EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000020628 (Gene tree)
Gene ID: -
Gene Symbol: mrpl23
Alias: zgc:86630
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 40562 bases
Position: chrKQ557212.1:16606028-16646589
Accession: ZDB-GENE-040625-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000027648	Ribosomal_L23	PF00276.20	1.7e-07	1	1
ENSXCOP00000027647	Ribosomal_L23	PF00276.20	6.8e-07	1	1
ENSXCOP00000027646	Ribosomal_L23	PF00276.20	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000027982	-	417	-	ENSXCOP00000027647	138 (aa)	-	-
ENSXCOT00000027983	-	393	-	ENSXCOP00000027648	130 (aa)	-	-
ENSXCOT00000027981	-	441	-	ENSXCOP00000027646	146 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000020628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000020628	mrpl23	100	53.896	ENSG00000214026	MRPL23	100	53.896	Homo_sapiens
ENSXCOG00000020628	mrpl23	100	77.124	ENSAPOG00000013198	mrpl23	99	77.124	Acanthochromis_polyacanthus
ENSXCOG00000020628	mrpl23	98	56.291	ENSAMEG00000002153	-	97	56.291	Ailuropoda_melanoleuca
ENSXCOG00000020628	mrpl23	97	79.054	ENSACIG00000024327	mrpl23	96	79.054	Amphilophus_citrinellus
ENSXCOG00000020628	mrpl23	100	77.124	ENSAOCG00000013679	mrpl23	99	77.124	Amphiprion_ocellaris
ENSXCOG00000020628	mrpl23	100	77.124	ENSAPEG00000010298	mrpl23	99	77.124	Amphiprion_percula
ENSXCOG00000020628	mrpl23	100	75.817	ENSATEG00000019314	mrpl23	99	75.817	Anabas_testudineus
ENSXCOG00000020628	mrpl23	68	50.467	ENSAPLG00000012955	-	92	50.467	Anas_platyrhynchos
ENSXCOG00000020628	mrpl23	53	68.116	ENSACAG00000009700	-	82	62.025	Anolis_carolinensis
ENSXCOG00000020628	mrpl23	100	53.595	ENSANAG00000010507	-	100	53.595	Aotus_nancymaae
ENSXCOG00000020628	mrpl23	100	78.431	ENSACLG00000002565	mrpl23	99	78.431	Astatotilapia_calliptera
ENSXCOG00000020628	mrpl23	75	65.306	ENSAMXG00000016759	mrpl23	91	65.306	Astyanax_mexicanus
ENSXCOG00000020628	mrpl23	83	41.538	ENSBTAG00000000103	MRPL23	100	45.794	Bos_taurus
ENSXCOG00000020628	mrpl23	71	30.508	WBGene00020348	mrpl-23	74	30.508	Caenorhabditis_elegans
ENSXCOG00000020628	mrpl23	97	54.730	ENSCAFG00000010086	-	96	55.102	Canis_familiaris
ENSXCOG00000020628	mrpl23	97	54.730	ENSCAFG00020017439	-	96	55.102	Canis_lupus_dingo
ENSXCOG00000020628	mrpl23	97	53.378	ENSCHIG00000019224	-	96	53.378	Capra_hircus
ENSXCOG00000020628	mrpl23	100	56.209	ENSTSYG00000030664	-	100	56.209	Carlito_syrichta
ENSXCOG00000020628	mrpl23	96	57.895	ENSCAPG00000012400	-	100	57.895	Cavia_aperea
ENSXCOG00000020628	mrpl23	97	56.081	ENSCPOG00000035162	-	96	56.081	Cavia_porcellus
ENSXCOG00000020628	mrpl23	97	54.054	ENSCCAG00000021662	-	96	54.054	Cebus_capucinus
ENSXCOG00000020628	mrpl23	97	55.705	ENSCATG00000037780	-	95	55.705	Cercocebus_atys
ENSXCOG00000020628	mrpl23	94	55.556	ENSCATG00000019817	-	88	55.556	Cercocebus_atys
ENSXCOG00000020628	mrpl23	97	55.405	ENSCLAG00000015446	-	96	55.782	Chinchilla_lanigera
ENSXCOG00000020628	mrpl23	99	52.941	ENSCSAG00000019043	-	99	52.941	Chlorocebus_sabaeus
ENSXCOG00000020628	mrpl23	100	54.545	ENSCSAG00000009837	-	100	54.545	Chlorocebus_sabaeus
ENSXCOG00000020628	mrpl23	99	63.816	ENSCPBG00000007389	-	98	63.816	Chrysemys_picta_bellii
ENSXCOG00000020628	mrpl23	52	53.731	ENSCING00000002791	-	77	36.765	Ciona_intestinalis
ENSXCOG00000020628	mrpl23	97	54.730	ENSCANG00000032318	-	100	54.730	Colobus_angolensis_palliatus
ENSXCOG00000020628	mrpl23	97	54.054	ENSCGRG00001000462	Mrpl23	96	54.422	Cricetulus_griseus_chok1gshd
ENSXCOG00000020628	mrpl23	97	54.054	ENSCGRG00000002207	Mrpl23	96	54.422	Cricetulus_griseus_crigri
ENSXCOG00000020628	mrpl23	100	71.895	ENSCSEG00000008738	mrpl23	99	73.649	Cynoglossus_semilaevis
ENSXCOG00000020628	mrpl23	100	79.085	ENSCVAG00000002822	mrpl23	99	79.085	Cyprinodon_variegatus
ENSXCOG00000020628	mrpl23	99	71.523	ENSDARG00000045696	mrpl23	98	71.523	Danio_rerio
ENSXCOG00000020628	mrpl23	98	48.993	ENSDNOG00000047306	-	97	48.993	Dasypus_novemcinctus
ENSXCOG00000020628	mrpl23	98	53.642	ENSDORG00000027504	Mrpl23	100	52.778	Dipodomys_ordii
ENSXCOG00000020628	mrpl23	100	41.026	FBgn0035335	mRpL23	100	41.026	Drosophila_melanogaster
ENSXCOG00000020628	mrpl23	98	56.863	ENSEASG00005000456	-	54	57.616	Equus_asinus_asinus
ENSXCOG00000020628	mrpl23	97	57.616	ENSECAG00000024486	-	51	57.616	Equus_caballus
ENSXCOG00000020628	mrpl23	99	71.711	ENSELUG00000022256	RM23	99	71.711	Esox_lucius
ENSXCOG00000020628	mrpl23	97	55.705	ENSFCAG00000018795	-	96	56.081	Felis_catus
ENSXCOG00000020628	mrpl23	95	56.849	ENSFALG00000011598	-	95	57.432	Ficedula_albicollis
ENSXCOG00000020628	mrpl23	97	56.757	ENSFDAG00000013606	-	96	56.757	Fukomys_damarensis
ENSXCOG00000020628	mrpl23	100	79.085	ENSFHEG00000010978	mrpl23	94	80.000	Fundulus_heteroclitus
ENSXCOG00000020628	mrpl23	95	69.178	ENSGMOG00000004509	mrpl23	100	69.178	Gadus_morhua
ENSXCOG00000020628	mrpl23	97	58.108	ENSGALG00000006561	-	68	58.108	Gallus_gallus
ENSXCOG00000020628	mrpl23	100	84.314	ENSGAFG00000021827	mrpl23	99	84.314	Gambusia_affinis
ENSXCOG00000020628	mrpl23	100	78.289	ENSGACG00000011130	mrpl23	99	78.289	Gasterosteus_aculeatus
ENSXCOG00000020628	mrpl23	99	63.816	ENSGAGG00000023827	-	98	63.816	Gopherus_agassizii
ENSXCOG00000020628	mrpl23	97	55.405	ENSGGOG00000000333	-	83	55.405	Gorilla_gorilla
ENSXCOG00000020628	mrpl23	100	79.739	ENSHBUG00000023397	mrpl23	99	79.739	Haplochromis_burtoni
ENSXCOG00000020628	mrpl23	97	56.081	ENSHGLG00000016722	-	96	56.463	Heterocephalus_glaber_female
ENSXCOG00000020628	mrpl23	99	56.000	ENSHGLG00100003075	-	96	56.463	Heterocephalus_glaber_male
ENSXCOG00000020628	mrpl23	100	73.856	ENSHCOG00000009092	mrpl23	99	73.856	Hippocampus_comes
ENSXCOG00000020628	mrpl23	99	69.536	ENSIPUG00000005383	mrpl23	98	69.536	Ictalurus_punctatus
ENSXCOG00000020628	mrpl23	97	52.703	ENSSTOG00000024573	-	96	52.703	Ictidomys_tridecemlineatus
ENSXCOG00000020628	mrpl23	97	52.703	ENSJJAG00000003519	Mrpl23	96	52.703	Jaculus_jaculus
ENSXCOG00000020628	mrpl23	99	76.974	ENSKMAG00000001599	mrpl23	99	75.817	Kryptolebias_marmoratus
ENSXCOG00000020628	mrpl23	100	76.471	ENSLBEG00000002580	mrpl23	99	76.471	Labrus_bergylta
ENSXCOG00000020628	mrpl23	99	65.563	ENSLACG00000011528	mrpl23	98	65.563	Latimeria_chalumnae
ENSXCOG00000020628	mrpl23	99	71.523	ENSLOCG00000001825	mrpl23	98	71.523	Lepisosteus_oculatus
ENSXCOG00000020628	mrpl23	70	49.541	ENSMFAG00000039715	-	100	49.541	Macaca_fascicularis
ENSXCOG00000020628	mrpl23	100	54.545	ENSMFAG00000034529	-	100	54.545	Macaca_fascicularis
ENSXCOG00000020628	mrpl23	97	55.405	ENSMMUG00000031268	MRPL23	96	55.405	Macaca_mulatta
ENSXCOG00000020628	mrpl23	100	53.896	ENSMNEG00000036690	-	100	53.896	Macaca_nemestrina
ENSXCOG00000020628	mrpl23	70	50.459	ENSMNEG00000033446	-	100	50.459	Macaca_nemestrina
ENSXCOG00000020628	mrpl23	97	54.730	ENSMLEG00000015767	-	100	54.730	Mandrillus_leucophaeus
ENSXCOG00000020628	mrpl23	100	78.431	ENSMAMG00000003609	mrpl23	99	78.431	Mastacembelus_armatus
ENSXCOG00000020628	mrpl23	100	78.431	ENSMZEG00005017456	mrpl23	99	78.431	Maylandia_zebra
ENSXCOG00000020628	mrpl23	99	54.967	ENSMGAG00000007978	-	99	54.967	Meleagris_gallopavo
ENSXCOG00000020628	mrpl23	97	53.378	ENSMAUG00000018693	Mrpl23	100	53.741	Mesocricetus_auratus
ENSXCOG00000020628	mrpl23	97	62.838	ENSMICG00000042091	-	94	62.838	Microcebus_murinus
ENSXCOG00000020628	mrpl23	97	54.054	ENSMOCG00000018436	Mrpl23	96	54.054	Microtus_ochrogaster
ENSXCOG00000020628	mrpl23	98	75.333	ENSMMOG00000018097	mrpl23	96	75.333	Mola_mola
ENSXCOG00000020628	mrpl23	99	58.667	ENSMODG00000003437	-	98	58.667	Monodelphis_domestica
ENSXCOG00000020628	mrpl23	100	73.856	ENSMALG00000014571	mrpl23	99	75.000	Monopterus_albus
ENSXCOG00000020628	mrpl23	97	54.054	MGP_CAROLIEiJ_G0030727	Mrpl23	96	54.054	Mus_caroli
ENSXCOG00000020628	mrpl23	98	52.667	ENSMUSG00000037772	Mrpl23	96	53.378	Mus_musculus
ENSXCOG00000020628	mrpl23	97	52.027	MGP_PahariEiJ_G0013923	Mrpl23	96	52.027	Mus_pahari
ENSXCOG00000020628	mrpl23	97	54.054	MGP_SPRETEiJ_G0031836	Mrpl23	96	54.054	Mus_spretus
ENSXCOG00000020628	mrpl23	97	55.629	ENSMPUG00000005658	-	96	56.291	Mustela_putorius_furo
ENSXCOG00000020628	mrpl23	97	50.336	ENSMPUG00000002923	-	95	50.336	Mustela_putorius_furo
ENSXCOG00000020628	mrpl23	99	51.656	ENSNGAG00000023444	-	100	52.703	Nannospalax_galili
ENSXCOG00000020628	mrpl23	75	56.034	ENSNGAG00000012877	-	84	56.034	Nannospalax_galili
ENSXCOG00000020628	mrpl23	100	79.085	ENSNBRG00000007183	mrpl23	99	79.085	Neolamprologus_brichardi
ENSXCOG00000020628	mrpl23	100	53.896	ENSNLEG00000026950	-	100	53.896	Nomascus_leucogenys
ENSXCOG00000020628	mrpl23	53	66.667	ENSOPRG00000018353	-	52	66.197	Ochotona_princeps
ENSXCOG00000020628	mrpl23	98	53.333	ENSODEG00000017262	-	97	53.333	Octodon_degus
ENSXCOG00000020628	mrpl23	96	44.898	ENSODEG00000012131	-	95	44.898	Octodon_degus
ENSXCOG00000020628	mrpl23	98	80.000	ENSONIG00000014500	mrpl23	94	80.000	Oreochromis_niloticus
ENSXCOG00000020628	mrpl23	100	77.778	ENSORLG00000025383	mrpl23	95	79.592	Oryzias_latipes
ENSXCOG00000020628	mrpl23	100	77.124	ENSORLG00020008379	mrpl23	99	77.124	Oryzias_latipes_hni
ENSXCOG00000020628	mrpl23	99	78.947	ENSOMEG00000019132	mrpl23	78	78.947	Oryzias_melastigma
ENSXCOG00000020628	mrpl23	97	56.757	ENSOGAG00000029988	-	96	56.757	Otolemur_garnettii
ENSXCOG00000020628	mrpl23	92	51.773	ENSOARG00000000706	-	88	51.773	Ovis_aries
ENSXCOG00000020628	mrpl23	100	54.545	ENSPPAG00000034414	-	100	54.545	Pan_paniscus
ENSXCOG00000020628	mrpl23	99	55.263	ENSPPRG00000013232	-	99	55.263	Panthera_pardus
ENSXCOG00000020628	mrpl23	100	54.545	ENSPTRG00000033746	MRPL23	100	54.545	Pan_troglodytes
ENSXCOG00000020628	mrpl23	100	54.545	ENSPANG00000018813	-	100	54.545	Papio_anubis
ENSXCOG00000020628	mrpl23	99	70.199	ENSPKIG00000001102	mrpl23	98	70.199	Paramormyrops_kingsleyae
ENSXCOG00000020628	mrpl23	84	62.016	ENSPSIG00000012834	-	100	62.016	Pelodiscus_sinensis
ENSXCOG00000020628	mrpl23	93	68.531	ENSPMGG00000006407	mrpl23	96	68.531	Periophthalmus_magnuspinnatus
ENSXCOG00000020628	mrpl23	97	52.027	ENSPEMG00000018572	Mrpl23	96	53.378	Peromyscus_maniculatus_bairdii
ENSXCOG00000020628	mrpl23	99	53.947	ENSPMAG00000005259	mrpl23	98	53.947	Petromyzon_marinus
ENSXCOG00000020628	mrpl23	56	71.233	ENSPCIG00000027047	-	50	65.000	Phascolarctos_cinereus
ENSXCOG00000020628	mrpl23	100	79.739	ENSPFOG00000014159	mrpl23	99	79.739	Poecilia_formosa
ENSXCOG00000020628	mrpl23	100	79.739	ENSPLAG00000023456	mrpl23	99	79.739	Poecilia_latipinna
ENSXCOG00000020628	mrpl23	100	80.392	ENSPMEG00000012252	mrpl23	99	80.392	Poecilia_mexicana
ENSXCOG00000020628	mrpl23	100	81.699	ENSPREG00000019951	mrpl23	98	81.699	Poecilia_reticulata
ENSXCOG00000020628	mrpl23	100	53.896	ENSPPYG00000002918	-	100	53.896	Pongo_abelii
ENSXCOG00000020628	mrpl23	97	60.135	ENSPCOG00000026555	-	100	60.135	Propithecus_coquereli
ENSXCOG00000020628	mrpl23	54	67.143	ENSPVAG00000000331	-	52	61.250	Pteropus_vampyrus
ENSXCOG00000020628	mrpl23	100	79.085	ENSPNYG00000015541	mrpl23	99	79.085	Pundamilia_nyererei
ENSXCOG00000020628	mrpl23	99	69.079	ENSPNAG00000010548	mrpl23	99	69.079	Pygocentrus_nattereri
ENSXCOG00000020628	mrpl23	97	53.378	ENSRNOG00000020354	Mrpl23	96	53.378	Rattus_norvegicus
ENSXCOG00000020628	mrpl23	100	54.545	ENSRBIG00000041638	-	100	54.545	Rhinopithecus_bieti
ENSXCOG00000020628	mrpl23	97	55.405	ENSRROG00000004661	-	100	55.405	Rhinopithecus_roxellana
ENSXCOG00000020628	mrpl23	97	55.705	ENSSBOG00000025338	-	81	55.705	Saimiri_boliviensis_boliviensis
ENSXCOG00000020628	mrpl23	97	58.784	ENSSHAG00000002716	-	100	58.784	Sarcophilus_harrisii
ENSXCOG00000020628	mrpl23	99	68.212	ENSSFOG00015002519	mrpl23	98	68.212	Scleropages_formosus
ENSXCOG00000020628	mrpl23	100	77.778	ENSSMAG00000009264	mrpl23	99	77.778	Scophthalmus_maximus
ENSXCOG00000020628	mrpl23	100	79.739	ENSSDUG00000019634	mrpl23	99	81.081	Seriola_dumerili
ENSXCOG00000020628	mrpl23	100	79.739	ENSSLDG00000012055	mrpl23	99	79.739	Seriola_lalandi_dorsalis
ENSXCOG00000020628	mrpl23	99	59.211	ENSSPUG00000002656	-	99	59.211	Sphenodon_punctatus
ENSXCOG00000020628	mrpl23	97	81.208	ENSSPAG00000001601	mrpl23	100	81.208	Stegastes_partitus
ENSXCOG00000020628	mrpl23	97	54.362	ENSSSCG00000038364	-	96	54.362	Sus_scrofa
ENSXCOG00000020628	mrpl23	97	54.730	ENSTGUG00000009338	MRPL23	100	54.730	Taeniopygia_guttata
ENSXCOG00000020628	mrpl23	100	73.203	ENSTRUG00000009637	mrpl23	99	73.203	Takifugu_rubripes
ENSXCOG00000020628	mrpl23	53	86.957	ENSTNIG00000010463	mrpl23	84	79.747	Tetraodon_nigroviridis
ENSXCOG00000020628	mrpl23	97	56.667	ENSUAMG00000020867	-	97	56.667	Ursus_americanus
ENSXCOG00000020628	mrpl23	97	56.667	ENSUMAG00000006227	-	82	57.047	Ursus_maritimus
ENSXCOG00000020628	mrpl23	98	53.691	ENSVVUG00000002581	-	75	54.422	Vulpes_vulpes
ENSXCOG00000020628	mrpl23	99	61.589	ENSXETG00000014017	mrpl23	98	61.589	Xenopus_tropicalis
ENSXCOG00000020628	mrpl23	100	83.660	ENSXMAG00000015496	mrpl23	99	83.660	Xiphophorus_maculatus