EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000000349 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 138776 bases
Position: chrGL172919.1:960308-1099083
Accession: XB-GENE-1217623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000000736	ResIII	PF04851.15	5e-07	1	1
ENSXETP00000000744	ResIII	PF04851.15	1e-06	1	1
ENSXETP00000000744	BRK	PF07533.16	4.3e-33	1	2
ENSXETP00000000744	BRK	PF07533.16	4.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000000744	-	9330	-	ENSXETP00000000744	2879 (aa)	-	F6VR24
ENSXETT00000000736	-	9312	-	ENSXETP00000000736	2064 (aa)	-	F6VRC6

Gene Model

Click here to download ENSXETG00000000349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000000349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000000349	chd9	83	69.709	ENSXETG00000026004	chd8	97	55.168
ENSXETG00000000349	chd9	73	61.908	ENSXETG00000017194	CHD8	99	71.580
ENSXETG00000000349	chd9	70	58.339	ENSXETG00000021445	chd6	81	55.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000000349	chd9	96	76.835	ENSG00000177200	CHD9	100	83.019	Homo_sapiens
ENSXETG00000000349	chd9	78	75.383	ENSAPOG00000023034	chd9	96	67.034	Acanthochromis_polyacanthus
ENSXETG00000000349	chd9	96	77.106	ENSAMEG00000016232	CHD9	99	73.188	Ailuropoda_melanoleuca
ENSXETG00000000349	chd9	78	73.378	ENSACIG00000004097	chd9	98	58.174	Amphilophus_citrinellus
ENSXETG00000000349	chd9	77	75.746	ENSAOCG00000005487	chd9	98	67.252	Amphiprion_ocellaris
ENSXETG00000000349	chd9	78	75.776	ENSAPEG00000009859	chd9	96	67.292	Amphiprion_percula
ENSXETG00000000349	chd9	78	76.007	ENSATEG00000002748	chd9	99	59.967	Anabas_testudineus
ENSXETG00000000349	chd9	96	78.369	ENSAPLG00000002826	CHD9	99	74.896	Anas_platyrhynchos
ENSXETG00000000349	chd9	96	77.415	ENSACAG00000016150	CHD9	98	72.959	Anolis_carolinensis
ENSXETG00000000349	chd9	96	77.022	ENSANAG00000015630	CHD9	98	80.586	Aotus_nancymaae
ENSXETG00000000349	chd9	78	74.970	ENSACLG00000016899	chd9	99	58.701	Astatotilapia_calliptera
ENSXETG00000000349	chd9	96	64.041	ENSAMXG00000005652	chd9	98	66.789	Astyanax_mexicanus
ENSXETG00000000349	chd9	96	77.343	ENSBTAG00000002287	CHD9	99	73.791	Bos_taurus
ENSXETG00000000349	chd9	96	76.862	ENSCJAG00000001573	CHD9	98	80.952	Callithrix_jacchus
ENSXETG00000000349	chd9	96	77.007	ENSCAFG00000009699	CHD9	99	73.655	Canis_familiaris
ENSXETG00000000349	chd9	96	77.007	ENSCAFG00020002879	CHD9	98	81.319	Canis_lupus_dingo
ENSXETG00000000349	chd9	96	76.351	ENSCHIG00000021000	CHD9	70	76.351	Capra_hircus
ENSXETG00000000349	chd9	96	76.847	ENSTSYG00000007693	CHD9	98	80.952	Carlito_syrichta
ENSXETG00000000349	chd9	93	69.965	ENSCAPG00000011604	CHD9	80	66.864	Cavia_aperea
ENSXETG00000000349	chd9	96	73.016	ENSCPOG00000036544	CHD9	99	70.407	Cavia_porcellus
ENSXETG00000000349	chd9	96	77.011	ENSCCAG00000036178	CHD9	98	80.952	Cebus_capucinus
ENSXETG00000000349	chd9	96	76.908	ENSCATG00000036753	CHD9	98	80.952	Cercocebus_atys
ENSXETG00000000349	chd9	96	76.648	ENSCLAG00000007137	CHD9	99	86.076	Chinchilla_lanigera
ENSXETG00000000349	chd9	96	76.858	ENSCSAG00000005311	CHD9	99	73.053	Chlorocebus_sabaeus
ENSXETG00000000349	chd9	73	90.385	ENSCHOG00000003935	CHD9	76	90.385	Choloepus_hoffmanni
ENSXETG00000000349	chd9	92	86.143	ENSCPBG00000012459	CHD9	99	86.143	Chrysemys_picta_bellii
ENSXETG00000000349	chd9	96	76.858	ENSCANG00000030349	CHD9	98	80.952	Colobus_angolensis_palliatus
ENSXETG00000000349	chd9	96	75.520	ENSCGRG00001016150	Chd9	99	72.291	Cricetulus_griseus_chok1gshd
ENSXETG00000000349	chd9	96	75.520	ENSCGRG00000012850	Chd9	99	85.731	Cricetulus_griseus_crigri
ENSXETG00000000349	chd9	78	74.168	ENSCSEG00000009209	chd9	94	66.974	Cynoglossus_semilaevis
ENSXETG00000000349	chd9	81	74.868	ENSCVAG00000016195	chd9	92	67.586	Cyprinodon_variegatus
ENSXETG00000000349	chd9	78	74.985	ENSDARG00000074498	chd9	96	67.330	Danio_rerio
ENSXETG00000000349	chd9	76	84.747	ENSDNOG00000006045	CHD9	99	78.205	Dasypus_novemcinctus
ENSXETG00000000349	chd9	60	85.726	ENSDORG00000008523	-	99	76.773	Dipodomys_ordii
ENSXETG00000000349	chd9	88	84.737	ENSETEG00000009565	CHD9	93	84.737	Echinops_telfairi
ENSXETG00000000349	chd9	96	76.996	ENSEASG00005014832	CHD9	97	86.181	Equus_asinus_asinus
ENSXETG00000000349	chd9	96	77.045	ENSECAG00000011505	CHD9	99	73.395	Equus_caballus
ENSXETG00000000349	chd9	79	88.950	ENSEEUG00000014515	CHD9	87	88.950	Erinaceus_europaeus
ENSXETG00000000349	chd9	79	76.088	ENSELUG00000006031	chd9	96	66.829	Esox_lucius
ENSXETG00000000349	chd9	96	77.255	ENSFCAG00000022534	CHD9	98	81.685	Felis_catus
ENSXETG00000000349	chd9	80	85.428	ENSFALG00000013276	CHD9	99	78.759	Ficedula_albicollis
ENSXETG00000000349	chd9	96	76.202	ENSFDAG00000021037	CHD9	99	72.756	Fukomys_damarensis
ENSXETG00000000349	chd9	77	75.643	ENSFHEG00000006068	chd9	95	68.580	Fundulus_heteroclitus
ENSXETG00000000349	chd9	70	76.630	ENSGMOG00000006040	chd9	83	76.902	Gadus_morhua
ENSXETG00000000349	chd9	96	78.518	ENSGALG00000039178	CHD9	99	75.302	Gallus_gallus
ENSXETG00000000349	chd9	77	75.932	ENSGAFG00000010014	chd9	93	68.948	Gambusia_affinis
ENSXETG00000000349	chd9	78	74.392	ENSGACG00000016694	chd9	68	74.649	Gasterosteus_aculeatus
ENSXETG00000000349	chd9	96	76.675	ENSGGOG00000014816	CHD9	98	80.952	Gorilla_gorilla
ENSXETG00000000349	chd9	78	75.137	ENSHBUG00000023322	chd9	96	66.953	Haplochromis_burtoni
ENSXETG00000000349	chd9	96	76.301	ENSHGLG00000014938	CHD9	99	86.076	Heterocephalus_glaber_female
ENSXETG00000000349	chd9	85	69.775	ENSHCOG00000000937	chd9	95	67.483	Hippocampus_comes
ENSXETG00000000349	chd9	78	75.976	ENSIPUG00000016448	chd9	94	69.778	Ictalurus_punctatus
ENSXETG00000000349	chd9	96	76.648	ENSSTOG00000022273	CHD9	99	86.421	Ictidomys_tridecemlineatus
ENSXETG00000000349	chd9	60	86.290	ENSJJAG00000015741	-	99	77.255	Jaculus_jaculus
ENSXETG00000000349	chd9	78	75.856	ENSKMAG00000016784	chd9	93	69.059	Kryptolebias_marmoratus
ENSXETG00000000349	chd9	92	66.650	ENSLBEG00000012077	chd9	97	66.049	Labrus_bergylta
ENSXETG00000000349	chd9	96	68.455	ENSLACG00000005557	CHD9	99	66.541	Latimeria_chalumnae
ENSXETG00000000349	chd9	87	71.499	ENSLOCG00000007225	chd9	99	70.526	Lepisosteus_oculatus
ENSXETG00000000349	chd9	96	76.511	ENSLAFG00000015374	CHD9	99	72.931	Loxodonta_africana
ENSXETG00000000349	chd9	96	76.858	ENSMFAG00000041354	CHD9	98	80.952	Macaca_fascicularis
ENSXETG00000000349	chd9	96	76.908	ENSMMUG00000016310	CHD9	98	80.952	Macaca_mulatta
ENSXETG00000000349	chd9	96	76.908	ENSMNEG00000031494	CHD9	100	75.371	Macaca_nemestrina
ENSXETG00000000349	chd9	96	76.957	ENSMLEG00000043219	CHD9	98	80.952	Mandrillus_leucophaeus
ENSXETG00000000349	chd9	78	76.190	ENSMAMG00000003909	chd9	99	59.364	Mastacembelus_armatus
ENSXETG00000000349	chd9	78	75.791	ENSMZEG00005006581	chd9	96	67.525	Maylandia_zebra
ENSXETG00000000349	chd9	96	74.763	ENSMGAG00000004642	CHD9	99	72.401	Meleagris_gallopavo
ENSXETG00000000349	chd9	96	76.996	ENSMICG00000016679	CHD9	98	80.952	Microcebus_murinus
ENSXETG00000000349	chd9	78	75.811	ENSMMOG00000016406	chd9	97	60.254	Mola_mola
ENSXETG00000000349	chd9	67	84.113	ENSMODG00000013142	-	98	85.621	Monodelphis_domestica
ENSXETG00000000349	chd9	80	74.260	ENSMALG00000013306	chd9	99	59.026	Monopterus_albus
ENSXETG00000000349	chd9	96	74.517	MGP_CAROLIEiJ_G0031364	Chd9	99	71.093	Mus_caroli
ENSXETG00000000349	chd9	96	74.417	ENSMUSG00000056608	Chd9	99	84.580	Mus_musculus
ENSXETG00000000349	chd9	96	74.355	MGP_PahariEiJ_G0022964	Chd9	99	69.790	Mus_pahari
ENSXETG00000000349	chd9	96	74.467	MGP_SPRETEiJ_G0032483	Chd9	99	71.064	Mus_spretus
ENSXETG00000000349	chd9	96	77.304	ENSMPUG00000003285	CHD9	99	74.093	Mustela_putorius_furo
ENSXETG00000000349	chd9	96	76.797	ENSMLUG00000004456	CHD9	99	73.085	Myotis_lucifugus
ENSXETG00000000349	chd9	78	75.774	ENSNBRG00000009423	chd9	96	66.369	Neolamprologus_brichardi
ENSXETG00000000349	chd9	96	76.908	ENSNLEG00000001026	CHD9	100	75.429	Nomascus_leucogenys
ENSXETG00000000349	chd9	78	99.248	ENSMEUG00000008222	-	84	98.693	Notamacropus_eugenii
ENSXETG00000000349	chd9	73	97.744	ENSOPRG00000011168	CHD9	85	94.571	Ochotona_princeps
ENSXETG00000000349	chd9	96	76.564	ENSODEG00000004466	CHD9	99	73.092	Octodon_degus
ENSXETG00000000349	chd9	96	65.531	ENSONIG00000002816	chd9	98	67.918	Oreochromis_niloticus
ENSXETG00000000349	chd9	96	77.469	ENSOANG00000013401	CHD9	99	72.865	Ornithorhynchus_anatinus
ENSXETG00000000349	chd9	80	83.789	ENSOCUG00000001016	CHD9	98	77.889	Oryctolagus_cuniculus
ENSXETG00000000349	chd9	77	74.603	ENSORLG00000013810	chd9	96	66.872	Oryzias_latipes
ENSXETG00000000349	chd9	77	74.462	ENSORLG00020020665	chd9	99	59.154	Oryzias_latipes_hni
ENSXETG00000000349	chd9	77	75.595	ENSORLG00015019126	chd9	93	68.279	Oryzias_latipes_hsok
ENSXETG00000000349	chd9	64	77.384	ENSOMEG00000015978	chd9	99	62.395	Oryzias_melastigma
ENSXETG00000000349	chd9	96	76.587	ENSOGAG00000002110	CHD9	99	73.386	Otolemur_garnettii
ENSXETG00000000349	chd9	96	77.030	ENSOARG00000017664	CHD9	99	73.577	Ovis_aries
ENSXETG00000000349	chd9	79	82.855	ENSPPAG00000039388	-	99	77.151	Pan_paniscus
ENSXETG00000000349	chd9	96	77.255	ENSPPRG00000004801	CHD9	98	81.685	Panthera_pardus
ENSXETG00000000349	chd9	96	75.867	ENSPTIG00000021854	CHD9	99	72.715	Panthera_tigris_altaica
ENSXETG00000000349	chd9	96	76.786	ENSPTRG00000008113	CHD9	98	80.952	Pan_troglodytes
ENSXETG00000000349	chd9	96	77.056	ENSPANG00000019307	CHD9	98	80.952	Papio_anubis
ENSXETG00000000349	chd9	93	71.506	ENSPKIG00000025401	-	99	57.643	Paramormyrops_kingsleyae
ENSXETG00000000349	chd9	96	67.178	ENSPKIG00000021876	chd9	98	68.243	Paramormyrops_kingsleyae
ENSXETG00000000349	chd9	83	77.393	ENSPSIG00000008099	CHD9	99	77.060	Pelodiscus_sinensis
ENSXETG00000000349	chd9	56	70.472	ENSPMAG00000006035	-	88	70.523	Petromyzon_marinus
ENSXETG00000000349	chd9	96	77.248	ENSPCIG00000017215	CHD9	97	83.243	Phascolarctos_cinereus
ENSXETG00000000349	chd9	77	75.671	ENSPFOG00000015839	chd9	90	64.195	Poecilia_formosa
ENSXETG00000000349	chd9	77	76.272	ENSPLAG00000011118	chd9	96	67.842	Poecilia_latipinna
ENSXETG00000000349	chd9	77	75.475	ENSPMEG00000015106	chd9	89	64.928	Poecilia_mexicana
ENSXETG00000000349	chd9	77	76.225	ENSPREG00000006473	chd9	93	68.821	Poecilia_reticulata
ENSXETG00000000349	chd9	96	76.908	ENSPPYG00000007348	CHD9	99	73.533	Pongo_abelii
ENSXETG00000000349	chd9	85	86.972	ENSPCAG00000007564	CHD9	86	86.972	Procavia_capensis
ENSXETG00000000349	chd9	96	74.864	ENSPCOG00000028433	CHD9	98	80.952	Propithecus_coquereli
ENSXETG00000000349	chd9	93	71.894	ENSPVAG00000015617	CHD9	97	71.726	Pteropus_vampyrus
ENSXETG00000000349	chd9	78	75.653	ENSPNYG00000010947	chd9	97	66.452	Pundamilia_nyererei
ENSXETG00000000349	chd9	88	68.309	ENSPNAG00000024141	chd9	99	66.950	Pygocentrus_nattereri
ENSXETG00000000349	chd9	96	71.832	ENSRNOG00000049302	Chd9	100	73.392	Rattus_norvegicus
ENSXETG00000000349	chd9	79	83.820	ENSRBIG00000035553	CHD9	98	80.952	Rhinopithecus_bieti
ENSXETG00000000349	chd9	78	84.383	ENSRROG00000033278	CHD9	98	80.952	Rhinopithecus_roxellana
ENSXETG00000000349	chd9	96	76.912	ENSSBOG00000030240	CHD9	98	81.685	Saimiri_boliviensis_boliviensis
ENSXETG00000000349	chd9	96	77.304	ENSSHAG00000002719	CHD9	99	73.354	Sarcophilus_harrisii
ENSXETG00000000349	chd9	89	68.743	ENSSFOG00015001327	chd9	97	67.535	Scleropages_formosus
ENSXETG00000000349	chd9	85	72.552	ENSSFOG00015020209	chd9	98	68.460	Scleropages_formosus
ENSXETG00000000349	chd9	77	75.076	ENSSMAG00000008953	chd9	95	67.549	Scophthalmus_maximus
ENSXETG00000000349	chd9	78	75.608	ENSSDUG00000006139	chd9	97	67.250	Seriola_dumerili
ENSXETG00000000349	chd9	78	75.654	ENSSLDG00000017818	chd9	97	67.191	Seriola_lalandi_dorsalis
ENSXETG00000000349	chd9	92	85.775	ENSSARG00000010632	CHD9	70	85.775	Sorex_araneus
ENSXETG00000000349	chd9	78	75.243	ENSSPAG00000021649	chd9	96	66.802	Stegastes_partitus
ENSXETG00000000349	chd9	96	76.482	ENSSSCG00000033591	CHD9	70	76.482	Sus_scrofa
ENSXETG00000000349	chd9	96	78.065	ENSTGUG00000007476	CHD9	100	75.686	Taeniopygia_guttata
ENSXETG00000000349	chd9	78	75.000	ENSTRUG00000009125	chd9	99	59.268	Takifugu_rubripes
ENSXETG00000000349	chd9	57	82.927	ENSTNIG00000003825	chd9	85	82.927	Tetraodon_nigroviridis
ENSXETG00000000349	chd9	74	70.793	ENSTBEG00000016052	-	79	70.793	Tupaia_belangeri
ENSXETG00000000349	chd9	96	77.095	ENSTTRG00000012674	CHD9	90	74.809	Tursiops_truncatus
ENSXETG00000000349	chd9	53	83.257	ENSUAMG00000022706	CHD9	98	81.319	Ursus_americanus
ENSXETG00000000349	chd9	96	74.494	ENSUMAG00000004043	CHD9	97	91.525	Ursus_maritimus
ENSXETG00000000349	chd9	93	83.631	ENSVPAG00000001374	CHD9	97	76.600	Vicugna_pacos
ENSXETG00000000349	chd9	96	76.957	ENSVVUG00000019435	CHD9	99	73.621	Vulpes_vulpes
ENSXETG00000000349	chd9	77	76.071	ENSXCOG00000012997	chd9	93	69.410	Xiphophorus_couchianus
ENSXETG00000000349	chd9	77	75.778	ENSXMAG00000016192	chd9	96	69.092	Xiphophorus_maculatus