EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXCOG00000020795 (Gene tree)
Gene ID
-
Gene Symbol
hbp1
Alias
wu:fj62c10|zgc:112297
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
8120 bases
Position
chrKQ557212.1:19537135-19545254
Accession
ZDB-GENE-050522-414
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000027881AXHPF08517.124.3e-3411
ENSXCOP00000027883AXHPF08517.121.6e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000028217-1425-ENSXCOP00000027881474 (aa)--
ENSXCOT00000028219-1476-ENSXCOP00000027883491 (aa)--
Gene Model
Click here to download ENSXCOG00000020795's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000020795's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000020795hbp19162.268ENSG00000105856HBP19771.812Homo_sapiens
ENSXCOG00000020795hbp19194.170ENSAPOG00000015816hbp19994.170Acanthochromis_polyacanthus
ENSXCOG00000020795hbp19162.603ENSAMEG00000013492HBP19361.570Ailuropoda_melanoleuca
ENSXCOG00000020795hbp19160.491ENSACIG00000019093-9357.725Amphilophus_citrinellus
ENSXCOG00000020795hbp19490.129ENSACIG00000018873hbp19690.129Amphilophus_citrinellus
ENSXCOG00000020795hbp19262.025ENSAOCG00000001429-9260.759Amphiprion_ocellaris
ENSXCOG00000020795hbp19193.498ENSAOCG00000010889hbp19993.498Amphiprion_ocellaris
ENSXCOG00000020795hbp19261.441ENSAPEG00000022589-9260.381Amphiprion_percula
ENSXCOG00000020795hbp19193.498ENSAPEG00000002330hbp19993.498Amphiprion_percula
ENSXCOG00000020795hbp19161.884ENSATEG00000003902-9759.574Anabas_testudineus
ENSXCOG00000020795hbp19193.289ENSATEG00000016411hbp19993.289Anabas_testudineus
ENSXCOG00000020795hbp19262.319ENSAPLG00000007110HBP19463.136Anas_platyrhynchos
ENSXCOG00000020795hbp19260.412ENSACAG00000015023HBP19460.606Anolis_carolinensis
ENSXCOG00000020795hbp19161.856ENSANAG00000022302HBP19173.171Aotus_nancymaae
ENSXCOG00000020795hbp19162.473ENSACLG00000003606HBP19160.738Astatotilapia_calliptera
ENSXCOG00000020795hbp19392.358ENSACLG00000004758hbp19593.960Astatotilapia_calliptera
ENSXCOG00000020795hbp19175.162ENSAMXG00000017678hbp19674.021Astyanax_mexicanus
ENSXCOG00000020795hbp19162.112ENSBTAG00000005524HBP19261.491Bos_taurus
ENSXCOG00000020795hbp19162.062ENSCJAG00000016260HBP19173.171Callithrix_jacchus
ENSXCOG00000020795hbp19163.147ENSCAFG00000003939HBP19261.905Canis_familiaris
ENSXCOG00000020795hbp19163.147ENSCAFG00020023119HBP19261.905Canis_lupus_dingo
ENSXCOG00000020795hbp19162.112ENSCHIG00000024405HBP19461.491Capra_hircus
ENSXCOG00000020795hbp19161.728ENSTSYG00000010057HBP19461.317Carlito_syrichta
ENSXCOG00000020795hbp19162.603ENSCAPG00000017460HBP19361.570Cavia_aperea
ENSXCOG00000020795hbp19162.603ENSCPOG00000002375HBP19261.570Cavia_porcellus
ENSXCOG00000020795hbp19161.856ENSCCAG00000026359HBP19173.171Cebus_capucinus
ENSXCOG00000020795hbp19162.062ENSCATG00000021910HBP19461.443Cercocebus_atys
ENSXCOG00000020795hbp19261.715ENSCLAG00000005170HBP19461.475Chinchilla_lanigera
ENSXCOG00000020795hbp19261.297ENSCSAG00000011395HBP19361.270Chlorocebus_sabaeus
ENSXCOG00000020795hbp16195.745ENSCHOG00000006820HBP16395.745Choloepus_hoffmanni
ENSXCOG00000020795hbp19263.958ENSCPBG00000000954HBP19263.265Chrysemys_picta_bellii
ENSXCOG00000020795hbp19162.062ENSCANG00000022804HBP19461.443Colobus_angolensis_palliatus
ENSXCOG00000020795hbp19161.523ENSCGRG00001014437Hbp19260.494Cricetulus_griseus_chok1gshd
ENSXCOG00000020795hbp19161.523ENSCGRG00000013859Hbp19260.494Cricetulus_griseus_crigri
ENSXCOG00000020795hbp19188.814ENSCSEG00000003373hbp19988.814Cynoglossus_semilaevis
ENSXCOG00000020795hbp19161.758ENSCVAG00000008501-9260.000Cyprinodon_variegatus
ENSXCOG00000020795hbp19196.637ENSCVAG00000008930hbp19996.637Cyprinodon_variegatus
ENSXCOG00000020795hbp19774.180ENSDARG00000028517hbp19974.795Danio_rerio
ENSXCOG00000020795hbp19162.268ENSDNOG00000004405HBP18961.649Dasypus_novemcinctus
ENSXCOG00000020795hbp16356.024ENSDORG00000010576Hbp19055.120Dipodomys_ordii
ENSXCOG00000020795hbp19155.063ENSETEG00000018542HBP19454.004Echinops_telfairi
ENSXCOG00000020795hbp19143.408ENSEBUG00000016475hbp18444.351Eptatretus_burgeri
ENSXCOG00000020795hbp19162.346ENSEASG00005017469HBP18561.364Equus_asinus_asinus
ENSXCOG00000020795hbp19161.983ENSECAG00000020969HBP19361.570Equus_caballus
ENSXCOG00000020795hbp19180.440ENSELUG00000006967hbp19877.093Esox_lucius
ENSXCOG00000020795hbp19762.897ENSELUG00000017031-9261.034Esox_lucius
ENSXCOG00000020795hbp19162.190ENSFCAG00000005858HBP18661.777Felis_catus
ENSXCOG00000020795hbp19163.544ENSFALG00000010259HBP19262.118Ficedula_albicollis
ENSXCOG00000020795hbp19161.649ENSFDAG00000007897HBP19261.237Fukomys_damarensis
ENSXCOG00000020795hbp19161.874ENSFHEG00000014389-9161.656Fundulus_heteroclitus
ENSXCOG00000020795hbp19196.637ENSFHEG00000008222hbp19996.637Fundulus_heteroclitus
ENSXCOG00000020795hbp19183.893ENSGMOG00000013782hbp19983.893Gadus_morhua
ENSXCOG00000020795hbp19262.994ENSGALG00000008050HBP19262.933Gallus_gallus
ENSXCOG00000020795hbp19163.717ENSGAFG00000004651-9163.717Gambusia_affinis
ENSXCOG00000020795hbp19199.776ENSGAFG00000021976hbp19999.776Gambusia_affinis
ENSXCOG00000020795hbp19458.315ENSGACG00000019192-9459.607Gasterosteus_aculeatus
ENSXCOG00000020795hbp19185.588ENSGACG00000010054hbp19985.588Gasterosteus_aculeatus
ENSXCOG00000020795hbp19263.883ENSGAGG00000023042HBP19263.673Gopherus_agassizii
ENSXCOG00000020795hbp19162.062ENSGGOG00000007788HBP19073.251Gorilla_gorilla
ENSXCOG00000020795hbp19162.232ENSHBUG00000016198-9160.515Haplochromis_burtoni
ENSXCOG00000020795hbp19392.140ENSHBUG00000004967hbp19692.952Haplochromis_burtoni
ENSXCOG00000020795hbp19161.237ENSHGLG00000019188HBP19261.237Heterocephalus_glaber_female
ENSXCOG00000020795hbp19544.948ENSHGLG00100014672-9644.928Heterocephalus_glaber_male
ENSXCOG00000020795hbp19161.237ENSHGLG00100001912HBP19261.237Heterocephalus_glaber_male
ENSXCOG00000020795hbp19184.340ENSHCOG00000011877hbp19982.998Hippocampus_comes
ENSXCOG00000020795hbp19554.043ENSHCOG00000010740-9354.661Hippocampus_comes
ENSXCOG00000020795hbp19473.362ENSIPUG00000023044hbp19275.647Ictalurus_punctatus
ENSXCOG00000020795hbp19162.062ENSSTOG00000013846HBP19261.443Ictidomys_tridecemlineatus
ENSXCOG00000020795hbp19161.728ENSJJAG00000015341Hbp19261.111Jaculus_jaculus
ENSXCOG00000020795hbp19194.395ENSKMAG00000003132hbp19994.395Kryptolebias_marmoratus
ENSXCOG00000020795hbp19658.458ENSKMAG00000000266-9858.071Kryptolebias_marmoratus
ENSXCOG00000020795hbp19191.051ENSLBEG00000012078hbp19991.051Labrus_bergylta
ENSXCOG00000020795hbp19557.054ENSLBEG00000023959-9756.846Labrus_bergylta
ENSXCOG00000020795hbp19163.860ENSLACG00000009119HBP19262.805Latimeria_chalumnae
ENSXCOG00000020795hbp19173.237ENSLOCG00000015822hbp19273.029Lepisosteus_oculatus
ENSXCOG00000020795hbp19160.700ENSLAFG00000005317HBP19460.288Loxodonta_africana
ENSXCOG00000020795hbp19162.062ENSMFAG00000030375HBP19173.251Macaca_fascicularis
ENSXCOG00000020795hbp19161.934ENSMMUG00000015409HBP18970.698Macaca_mulatta
ENSXCOG00000020795hbp19159.579ENSMNEG00000037516HBP19359.368Macaca_nemestrina
ENSXCOG00000020795hbp19162.062ENSMLEG00000031993HBP19461.443Mandrillus_leucophaeus
ENSXCOG00000020795hbp19192.394ENSMAMG00000023227hbp19992.394Mastacembelus_armatus
ENSXCOG00000020795hbp19261.555ENSMAMG00000023588-9260.294Mastacembelus_armatus
ENSXCOG00000020795hbp19162.473ENSMZEG00005015065HBP19160.738Maylandia_zebra
ENSXCOG00000020795hbp19193.750ENSMZEG00005005999hbp17993.750Maylandia_zebra
ENSXCOG00000020795hbp19262.994ENSMGAG00000006880HBP19362.525Meleagris_gallopavo
ENSXCOG00000020795hbp19160.700ENSMAUG00000011449Hbp19260.288Mesocricetus_auratus
ENSXCOG00000020795hbp19162.268ENSMICG00000012858HBP19273.251Microcebus_murinus
ENSXCOG00000020795hbp19161.728ENSMOCG00000019227Hbp19360.612Microtus_ochrogaster
ENSXCOG00000020795hbp19288.610ENSMMOG00000012207hbp19686.928Mola_mola
ENSXCOG00000020795hbp19160.954ENSMMOG00000010239-9859.307Mola_mola
ENSXCOG00000020795hbp19162.705ENSMODG00000016376HBP18361.602Monodelphis_domestica
ENSXCOG00000020795hbp19191.723ENSMALG00000009884hbp19991.723Monopterus_albus
ENSXCOG00000020795hbp19754.851ENSMALG00000010834-9556.875Monopterus_albus
ENSXCOG00000020795hbp19161.396MGP_CAROLIEiJ_G0017683Hbp17978.030Mus_caroli
ENSXCOG00000020795hbp19161.396ENSMUSG00000002996Hbp17978.030Mus_musculus
ENSXCOG00000020795hbp19161.317MGP_PahariEiJ_G0029441Hbp17978.626Mus_pahari
ENSXCOG00000020795hbp19161.396MGP_SPRETEiJ_G0018525Hbp17978.030Mus_spretus
ENSXCOG00000020795hbp19163.017ENSMPUG00000018249HBP19261.983Mustela_putorius_furo
ENSXCOG00000020795hbp19161.777ENSMLUG00000012425HBP19261.364Myotis_lucifugus
ENSXCOG00000020795hbp19161.649ENSNGAG00000023485Hbp19261.031Nannospalax_galili
ENSXCOG00000020795hbp19162.446ENSNBRG00000017820-9160.730Neolamprologus_brichardi
ENSXCOG00000020795hbp19391.921ENSNBRG00000001405hbp19692.731Neolamprologus_brichardi
ENSXCOG00000020795hbp19162.268ENSNLEG00000008761HBP19073.251Nomascus_leucogenys
ENSXCOG00000020795hbp18257.701ENSMEUG00000011116HBP18456.849Notamacropus_eugenii
ENSXCOG00000020795hbp16195.745ENSOPRG00000005315HBP16495.745Ochotona_princeps
ENSXCOG00000020795hbp19153.587ENSODEG00000000482-9452.061Octodon_degus
ENSXCOG00000020795hbp19161.856ENSODEG00000001327-9261.443Octodon_degus
ENSXCOG00000020795hbp19345.188ENSODEG00000010517-9544.770Octodon_degus
ENSXCOG00000020795hbp19259.305ENSONIG00000011868-9759.877Oreochromis_niloticus
ENSXCOG00000020795hbp19194.395ENSONIG00000008523hbp19994.395Oreochromis_niloticus
ENSXCOG00000020795hbp19162.526ENSOANG00000003174HBP19460.915Ornithorhynchus_anatinus
ENSXCOG00000020795hbp19162.845ENSOCUG00000012758HBP19462.162Oryctolagus_cuniculus
ENSXCOG00000020795hbp19191.704ENSORLG00000004396hbp19991.704Oryzias_latipes
ENSXCOG00000020795hbp19359.158ENSORLG00000009474-9457.415Oryzias_latipes
ENSXCOG00000020795hbp19260.043ENSORLG00020004269-9358.280Oryzias_latipes_hni
ENSXCOG00000020795hbp19191.256ENSORLG00020000370hbp19991.256Oryzias_latipes_hni
ENSXCOG00000020795hbp19191.031ENSORLG00015006557hbp19991.031Oryzias_latipes_hsok
ENSXCOG00000020795hbp19559.915ENSOMEG00000013045-9160.087Oryzias_melastigma
ENSXCOG00000020795hbp19193.049ENSOMEG00000012837hbp19993.049Oryzias_melastigma
ENSXCOG00000020795hbp19162.268ENSOGAG00000013102HBP19461.649Otolemur_garnettii
ENSXCOG00000020795hbp19161.905ENSOARG00000005055HBP19261.284Ovis_aries
ENSXCOG00000020795hbp19162.268ENSPPAG00000042116HBP19073.251Pan_paniscus
ENSXCOG00000020795hbp19162.190ENSPPRG00000007240HBP19461.777Panthera_pardus
ENSXCOG00000020795hbp19160.124ENSPTIG00000002734HBP19459.711Panthera_tigris_altaica
ENSXCOG00000020795hbp19162.268ENSPTRG00000019575HBP19073.251Pan_troglodytes
ENSXCOG00000020795hbp19162.062ENSPANG00000024385HBP19173.251Papio_anubis
ENSXCOG00000020795hbp19174.286ENSPKIG00000016967hbp19375.054Paramormyrops_kingsleyae
ENSXCOG00000020795hbp19563.057ENSPKIG00000016269HBP19763.270Paramormyrops_kingsleyae
ENSXCOG00000020795hbp19163.674ENSPSIG00000012478HBP18663.244Pelodiscus_sinensis
ENSXCOG00000020795hbp19189.602ENSPMGG00000005789hbp19588.496Periophthalmus_magnuspinnatus
ENSXCOG00000020795hbp19157.237ENSPMGG00000008031-9552.980Periophthalmus_magnuspinnatus
ENSXCOG00000020795hbp19161.111ENSPEMG00000014801Hbp19260.408Peromyscus_maniculatus_bairdii
ENSXCOG00000020795hbp19546.107ENSPMAG00000002631hbp19746.667Petromyzon_marinus
ENSXCOG00000020795hbp19162.910ENSPCIG00000004275HBP18361.807Phascolarctos_cinereus
ENSXCOG00000020795hbp19262.857ENSPFOG00000012271-8960.879Poecilia_formosa
ENSXCOG00000020795hbp19199.552ENSPFOG00000003951hbp19999.552Poecilia_formosa
ENSXCOG00000020795hbp19199.552ENSPLAG00000003142hbp19999.552Poecilia_latipinna
ENSXCOG00000020795hbp19164.176ENSPLAG00000012669-9861.978Poecilia_latipinna
ENSXCOG00000020795hbp19163.656ENSPMEG00000015095-9161.674Poecilia_mexicana
ENSXCOG00000020795hbp19199.552ENSPMEG00000003800hbp19999.552Poecilia_mexicana
ENSXCOG00000020795hbp16264.821ENSPREG00000015242-8863.725Poecilia_reticulata
ENSXCOG00000020795hbp19199.103ENSPREG00000004000hbp19999.103Poecilia_reticulata
ENSXCOG00000020795hbp19161.856ENSPPYG00000017898HBP19161.649Pongo_abelii
ENSXCOG00000020795hbp19161.491ENSPCAG00000014060HBP19560.663Procavia_capensis
ENSXCOG00000020795hbp17467.018ENSPCOG00000015370HBP18666.227Propithecus_coquereli
ENSXCOG00000020795hbp19162.062ENSPVAG00000014543HBP19461.157Pteropus_vampyrus
ENSXCOG00000020795hbp19162.661ENSPNYG00000015063HBP19160.944Pundamilia_nyererei
ENSXCOG00000020795hbp19392.358ENSPNYG00000001079hbp19593.960Pundamilia_nyererei
ENSXCOG00000020795hbp19573.814ENSPNAG00000029977hbp19674.021Pygocentrus_nattereri
ENSXCOG00000020795hbp19161.649ENSRNOG00000008927Hbp19260.736Rattus_norvegicus
ENSXCOG00000020795hbp19155.269ENSRBIG00000042410HBP19354.037Rhinopithecus_bieti
ENSXCOG00000020795hbp19162.062ENSRROG00000036622HBP19173.251Rhinopithecus_roxellana
ENSXCOG00000020795hbp19161.856ENSSBOG00000023603HBP19073.171Saimiri_boliviensis_boliviensis
ENSXCOG00000020795hbp19162.705ENSSHAG00000010948HBP19261.602Sarcophilus_harrisii
ENSXCOG00000020795hbp19571.831ENSSFOG00015011155hbp19972.032Scleropages_formosus
ENSXCOG00000020795hbp19588.223ENSSMAG00000009892hbp19991.275Scophthalmus_maximus
ENSXCOG00000020795hbp19458.333ENSSMAG00000012631-8959.499Scophthalmus_maximus
ENSXCOG00000020795hbp19590.330ENSSDUG00000022273hbp19993.512Seriola_dumerili
ENSXCOG00000020795hbp19260.669ENSSDUG00000015387-8959.119Seriola_dumerili
ENSXCOG00000020795hbp19161.702ENSSLDG00000017324-9760.560Seriola_lalandi_dorsalis
ENSXCOG00000020795hbp19193.512ENSSLDG00000009669hbp19993.512Seriola_lalandi_dorsalis
ENSXCOG00000020795hbp18258.756ENSSARG00000007731HBP19457.604Sorex_araneus
ENSXCOG00000020795hbp19263.542ENSSPUG00000019157HBP18963.061Sphenodon_punctatus
ENSXCOG00000020795hbp19261.489ENSSPAG00000009193-9260.341Stegastes_partitus
ENSXCOG00000020795hbp19193.722ENSSPAG00000004739hbp19993.722Stegastes_partitus
ENSXCOG00000020795hbp19262.055ENSSSCG00000035673HBP19461.807Sus_scrofa
ENSXCOG00000020795hbp19262.162ENSTGUG00000003100HBP19462.322Taeniopygia_guttata
ENSXCOG00000020795hbp19154.506ENSTRUG00000011881-7952.575Takifugu_rubripes
ENSXCOG00000020795hbp19190.157ENSTRUG00000016990hbp19990.157Takifugu_rubripes
ENSXCOG00000020795hbp19154.490ENSTNIG00000002023-9352.857Tetraodon_nigroviridis
ENSXCOG00000020795hbp19189.732ENSTNIG00000016027hbp19889.732Tetraodon_nigroviridis
ENSXCOG00000020795hbp19253.079ENSTBEG00000007793HBP19452.807Tupaia_belangeri
ENSXCOG00000020795hbp19162.603ENSTTRG00000006826HBP19461.570Tursiops_truncatus
ENSXCOG00000020795hbp19162.940ENSUAMG00000005951HBP19261.905Ursus_americanus
ENSXCOG00000020795hbp19162.940ENSUMAG00000018257HBP19261.698Ursus_maritimus
ENSXCOG00000020795hbp17460.582ENSVPAG00000008629HBP19159.162Vicugna_pacos
ENSXCOG00000020795hbp19163.147ENSVVUG00000022009HBP19261.905Vulpes_vulpes
ENSXCOG00000020795hbp19160.986ENSXETG00000005922hbp19457.822Xenopus_tropicalis
ENSXCOG00000020795hbp19163.656ENSXMAG00000007586-9161.674Xiphophorus_maculatus
ENSXCOG00000020795hbp19199.103ENSXMAG00000016455hbp19999.103Xiphophorus_maculatus

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