENSXCOG00000020580	-	69	34.783	ENSACAG00000025388	-	77	34.783	Anolis_carolinensis
ENSXCOG00000020580	-	91	41.497	ENSACLG00000009967	-	90	41.497	Astatotilapia_calliptera
ENSXCOG00000020580	-	72	40.000	ENSACLG00000008780	-	88	40.000	Astatotilapia_calliptera
ENSXCOG00000020580	-	92	41.611	ENSACLG00000011381	-	87	41.611	Astatotilapia_calliptera
ENSXCOG00000020580	-	73	56.410	ENSACLG00000019232	-	66	56.410	Astatotilapia_calliptera
ENSXCOG00000020580	-	91	42.177	ENSACLG00000015252	-	90	42.177	Astatotilapia_calliptera
ENSXCOG00000020580	-	96	47.097	ENSACLG00000027154	-	85	47.097	Astatotilapia_calliptera
ENSXCOG00000020580	-	92	42.282	ENSACLG00000011398	-	88	42.282	Astatotilapia_calliptera
ENSXCOG00000020580	-	74	39.167	ENSAMXG00000043058	rnasel3	95	35.948	Astyanax_mexicanus
ENSXCOG00000020580	-	69	30.435	ENSCJAG00000045336	RNASE4	72	30.435	Callithrix_jacchus
ENSXCOG00000020580	-	69	31.304	ENSCHIG00000010582	RNASE4	69	31.304	Capra_hircus
ENSXCOG00000020580	-	74	32.520	ENSCPBG00000009524	-	55	30.405	Chrysemys_picta_bellii
ENSXCOG00000020580	-	71	35.294	ENSCPBG00000009542	-	59	35.294	Chrysemys_picta_bellii
ENSXCOG00000020580	-	74	30.894	ENSCPBG00000009545	-	90	30.894	Chrysemys_picta_bellii
ENSXCOG00000020580	-	71	33.333	ENSCPBG00000009535	-	88	33.333	Chrysemys_picta_bellii
ENSXCOG00000020580	-	75	30.400	ENSCPBG00000009531	-	98	30.400	Chrysemys_picta_bellii
ENSXCOG00000020580	-	68	35.345	ENSCPBG00000018786	-	93	35.345	Chrysemys_picta_bellii
ENSXCOG00000020580	-	70	34.188	ENSCPBG00000018790	-	79	34.188	Chrysemys_picta_bellii
ENSXCOG00000020580	-	66	41.284	ENSCVAG00000007107	-	90	41.284	Cyprinodon_variegatus
ENSXCOG00000020580	-	71	42.105	ENSDARG00000043196	rnasel2	75	42.105	Danio_rerio
ENSXCOG00000020580	-	89	36.054	ENSDARG00000036171	rnasel3	93	36.054	Danio_rerio
ENSXCOG00000020580	-	69	30.435	ENSDNOG00000043364	RNASE4	74	30.435	Dasypus_novemcinctus
ENSXCOG00000020580	-	69	30.435	ENSDORG00000023547	Rnase4	76	30.435	Dipodomys_ordii
ENSXCOG00000020580	-	69	32.174	ENSEEUG00000015438	RNASE4	79	32.174	Erinaceus_europaeus
ENSXCOG00000020580	-	77	42.063	ENSELUG00000010261	-	81	42.063	Esox_lucius
ENSXCOG00000020580	-	78	39.844	ENSELUG00000001648	-	82	39.844	Esox_lucius
ENSXCOG00000020580	-	69	30.435	ENSFCAG00000044490	RNASE4	78	30.435	Felis_catus
ENSXCOG00000020580	-	71	42.241	ENSFHEG00000010963	-	89	42.241	Fundulus_heteroclitus
ENSXCOG00000020580	-	86	58.394	ENSFHEG00000003359	-	98	58.394	Fundulus_heteroclitus
ENSXCOG00000020580	-	75	66.667	ENSFHEG00000012707	-	94	66.667	Fundulus_heteroclitus
ENSXCOG00000020580	-	87	60.432	ENSFHEG00000018269	-	96	59.091	Fundulus_heteroclitus
ENSXCOG00000020580	-	93	72.483	ENSGAFG00000003097	-	84	72.483	Gambusia_affinis
ENSXCOG00000020580	-	72	40.833	ENSGAFG00000016457	-	89	40.833	Gambusia_affinis
ENSXCOG00000020580	-	73	30.579	ENSGAGG00000006589	-	85	30.579	Gopherus_agassizii
ENSXCOG00000020580	-	71	32.773	ENSGAGG00000000779	-	92	32.773	Gopherus_agassizii
ENSXCOG00000020580	-	71	31.356	ENSGAGG00000009295	-	93	31.356	Gopherus_agassizii
ENSXCOG00000020580	-	71	31.933	ENSGAGG00000005649	-	78	31.933	Gopherus_agassizii
ENSXCOG00000020580	-	70	33.333	ENSGAGG00000005645	-	82	32.432	Gopherus_agassizii
ENSXCOG00000020580	-	74	39.496	ENSHBUG00000023877	-	79	39.496	Haplochromis_burtoni
ENSXCOG00000020580	-	73	46.552	ENSHBUG00000008120	-	77	46.552	Haplochromis_burtoni
ENSXCOG00000020580	-	72	33.333	ENSIPUG00000019837	-	77	33.333	Ictalurus_punctatus
ENSXCOG00000020580	-	72	38.462	ENSIPUG00000019807	-	81	38.462	Ictalurus_punctatus
ENSXCOG00000020580	-	78	39.683	ENSIPUG00000019822	-	84	39.683	Ictalurus_punctatus
ENSXCOG00000020580	-	64	41.121	ENSKMAG00000011093	-	96	41.121	Kryptolebias_marmoratus
ENSXCOG00000020580	-	69	36.937	ENSLBEG00000019613	-	70	36.937	Labrus_bergylta
ENSXCOG00000020580	-	72	37.069	ENSLBEG00000013451	-	60	37.069	Labrus_bergylta
ENSXCOG00000020580	-	70	38.393	ENSLBEG00000008584	-	70	38.393	Labrus_bergylta
ENSXCOG00000020580	-	71	33.333	ENSLOCG00000017306	-	77	33.333	Lepisosteus_oculatus
ENSXCOG00000020580	-	73	37.815	ENSMAMG00000017967	rnasel2	94	37.815	Mastacembelus_armatus
ENSXCOG00000020580	-	71	47.368	ENSMZEG00005028344	-	88	47.368	Maylandia_zebra
ENSXCOG00000020580	-	73	39.316	ENSMZEG00005000725	-	95	39.316	Maylandia_zebra
ENSXCOG00000020580	-	91	46.939	ENSMZEG00005009720	-	97	46.939	Maylandia_zebra
ENSXCOG00000020580	-	92	41.611	ENSMZEG00005024008	-	88	41.611	Maylandia_zebra
ENSXCOG00000020580	-	91	42.857	ENSMZEG00005001740	-	87	42.857	Maylandia_zebra
ENSXCOG00000020580	-	96	41.667	ENSMZEG00005013926	-	93	41.667	Maylandia_zebra
ENSXCOG00000020580	-	91	42.177	ENSMZEG00005022699	-	88	42.177	Maylandia_zebra
ENSXCOG00000020580	-	69	30.435	ENSMAUG00000007701	Rnase4	76	30.435	Mesocricetus_auratus
ENSXCOG00000020580	-	69	38.938	ENSMALG00000008576	-	88	38.938	Monopterus_albus
ENSXCOG00000020580	-	73	41.379	ENSMALG00000016394	-	90	41.379	Monopterus_albus
ENSXCOG00000020580	-	69	31.579	ENSMLUG00000028001	-	93	31.579	Myotis_lucifugus
ENSXCOG00000020580	-	72	40.000	ENSNBRG00000014223	-	90	40.000	Neolamprologus_brichardi
ENSXCOG00000020580	-	93	41.333	ENSONIG00000020681	-	90	41.333	Oreochromis_niloticus
ENSXCOG00000020580	-	72	49.138	ENSONIG00000007322	-	76	49.138	Oreochromis_niloticus
ENSXCOG00000020580	-	93	41.333	ENSONIG00000021000	-	90	41.333	Oreochromis_niloticus
ENSXCOG00000020580	-	72	49.138	ENSONIG00000001936	-	76	49.138	Oreochromis_niloticus
ENSXCOG00000020580	-	72	41.739	ENSONIG00000020948	-	79	41.739	Oreochromis_niloticus
ENSXCOG00000020580	-	96	43.949	ENSONIG00000020947	-	96	43.949	Oreochromis_niloticus
ENSXCOG00000020580	-	73	48.718	ENSONIG00000021223	-	97	42.581	Oreochromis_niloticus
ENSXCOG00000020580	-	73	38.655	ENSORLG00000030644	-	80	38.655	Oryzias_latipes
ENSXCOG00000020580	-	69	38.053	ENSORLG00020006700	-	91	38.053	Oryzias_latipes_hni
ENSXCOG00000020580	-	72	39.316	ENSORLG00015015840	-	78	39.316	Oryzias_latipes_hsok
ENSXCOG00000020580	-	73	48.305	ENSORLG00015011855	-	91	48.305	Oryzias_latipes_hsok
ENSXCOG00000020580	-	73	40.336	ENSOMEG00000012035	-	94	40.336	Oryzias_melastigma
ENSXCOG00000020580	-	71	46.491	ENSOMEG00000007084	-	78	46.491	Oryzias_melastigma
ENSXCOG00000020580	-	69	31.304	ENSOARG00000012938	RNASE4	77	31.304	Ovis_aries
ENSXCOG00000020580	-	69	30.435	ENSPPRG00000020045	RNASE4	78	30.435	Panthera_pardus
ENSXCOG00000020580	-	69	30.435	ENSPTIG00000004123	RNASE4	78	30.435	Panthera_tigris_altaica
ENSXCOG00000020580	-	71	41.026	ENSPKIG00000000336	-	64	41.026	Paramormyrops_kingsleyae
ENSXCOG00000020580	-	75	33.884	ENSPKIG00000010448	-	88	33.884	Paramormyrops_kingsleyae
ENSXCOG00000020580	-	92	33.775	ENSPKIG00000010470	-	88	33.775	Paramormyrops_kingsleyae
ENSXCOG00000020580	-	72	39.496	ENSPKIG00000010485	-	79	39.496	Paramormyrops_kingsleyae
ENSXCOG00000020580	-	89	33.333	ENSPKIG00000000325	-	94	33.333	Paramormyrops_kingsleyae
ENSXCOG00000020580	-	70	35.043	ENSPSIG00000000335	-	80	35.043	Pelodiscus_sinensis
ENSXCOG00000020580	-	70	42.105	ENSPMGG00000008154	-	86	42.105	Periophthalmus_magnuspinnatus
ENSXCOG00000020580	-	72	40.171	ENSPMGG00000005577	-	92	40.171	Periophthalmus_magnuspinnatus
ENSXCOG00000020580	-	72	46.154	ENSPMGG00000005579	-	88	46.154	Periophthalmus_magnuspinnatus
ENSXCOG00000020580	-	71	31.304	ENSPFOG00000024337	-	78	31.304	Poecilia_formosa
ENSXCOG00000020580	-	99	84.177	ENSPFOG00000021872	-	100	84.177	Poecilia_formosa
ENSXCOG00000020580	-	72	41.667	ENSPLAG00000000929	-	89	41.667	Poecilia_latipinna
ENSXCOG00000020580	-	71	31.579	ENSPMEG00000022744	-	79	31.579	Poecilia_mexicana
ENSXCOG00000020580	-	72	41.667	ENSPMEG00000017685	-	89	41.667	Poecilia_mexicana
ENSXCOG00000020580	-	68	39.091	ENSPREG00000014622	-	82	39.091	Poecilia_reticulata
ENSXCOG00000020580	-	72	40.171	ENSPREG00000014632	-	89	40.171	Poecilia_reticulata
ENSXCOG00000020580	-	93	87.919	ENSPREG00000012416	-	99	87.919	Poecilia_reticulata
ENSXCOG00000020580	-	73	39.316	ENSPNYG00000020476	-	95	39.316	Pundamilia_nyererei
ENSXCOG00000020580	-	74	39.496	ENSPNAG00000011049	-	81	39.496	Pygocentrus_nattereri
ENSXCOG00000020580	-	76	40.984	ENSPNAG00000011037	-	83	40.984	Pygocentrus_nattereri
ENSXCOG00000020580	-	69	31.304	ENSSBOG00000033190	RNASE4	72	31.304	Saimiri_boliviensis_boliviensis
ENSXCOG00000020580	-	73	38.983	ENSSFOG00015018033	-	90	38.983	Scleropages_formosus
ENSXCOG00000020580	-	72	39.516	ENSSFOG00015002638	-	87	39.516	Scleropages_formosus
ENSXCOG00000020580	-	74	37.903	ENSSFOG00015001739	rnasel2	95	37.903	Scleropages_formosus
ENSXCOG00000020580	-	72	35.043	ENSSFOG00015008105	-	91	35.043	Scleropages_formosus
ENSXCOG00000020580	-	73	34.454	ENSSFOG00015002590	-	94	34.454	Scleropages_formosus
ENSXCOG00000020580	-	71	39.130	ENSSDUG00000002832	-	92	39.130	Seriola_dumerili
ENSXCOG00000020580	-	72	39.316	ENSSLDG00000024549	-	90	39.316	Seriola_lalandi_dorsalis
ENSXCOG00000020580	-	78	34.884	ENSSPUG00000001251	-	77	34.884	Sphenodon_punctatus
ENSXCOG00000020580	-	71	33.051	ENSSPUG00000001234	-	81	33.051	Sphenodon_punctatus
ENSXCOG00000020580	-	70	35.043	ENSSPUG00000000297	-	78	35.043	Sphenodon_punctatus
ENSXCOG00000020580	-	79	33.846	ENSSPUG00000001265	-	82	33.846	Sphenodon_punctatus
ENSXCOG00000020580	-	69	31.304	ENSTBEG00000012494	RNASE4	77	31.304	Tupaia_belangeri
ENSXCOG00000020580	-	69	30.435	ENSVPAG00000011241	RNASE4	77	30.435	Vicugna_pacos
ENSXCOG00000020580	-	73	45.455	ENSXMAG00000019593	-	93	45.455	Xiphophorus_maculatus