EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000000592 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 21421 bases
Position: chrGL172722.1:2224709-2246129
Accession: XB-GENE-962711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000001308	RTC	PF01137.21	1.5e-54	1	1
ENSXETP00000001308	RTC_insert	PF05189.13	1.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000001308	-	1122	-	ENSXETP00000001308	373 (aa)	-	F7DYY9

Gene Model

Click here to download ENSXETG00000000592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000000592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000000592	rcl1	100	75.401	ENSG00000120158	RCL1	100	75.401	Homo_sapiens
ENSXETG00000000592	rcl1	100	71.733	ENSAPOG00000015666	rcl1	100	71.733	Acanthochromis_polyacanthus
ENSXETG00000000592	rcl1	100	75.668	ENSAMEG00000002631	RCL1	100	75.668	Ailuropoda_melanoleuca
ENSXETG00000000592	rcl1	100	71.467	ENSACIG00000021195	rcl1	100	71.467	Amphilophus_citrinellus
ENSXETG00000000592	rcl1	100	71.200	ENSAOCG00000002223	rcl1	100	71.200	Amphiprion_ocellaris
ENSXETG00000000592	rcl1	100	71.200	ENSAPEG00000006905	rcl1	100	71.200	Amphiprion_percula
ENSXETG00000000592	rcl1	100	69.067	ENSATEG00000020026	rcl1	100	69.067	Anabas_testudineus
ENSXETG00000000592	rcl1	88	72.256	ENSAPLG00000006031	RCL1	100	72.256	Anas_platyrhynchos
ENSXETG00000000592	rcl1	100	72.727	ENSACAG00000003640	RCL1	100	72.727	Anolis_carolinensis
ENSXETG00000000592	rcl1	100	75.401	ENSANAG00000037372	RCL1	100	75.401	Aotus_nancymaae
ENSXETG00000000592	rcl1	100	72.000	ENSACLG00000021724	rcl1	100	72.000	Astatotilapia_calliptera
ENSXETG00000000592	rcl1	98	68.564	ENSAMXG00000033394	rcl1	99	68.564	Astyanax_mexicanus
ENSXETG00000000592	rcl1	98	44.385	WBGene00022852	ZK1127.5	98	44.385	Caenorhabditis_elegans
ENSXETG00000000592	rcl1	100	75.134	ENSCJAG00000011202	RCL1	100	75.134	Callithrix_jacchus
ENSXETG00000000592	rcl1	100	75.401	ENSCAFG00000002091	RCL1	100	75.401	Canis_familiaris
ENSXETG00000000592	rcl1	100	75.401	ENSCAFG00020000638	RCL1	78	75.401	Canis_lupus_dingo
ENSXETG00000000592	rcl1	100	74.599	ENSCHIG00000012407	RCL1	100	74.599	Capra_hircus
ENSXETG00000000592	rcl1	88	77.134	ENSTSYG00000009592	RCL1	97	71.429	Carlito_syrichta
ENSXETG00000000592	rcl1	69	67.232	ENSCAPG00000013575	RCL1	100	67.232	Cavia_aperea
ENSXETG00000000592	rcl1	100	74.866	ENSCPOG00000015354	RCL1	100	74.866	Cavia_porcellus
ENSXETG00000000592	rcl1	100	75.134	ENSCCAG00000033505	RCL1	100	75.134	Cebus_capucinus
ENSXETG00000000592	rcl1	100	75.668	ENSCATG00000034721	RCL1	100	75.668	Cercocebus_atys
ENSXETG00000000592	rcl1	100	74.866	ENSCLAG00000007445	RCL1	100	74.866	Chinchilla_lanigera
ENSXETG00000000592	rcl1	100	75.668	ENSCSAG00000008811	RCL1	100	75.668	Chlorocebus_sabaeus
ENSXETG00000000592	rcl1	85	65.094	ENSCHOG00000007216	RCL1	98	65.094	Choloepus_hoffmanni
ENSXETG00000000592	rcl1	100	74.866	ENSCPBG00000025481	RCL1	94	75.152	Chrysemys_picta_bellii
ENSXETG00000000592	rcl1	98	54.987	ENSCING00000019565	-	98	54.987	Ciona_intestinalis
ENSXETG00000000592	rcl1	100	75.668	ENSCANG00000027099	RCL1	100	75.668	Colobus_angolensis_palliatus
ENSXETG00000000592	rcl1	100	75.134	ENSCGRG00001013748	Rcl1	100	75.134	Cricetulus_griseus_chok1gshd
ENSXETG00000000592	rcl1	88	76.292	ENSCGRG00000005843	Rcl1	99	76.292	Cricetulus_griseus_crigri
ENSXETG00000000592	rcl1	100	70.133	ENSCSEG00000000712	rcl1	98	70.133	Cynoglossus_semilaevis
ENSXETG00000000592	rcl1	100	73.600	ENSCVAG00000011536	rcl1	100	73.600	Cyprinodon_variegatus
ENSXETG00000000592	rcl1	98	67.120	ENSDARG00000038312	rcl1	100	67.120	Danio_rerio
ENSXETG00000000592	rcl1	71	75.564	ENSDNOG00000019911	RCL1	100	75.564	Dasypus_novemcinctus
ENSXETG00000000592	rcl1	100	75.936	ENSDORG00000015645	Rcl1	100	75.936	Dipodomys_ordii
ENSXETG00000000592	rcl1	99	50.131	FBgn0020909	Rtc1	99	50.131	Drosophila_melanogaster
ENSXETG00000000592	rcl1	88	56.098	ENSETEG00000014087	-	100	56.098	Echinops_telfairi
ENSXETG00000000592	rcl1	98	50.949	ENSEBUG00000016621	-	98	50.949	Eptatretus_burgeri
ENSXETG00000000592	rcl1	100	74.866	ENSEASG00005010653	RCL1	100	74.866	Equus_asinus_asinus
ENSXETG00000000592	rcl1	100	74.866	ENSECAG00000015973	RCL1	100	74.866	Equus_caballus
ENSXETG00000000592	rcl1	100	62.735	ENSEEUG00000009801	RCL1	100	62.735	Erinaceus_europaeus
ENSXETG00000000592	rcl1	100	68.000	ENSELUG00000007353	rcl1	100	68.000	Esox_lucius
ENSXETG00000000592	rcl1	100	75.401	ENSFCAG00000014557	RCL1	100	75.401	Felis_catus
ENSXETG00000000592	rcl1	97	67.582	ENSFALG00000010553	RCL1	96	67.582	Ficedula_albicollis
ENSXETG00000000592	rcl1	88	75.305	ENSFDAG00000004209	RCL1	100	75.305	Fukomys_damarensis
ENSXETG00000000592	rcl1	100	72.800	ENSFHEG00000011228	rcl1	100	72.800	Fundulus_heteroclitus
ENSXETG00000000592	rcl1	100	70.667	ENSGMOG00000004677	rcl1	100	70.667	Gadus_morhua
ENSXETG00000000592	rcl1	100	71.467	ENSGALG00000015024	RCL1	100	71.467	Gallus_gallus
ENSXETG00000000592	rcl1	100	71.733	ENSGAFG00000007257	rcl1	100	71.733	Gambusia_affinis
ENSXETG00000000592	rcl1	100	70.933	ENSGACG00000017474	rcl1	100	70.933	Gasterosteus_aculeatus
ENSXETG00000000592	rcl1	100	74.599	ENSGAGG00000003689	RCL1	100	74.599	Gopherus_agassizii
ENSXETG00000000592	rcl1	100	75.401	ENSGGOG00000015041	RCL1	100	75.401	Gorilla_gorilla
ENSXETG00000000592	rcl1	100	72.533	ENSHBUG00000001393	rcl1	100	72.533	Haplochromis_burtoni
ENSXETG00000000592	rcl1	100	74.599	ENSHGLG00000016452	RCL1	100	74.599	Heterocephalus_glaber_female
ENSXETG00000000592	rcl1	100	63.636	ENSHGLG00000005368	-	100	63.636	Heterocephalus_glaber_female
ENSXETG00000000592	rcl1	100	69.519	ENSHGLG00100008718	-	100	69.519	Heterocephalus_glaber_male
ENSXETG00000000592	rcl1	100	64.439	ENSHGLG00100018010	-	100	64.439	Heterocephalus_glaber_male
ENSXETG00000000592	rcl1	100	71.467	ENSHCOG00000020170	rcl1	100	71.467	Hippocampus_comes
ENSXETG00000000592	rcl1	98	69.293	ENSIPUG00000018054	RCL1	99	69.293	Ictalurus_punctatus
ENSXETG00000000592	rcl1	100	74.866	ENSSTOG00000000023	RCL1	100	74.866	Ictidomys_tridecemlineatus
ENSXETG00000000592	rcl1	100	76.203	ENSJJAG00000022803	-	100	76.203	Jaculus_jaculus
ENSXETG00000000592	rcl1	100	68.182	ENSJJAG00000015632	-	100	68.182	Jaculus_jaculus
ENSXETG00000000592	rcl1	54	55.446	ENSJJAG00000000764	-	98	55.446	Jaculus_jaculus
ENSXETG00000000592	rcl1	100	71.200	ENSKMAG00000011946	rcl1	100	71.200	Kryptolebias_marmoratus
ENSXETG00000000592	rcl1	100	68.800	ENSLBEG00000003957	rcl1	100	68.800	Labrus_bergylta
ENSXETG00000000592	rcl1	85	77.987	ENSLACG00000004594	RCL1	98	77.987	Latimeria_chalumnae
ENSXETG00000000592	rcl1	100	75.668	ENSLOCG00000010148	rcl1	98	75.668	Lepisosteus_oculatus
ENSXETG00000000592	rcl1	100	73.797	ENSLAFG00000017495	RCL1	100	73.797	Loxodonta_africana
ENSXETG00000000592	rcl1	100	75.668	ENSMFAG00000037906	RCL1	100	75.668	Macaca_fascicularis
ENSXETG00000000592	rcl1	100	75.668	ENSMNEG00000012288	RCL1	100	75.668	Macaca_nemestrina
ENSXETG00000000592	rcl1	100	75.668	ENSMLEG00000043088	RCL1	100	75.668	Mandrillus_leucophaeus
ENSXETG00000000592	rcl1	100	71.733	ENSMAMG00000008311	rcl1	100	71.733	Mastacembelus_armatus
ENSXETG00000000592	rcl1	100	72.000	ENSMZEG00005017292	rcl1	100	72.000	Maylandia_zebra
ENSXETG00000000592	rcl1	58	66.667	ENSMGAG00000002245	RCL1	100	66.667	Meleagris_gallopavo
ENSXETG00000000592	rcl1	58	74.074	ENSMAUG00000008922	Rcl1	100	74.074	Mesocricetus_auratus
ENSXETG00000000592	rcl1	100	75.401	ENSMICG00000015562	RCL1	100	75.401	Microcebus_murinus
ENSXETG00000000592	rcl1	100	74.599	ENSMOCG00000012145	Rcl1	100	74.599	Microtus_ochrogaster
ENSXETG00000000592	rcl1	100	69.149	ENSMMOG00000021264	rcl1	100	69.149	Mola_mola
ENSXETG00000000592	rcl1	95	75.562	ENSMODG00000015377	RCL1	94	75.562	Monodelphis_domestica
ENSXETG00000000592	rcl1	100	69.867	ENSMALG00000018618	rcl1	100	69.867	Monopterus_albus
ENSXETG00000000592	rcl1	100	75.134	MGP_CAROLIEiJ_G0022853	Rcl1	100	75.134	Mus_caroli
ENSXETG00000000592	rcl1	100	74.599	ENSMUSG00000024785	Rcl1	100	74.599	Mus_musculus
ENSXETG00000000592	rcl1	100	74.599	MGP_PahariEiJ_G0014346	Rcl1	100	74.599	Mus_pahari
ENSXETG00000000592	rcl1	100	74.866	MGP_SPRETEiJ_G0023771	Rcl1	100	74.866	Mus_spretus
ENSXETG00000000592	rcl1	100	75.668	ENSMPUG00000004998	RCL1	100	75.668	Mustela_putorius_furo
ENSXETG00000000592	rcl1	100	73.797	ENSMLUG00000009654	RCL1	100	73.797	Myotis_lucifugus
ENSXETG00000000592	rcl1	100	74.599	ENSNGAG00000015327	Rcl1	100	74.599	Nannospalax_galili
ENSXETG00000000592	rcl1	92	70.349	ENSNBRG00000019854	rcl1	93	70.349	Neolamprologus_brichardi
ENSXETG00000000592	rcl1	100	73.190	ENSNLEG00000008891	RCL1	100	73.190	Nomascus_leucogenys
ENSXETG00000000592	rcl1	100	70.588	ENSMEUG00000007653	RCL1	100	70.588	Notamacropus_eugenii
ENSXETG00000000592	rcl1	100	74.866	ENSOPRG00000010965	RCL1	100	74.866	Ochotona_princeps
ENSXETG00000000592	rcl1	88	61.862	ENSODEG00000004151	RCL1	96	61.862	Octodon_degus
ENSXETG00000000592	rcl1	100	72.267	ENSONIG00000003871	rcl1	100	72.267	Oreochromis_niloticus
ENSXETG00000000592	rcl1	66	72.289	ENSOANG00000013193	-	98	72.289	Ornithorhynchus_anatinus
ENSXETG00000000592	rcl1	100	75.936	ENSOCUG00000008161	RCL1	100	75.936	Oryctolagus_cuniculus
ENSXETG00000000592	rcl1	100	69.067	ENSORLG00000010443	rcl1	100	69.067	Oryzias_latipes
ENSXETG00000000592	rcl1	100	69.067	ENSORLG00020012211	rcl1	100	69.067	Oryzias_latipes_hni
ENSXETG00000000592	rcl1	100	68.800	ENSORLG00015001122	rcl1	100	68.800	Oryzias_latipes_hsok
ENSXETG00000000592	rcl1	100	70.933	ENSOMEG00000022976	rcl1	88	70.933	Oryzias_melastigma
ENSXETG00000000592	rcl1	100	75.668	ENSOGAG00000007480	RCL1	100	75.668	Otolemur_garnettii
ENSXETG00000000592	rcl1	100	74.599	ENSOARG00000013463	RCL1	100	74.599	Ovis_aries
ENSXETG00000000592	rcl1	100	75.134	ENSPPAG00000037958	RCL1	100	75.134	Pan_paniscus
ENSXETG00000000592	rcl1	100	74.599	ENSPPRG00000022645	RCL1	100	74.599	Panthera_pardus
ENSXETG00000000592	rcl1	87	76.453	ENSPTIG00000019031	RCL1	100	74.537	Panthera_tigris_altaica
ENSXETG00000000592	rcl1	100	74.866	ENSPTRG00000020743	RCL1	100	74.866	Pan_troglodytes
ENSXETG00000000592	rcl1	100	75.668	ENSPANG00000025151	RCL1	100	75.668	Papio_anubis
ENSXETG00000000592	rcl1	100	70.667	ENSPKIG00000021022	rcl1	100	70.667	Paramormyrops_kingsleyae
ENSXETG00000000592	rcl1	88	75.380	ENSPSIG00000012302	RCL1	100	75.380	Pelodiscus_sinensis
ENSXETG00000000592	rcl1	100	69.600	ENSPMGG00000024007	rcl1	100	69.600	Periophthalmus_magnuspinnatus
ENSXETG00000000592	rcl1	100	75.134	ENSPEMG00000023275	Rcl1	100	75.134	Peromyscus_maniculatus_bairdii
ENSXETG00000000592	rcl1	100	75.936	ENSPCIG00000000188	RCL1	100	75.936	Phascolarctos_cinereus
ENSXETG00000000592	rcl1	100	72.000	ENSPFOG00000019682	rcl1	99	72.000	Poecilia_formosa
ENSXETG00000000592	rcl1	100	72.267	ENSPLAG00000022354	rcl1	100	72.267	Poecilia_latipinna
ENSXETG00000000592	rcl1	100	72.000	ENSPMEG00000008131	rcl1	100	72.000	Poecilia_mexicana
ENSXETG00000000592	rcl1	100	71.733	ENSPREG00000008032	rcl1	100	71.733	Poecilia_reticulata
ENSXETG00000000592	rcl1	100	75.668	ENSPPYG00000019244	RCL1	100	75.668	Pongo_abelii
ENSXETG00000000592	rcl1	100	71.925	ENSPCAG00000001440	RCL1	100	71.925	Procavia_capensis
ENSXETG00000000592	rcl1	100	75.936	ENSPCOG00000009611	RCL1	100	75.936	Propithecus_coquereli
ENSXETG00000000592	rcl1	100	75.134	ENSPVAG00000015752	RCL1	100	75.134	Pteropus_vampyrus
ENSXETG00000000592	rcl1	100	72.267	ENSPNYG00000012910	rcl1	100	72.267	Pundamilia_nyererei
ENSXETG00000000592	rcl1	99	68.449	ENSPNAG00000028307	rcl1	92	68.449	Pygocentrus_nattereri
ENSXETG00000000592	rcl1	100	74.332	ENSRNOG00000015491	Rcl1	100	74.332	Rattus_norvegicus
ENSXETG00000000592	rcl1	100	75.401	ENSRBIG00000035818	RCL1	100	75.401	Rhinopithecus_bieti
ENSXETG00000000592	rcl1	100	75.668	ENSRROG00000029781	RCL1	100	75.668	Rhinopithecus_roxellana
ENSXETG00000000592	rcl1	97	35.925	YOL010W	-	97	35.925	Saccharomyces_cerevisiae
ENSXETG00000000592	rcl1	100	75.134	ENSSBOG00000026369	RCL1	100	75.134	Saimiri_boliviensis_boliviensis
ENSXETG00000000592	rcl1	88	75.529	ENSSHAG00000014086	RCL1	100	75.529	Sarcophilus_harrisii
ENSXETG00000000592	rcl1	100	72.533	ENSSFOG00015023020	rcl1	100	72.533	Scleropages_formosus
ENSXETG00000000592	rcl1	100	70.667	ENSSMAG00000019751	rcl1	86	70.667	Scophthalmus_maximus
ENSXETG00000000592	rcl1	100	72.267	ENSSDUG00000006349	rcl1	100	72.267	Seriola_dumerili
ENSXETG00000000592	rcl1	100	72.267	ENSSLDG00000022076	rcl1	100	72.267	Seriola_lalandi_dorsalis
ENSXETG00000000592	rcl1	100	75.134	ENSSARG00000009260	RCL1	100	75.134	Sorex_araneus
ENSXETG00000000592	rcl1	100	75.134	ENSSPUG00000016330	RCL1	100	75.134	Sphenodon_punctatus
ENSXETG00000000592	rcl1	100	71.200	ENSSPAG00000018038	rcl1	100	71.200	Stegastes_partitus
ENSXETG00000000592	rcl1	100	75.401	ENSSSCG00000005217	RCL1	83	75.401	Sus_scrofa
ENSXETG00000000592	rcl1	100	70.213	ENSTGUG00000005138	RCL1	100	70.213	Taeniopygia_guttata
ENSXETG00000000592	rcl1	100	70.133	ENSTRUG00000010493	rcl1	100	70.133	Takifugu_rubripes
ENSXETG00000000592	rcl1	98	69.837	ENSTNIG00000013214	rcl1	98	69.837	Tetraodon_nigroviridis
ENSXETG00000000592	rcl1	100	70.321	ENSTBEG00000016339	RCL1	100	70.321	Tupaia_belangeri
ENSXETG00000000592	rcl1	100	74.064	ENSTTRG00000016525	RCL1	100	74.064	Tursiops_truncatus
ENSXETG00000000592	rcl1	100	75.668	ENSUAMG00000005598	RCL1	98	77.673	Ursus_americanus
ENSXETG00000000592	rcl1	88	76.829	ENSUMAG00000017890	RCL1	97	76.829	Ursus_maritimus
ENSXETG00000000592	rcl1	88	76.829	ENSVPAG00000009188	RCL1	100	76.829	Vicugna_pacos
ENSXETG00000000592	rcl1	88	76.596	ENSVVUG00000007304	RCL1	89	76.596	Vulpes_vulpes
ENSXETG00000000592	rcl1	100	72.267	ENSXCOG00000004922	rcl1	100	72.267	Xiphophorus_couchianus
ENSXETG00000000592	rcl1	100	72.267	ENSXMAG00000022366	RCL1	100	72.267	Xiphophorus_maculatus