EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000000703 (Gene tree)
Gene ID: -
Gene Symbol: brix1
Alias: -
Full Name: Xenopus tropicalis BRX1%2C biogenesis of ribosomes (brix1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7192 bases
Position: chrGL173178.1:185828-193019
Accession: NM_001045754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000001561	Brix	PF04427.18	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000001561	-	1107	-	ENSXETP00000001561	339 (aa)	-	F7E3M4

Gene Model

Click here to download ENSXETG00000000703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000000703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000000703	brix1	100	74.000	ENSG00000113460	BRIX1	98	74.286	Homo_sapiens
ENSXETG00000000703	brix1	99	73.392	ENSAPOG00000020334	bxdc2	99	73.392	Acanthochromis_polyacanthus
ENSXETG00000000703	brix1	100	74.640	ENSAMEG00000003295	BRIX1	98	74.640	Ailuropoda_melanoleuca
ENSXETG00000000703	brix1	99	72.781	ENSACIG00000017003	bxdc2	99	72.781	Amphilophus_citrinellus
ENSXETG00000000703	brix1	99	73.684	ENSAOCG00000000941	bxdc2	99	73.913	Amphiprion_ocellaris
ENSXETG00000000703	brix1	99	73.684	ENSAPEG00000017124	bxdc2	99	73.913	Amphiprion_percula
ENSXETG00000000703	brix1	99	72.515	ENSATEG00000016635	bxdc2	99	72.515	Anabas_testudineus
ENSXETG00000000703	brix1	86	70.307	ENSAPLG00000006647	BRIX1	99	70.307	Anas_platyrhynchos
ENSXETG00000000703	brix1	99	73.731	ENSACAG00000008586	BRIX1	99	71.714	Anolis_carolinensis
ENSXETG00000000703	brix1	100	67.246	ENSANAG00000010505	-	98	67.246	Aotus_nancymaae
ENSXETG00000000703	brix1	100	72.549	ENSANAG00000022329	-	98	72.549	Aotus_nancymaae
ENSXETG00000000703	brix1	99	72.222	ENSACLG00000005213	bxdc2	99	72.222	Astatotilapia_calliptera
ENSXETG00000000703	brix1	88	74.582	ENSAMXG00000043121	bxdc2	99	69.883	Astyanax_mexicanus
ENSXETG00000000703	brix1	100	74.352	ENSBTAG00000019211	BRIX1	98	74.352	Bos_taurus
ENSXETG00000000703	brix1	68	53.913	WBGene00019678	K12H4.3	65	53.913	Caenorhabditis_elegans
ENSXETG00000000703	brix1	100	72.911	ENSCJAG00000007390	-	98	72.911	Callithrix_jacchus
ENSXETG00000000703	brix1	100	74.640	ENSCJAG00000018506	-	98	74.640	Callithrix_jacchus
ENSXETG00000000703	brix1	100	70.571	ENSCAFG00000018797	BRIX1	98	72.046	Canis_familiaris
ENSXETG00000000703	brix1	100	65.143	ENSCAFG00020016783	BRIX1	98	66.571	Canis_lupus_dingo
ENSXETG00000000703	brix1	100	70.605	ENSCHIG00000015024	BRIX1	98	70.605	Capra_hircus
ENSXETG00000000703	brix1	98	76.176	ENSTSYG00000002898	BRIX1	97	76.176	Carlito_syrichta
ENSXETG00000000703	brix1	86	63.605	ENSCAPG00000009776	BRIX1	98	63.605	Cavia_aperea
ENSXETG00000000703	brix1	88	79.070	ENSCPOG00000022064	BRIX1	98	72.647	Cavia_porcellus
ENSXETG00000000703	brix1	100	74.928	ENSCCAG00000033405	BRIX1	98	74.928	Cebus_capucinus
ENSXETG00000000703	brix1	100	74.640	ENSCATG00000037721	BRIX1	99	74.928	Cercocebus_atys
ENSXETG00000000703	brix1	100	72.543	ENSCLAG00000008124	BRIX1	98	72.543	Chinchilla_lanigera
ENSXETG00000000703	brix1	100	74.640	ENSCSAG00000017117	BRIX1	98	74.640	Chlorocebus_sabaeus
ENSXETG00000000703	brix1	92	63.057	ENSCHOG00000012227	-	90	63.057	Choloepus_hoffmanni
ENSXETG00000000703	brix1	100	72.911	ENSCHOG00000001790	-	98	72.622	Choloepus_hoffmanni
ENSXETG00000000703	brix1	100	74.203	ENSCPBG00000021309	BRIX1	98	74.493	Chrysemys_picta_bellii
ENSXETG00000000703	brix1	77	56.322	ENSCING00000001695	-	98	56.322	Ciona_intestinalis
ENSXETG00000000703	brix1	88	53.156	ENSCSAVG00000008644	-	98	53.156	Ciona_savignyi
ENSXETG00000000703	brix1	100	74.928	ENSCANG00000022969	BRIX1	97	75.216	Colobus_angolensis_palliatus
ENSXETG00000000703	brix1	100	72.334	ENSCGRG00001007932	Brix1	98	72.334	Cricetulus_griseus_chok1gshd
ENSXETG00000000703	brix1	100	72.334	ENSCGRG00000016743	Brix1	98	72.334	Cricetulus_griseus_crigri
ENSXETG00000000703	brix1	99	72.434	ENSCSEG00000019821	bxdc2	100	72.434	Cynoglossus_semilaevis
ENSXETG00000000703	brix1	99	71.848	ENSCVAG00000016942	bxdc2	99	71.848	Cyprinodon_variegatus
ENSXETG00000000703	brix1	85	72.917	ENSDARG00000098935	bxdc2	78	70.764	Danio_rerio
ENSXETG00000000703	brix1	100	73.199	ENSDNOG00000002878	BRIX1	98	73.199	Dasypus_novemcinctus
ENSXETG00000000703	brix1	100	73.487	ENSDORG00000009369	Brix1	98	73.487	Dipodomys_ordii
ENSXETG00000000703	brix1	73	57.028	FBgn0035524	CG11583	69	57.028	Drosophila_melanogaster
ENSXETG00000000703	brix1	99	73.392	ENSETEG00000017842	-	98	73.392	Echinops_telfairi
ENSXETG00000000703	brix1	99	70.725	ENSETEG00000017329	-	98	70.725	Echinops_telfairi
ENSXETG00000000703	brix1	75	70.703	ENSEBUG00000007717	BRIX1	85	66.906	Eptatretus_burgeri
ENSXETG00000000703	brix1	100	73.775	ENSEASG00005014968	BRIX1	98	73.775	Equus_asinus_asinus
ENSXETG00000000703	brix1	100	73.199	ENSECAG00000000377	BRIX1	90	73.775	Equus_caballus
ENSXETG00000000703	brix1	100	64.943	ENSEEUG00000008350	BRIX1	98	64.943	Erinaceus_europaeus
ENSXETG00000000703	brix1	99	72.353	ENSELUG00000009050	bxdc2	95	72.353	Esox_lucius
ENSXETG00000000703	brix1	100	75.287	ENSFCAG00000042465	BRIX1	98	75.287	Felis_catus
ENSXETG00000000703	brix1	96	72.059	ENSFALG00000002106	BRIX1	96	70.739	Ficedula_albicollis
ENSXETG00000000703	brix1	100	73.487	ENSFDAG00000018960	BRIX1	98	73.487	Fukomys_damarensis
ENSXETG00000000703	brix1	99	73.410	ENSFHEG00000004488	bxdc2	99	73.410	Fundulus_heteroclitus
ENSXETG00000000703	brix1	84	77.352	ENSGMOG00000002425	bxdc2	99	77.352	Gadus_morhua
ENSXETG00000000703	brix1	96	76.205	ENSGALG00000003373	BRIX1	99	74.709	Gallus_gallus
ENSXETG00000000703	brix1	94	73.538	ENSGAFG00000011947	bxdc2	99	72.965	Gambusia_affinis
ENSXETG00000000703	brix1	99	69.501	ENSGACG00000016491	bxdc2	100	69.501	Gasterosteus_aculeatus
ENSXETG00000000703	brix1	92	76.656	ENSGAGG00000011959	BRIX1	98	73.547	Gopherus_agassizii
ENSXETG00000000703	brix1	100	74.640	ENSGGOG00000004225	BRIX1	98	74.928	Gorilla_gorilla
ENSXETG00000000703	brix1	99	71.930	ENSHBUG00000017923	bxdc2	99	71.930	Haplochromis_burtoni
ENSXETG00000000703	brix1	94	62.883	ENSHGLG00000000296	-	98	61.383	Heterocephalus_glaber_female
ENSXETG00000000703	brix1	100	58.213	ENSHGLG00000002055	-	98	58.213	Heterocephalus_glaber_female
ENSXETG00000000703	brix1	91	63.344	ENSHGLG00000017782	-	90	63.344	Heterocephalus_glaber_female
ENSXETG00000000703	brix1	100	74.928	ENSHGLG00000004566	BRIX1	98	74.928	Heterocephalus_glaber_female
ENSXETG00000000703	brix1	99	56.716	ENSHGLG00000010349	-	99	56.716	Heterocephalus_glaber_female
ENSXETG00000000703	brix1	95	63.830	ENSHGLG00100000909	-	81	62.791	Heterocephalus_glaber_male
ENSXETG00000000703	brix1	99	69.706	ENSHGLG00100000068	-	96	69.706	Heterocephalus_glaber_male
ENSXETG00000000703	brix1	100	75.504	ENSHGLG00100002204	-	98	75.504	Heterocephalus_glaber_male
ENSXETG00000000703	brix1	91	60.000	ENSHGLG00100001527	-	98	57.803	Heterocephalus_glaber_male
ENSXETG00000000703	brix1	99	71.429	ENSHCOG00000011674	bxdc2	99	72.595	Hippocampus_comes
ENSXETG00000000703	brix1	96	70.909	ENSIPUG00000015099	brix1	95	70.909	Ictalurus_punctatus
ENSXETG00000000703	brix1	98	73.900	ENSSTOG00000009600	BRIX1	97	73.900	Ictidomys_tridecemlineatus
ENSXETG00000000703	brix1	100	62.865	ENSJJAG00000009708	-	98	62.865	Jaculus_jaculus
ENSXETG00000000703	brix1	99	66.087	ENSJJAG00000004662	-	98	66.087	Jaculus_jaculus
ENSXETG00000000703	brix1	100	66.476	ENSJJAG00000001423	-	98	66.476	Jaculus_jaculus
ENSXETG00000000703	brix1	76	78.868	ENSJJAG00000001806	-	100	78.868	Jaculus_jaculus
ENSXETG00000000703	brix1	93	73.750	ENSKMAG00000014487	bxdc2	99	72.303	Kryptolebias_marmoratus
ENSXETG00000000703	brix1	99	70.000	ENSLBEG00000018123	bxdc2	100	70.349	Labrus_bergylta
ENSXETG00000000703	brix1	99	71.848	ENSLACG00000005971	BRIX1	99	72.727	Latimeria_chalumnae
ENSXETG00000000703	brix1	99	71.884	ENSLOCG00000011774	bxdc2	99	72.754	Lepisosteus_oculatus
ENSXETG00000000703	brix1	100	73.851	ENSLAFG00000007249	BRIX1	98	73.851	Loxodonta_africana
ENSXETG00000000703	brix1	100	74.928	ENSMFAG00000033107	BRIX1	98	75.216	Macaca_fascicularis
ENSXETG00000000703	brix1	100	74.928	ENSMMUG00000038794	BRIX1	98	75.216	Macaca_mulatta
ENSXETG00000000703	brix1	100	74.928	ENSMNEG00000039324	BRIX1	98	75.358	Macaca_nemestrina
ENSXETG00000000703	brix1	100	74.928	ENSMLEG00000041564	BRIX1	98	75.216	Mandrillus_leucophaeus
ENSXETG00000000703	brix1	99	73.314	ENSMAMG00000015004	bxdc2	99	73.314	Mastacembelus_armatus
ENSXETG00000000703	brix1	99	72.222	ENSMZEG00005019808	bxdc2	99	72.222	Maylandia_zebra
ENSXETG00000000703	brix1	56	74.074	ENSMGAG00000003156	BRIX1	98	71.642	Meleagris_gallopavo
ENSXETG00000000703	brix1	86	79.932	ENSMAUG00000014172	Brix1	98	79.932	Mesocricetus_auratus
ENSXETG00000000703	brix1	100	73.429	ENSMICG00000005672	BRIX1	98	73.429	Microcebus_murinus
ENSXETG00000000703	brix1	100	72.911	ENSMOCG00000018798	Brix1	98	72.911	Microtus_ochrogaster
ENSXETG00000000703	brix1	99	72.647	ENSMMOG00000000861	bxdc2	100	73.021	Mola_mola
ENSXETG00000000703	brix1	94	74.006	ENSMODG00000020386	BRIX1	98	72.046	Monodelphis_domestica
ENSXETG00000000703	brix1	99	65.407	ENSMALG00000020437	bxdc2	99	65.407	Monopterus_albus
ENSXETG00000000703	brix1	100	73.199	MGP_CAROLIEiJ_G0019665	Brix1	98	73.199	Mus_caroli
ENSXETG00000000703	brix1	100	72.911	ENSMUSG00000022247	Brix1	98	72.911	Mus_musculus
ENSXETG00000000703	brix1	100	72.911	MGP_SPRETEiJ_G0020562	Brix1	98	72.911	Mus_spretus
ENSXETG00000000703	brix1	100	74.928	ENSMPUG00000015137	BRIX1	98	74.928	Mustela_putorius_furo
ENSXETG00000000703	brix1	76	79.924	ENSMLUG00000029255	BRIX1	100	81.439	Myotis_lucifugus
ENSXETG00000000703	brix1	99	72.543	ENSNGAG00000002585	-	100	72.543	Nannospalax_galili
ENSXETG00000000703	brix1	100	72.622	ENSNGAG00000021812	-	98	72.622	Nannospalax_galili
ENSXETG00000000703	brix1	99	71.930	ENSNBRG00000008850	bxdc2	95	71.930	Neolamprologus_brichardi
ENSXETG00000000703	brix1	100	70.774	ENSNLEG00000032149	BRIX1	98	71.060	Nomascus_leucogenys
ENSXETG00000000703	brix1	71	77.593	ENSMEUG00000016482	BRIX1	98	59.654	Notamacropus_eugenii
ENSXETG00000000703	brix1	59	86.567	ENSOPRG00000012886	BRIX1	100	86.567	Ochotona_princeps
ENSXETG00000000703	brix1	78	70.833	ENSODEG00000010997	-	98	61.272	Octodon_degus
ENSXETG00000000703	brix1	84	78.425	ENSODEG00000019171	-	100	78.425	Octodon_degus
ENSXETG00000000703	brix1	72	61.224	ENSODEG00000002389	-	78	61.224	Octodon_degus
ENSXETG00000000703	brix1	99	72.515	ENSONIG00000007725	bxdc2	98	72.515	Oreochromis_niloticus
ENSXETG00000000703	brix1	81	81.884	ENSOANG00000014525	-	99	79.054	Ornithorhynchus_anatinus
ENSXETG00000000703	brix1	100	73.143	ENSOCUG00000014478	BRIX1	98	74.063	Oryctolagus_cuniculus
ENSXETG00000000703	brix1	99	73.077	ENSORLG00000005895	bxdc2	99	73.077	Oryzias_latipes
ENSXETG00000000703	brix1	99	73.077	ENSORLG00020005201	bxdc2	99	73.077	Oryzias_latipes_hni
ENSXETG00000000703	brix1	99	72.781	ENSORLG00015011685	bxdc2	99	72.781	Oryzias_latipes_hsok
ENSXETG00000000703	brix1	99	73.373	ENSOMEG00000007680	bxdc2	99	73.373	Oryzias_melastigma
ENSXETG00000000703	brix1	100	73.199	ENSOGAG00000014827	BRIX1	98	73.487	Otolemur_garnettii
ENSXETG00000000703	brix1	100	74.352	ENSOARG00000011539	BRIX1	98	74.352	Ovis_aries
ENSXETG00000000703	brix1	100	74.640	ENSPPAG00000038183	BRIX1	98	74.928	Pan_paniscus
ENSXETG00000000703	brix1	100	75.000	ENSPPRG00000023961	BRIX1	98	75.000	Panthera_pardus
ENSXETG00000000703	brix1	100	75.287	ENSPTIG00000006466	BRIX1	98	75.287	Panthera_tigris_altaica
ENSXETG00000000703	brix1	100	74.640	ENSPTRG00000016784	BRIX1	98	74.928	Pan_troglodytes
ENSXETG00000000703	brix1	99	74.855	ENSPANG00000016504	BRIX1	97	75.145	Papio_anubis
ENSXETG00000000703	brix1	100	69.679	ENSPKIG00000005920	bxdc2	85	70.262	Paramormyrops_kingsleyae
ENSXETG00000000703	brix1	79	77.695	ENSPSIG00000011219	BRIX1	98	77.695	Pelodiscus_sinensis
ENSXETG00000000703	brix1	99	65.982	ENSPMGG00000022988	bxdc2	99	65.988	Periophthalmus_magnuspinnatus
ENSXETG00000000703	brix1	100	71.758	ENSPEMG00000016920	Brix1	98	71.758	Peromyscus_maniculatus_bairdii
ENSXETG00000000703	brix1	99	73.775	ENSPCIG00000022778	BRIX1	98	74.063	Phascolarctos_cinereus
ENSXETG00000000703	brix1	99	72.965	ENSPFOG00000008577	bxdc2	82	72.965	Poecilia_formosa
ENSXETG00000000703	brix1	99	72.965	ENSPLAG00000006772	bxdc2	91	72.965	Poecilia_latipinna
ENSXETG00000000703	brix1	99	72.965	ENSPMEG00000020229	bxdc2	91	72.965	Poecilia_mexicana
ENSXETG00000000703	brix1	99	72.965	ENSPREG00000017461	bxdc2	91	72.965	Poecilia_reticulata
ENSXETG00000000703	brix1	100	71.182	ENSPPYG00000015390	BRIX1	98	71.470	Pongo_abelii
ENSXETG00000000703	brix1	53	75.936	ENSPCAG00000005158	-	100	75.936	Procavia_capensis
ENSXETG00000000703	brix1	88	60.403	ENSPCOG00000016748	-	91	58.654	Propithecus_coquereli
ENSXETG00000000703	brix1	100	73.775	ENSPCOG00000018281	-	98	73.487	Propithecus_coquereli
ENSXETG00000000703	brix1	86	76.190	ENSPVAG00000016925	BRIX1	98	76.190	Pteropus_vampyrus
ENSXETG00000000703	brix1	99	72.222	ENSPNYG00000007707	bxdc2	99	72.222	Pundamilia_nyererei
ENSXETG00000000703	brix1	94	72.531	ENSPNAG00000010431	bxdc2	98	69.565	Pygocentrus_nattereri
ENSXETG00000000703	brix1	100	73.410	ENSRNOG00000018021	Brix1	98	73.410	Rattus_norvegicus
ENSXETG00000000703	brix1	100	74.640	ENSRBIG00000042083	BRIX1	97	74.928	Rhinopithecus_bieti
ENSXETG00000000703	brix1	100	74.928	ENSRROG00000031228	BRIX1	97	75.216	Rhinopithecus_roxellana
ENSXETG00000000703	brix1	73	49.231	YOL077C	-	89	49.231	Saccharomyces_cerevisiae
ENSXETG00000000703	brix1	100	75.216	ENSSBOG00000033290	-	98	75.216	Saimiri_boliviensis_boliviensis
ENSXETG00000000703	brix1	100	73.487	ENSSBOG00000017845	-	98	73.487	Saimiri_boliviensis_boliviensis
ENSXETG00000000703	brix1	94	74.622	ENSSHAG00000010794	BRIX1	96	73.699	Sarcophilus_harrisii
ENSXETG00000000703	brix1	93	74.688	ENSSFOG00015022435	brix1	99	72.807	Scleropages_formosus
ENSXETG00000000703	brix1	98	70.920	ENSSMAG00000005909	bxdc2	99	72.353	Scophthalmus_maximus
ENSXETG00000000703	brix1	99	74.636	ENSSDUG00000016234	bxdc2	99	74.636	Seriola_dumerili
ENSXETG00000000703	brix1	99	74.052	ENSSLDG00000007044	bxdc2	99	74.493	Seriola_lalandi_dorsalis
ENSXETG00000000703	brix1	88	78.073	ENSSARG00000009879	BRIX1	98	71.388	Sorex_araneus
ENSXETG00000000703	brix1	86	80.546	ENSSPUG00000019166	-	98	80.546	Sphenodon_punctatus
ENSXETG00000000703	brix1	100	72.059	ENSSPUG00000000011	-	98	72.059	Sphenodon_punctatus
ENSXETG00000000703	brix1	99	73.977	ENSSPAG00000006309	bxdc2	99	73.977	Stegastes_partitus
ENSXETG00000000703	brix1	100	74.352	ENSSSCG00000016827	BRIX1	97	75.216	Sus_scrofa
ENSXETG00000000703	brix1	96	73.574	ENSTGUG00000001961	BRIX1	98	72.174	Taeniopygia_guttata
ENSXETG00000000703	brix1	99	72.727	ENSTRUG00000011403	bxdc2	100	72.727	Takifugu_rubripes
ENSXETG00000000703	brix1	99	72.941	ENSTNIG00000007517	bxdc2	98	72.674	Tetraodon_nigroviridis
ENSXETG00000000703	brix1	86	76.190	ENSTBEG00000011652	BRIX1	98	76.190	Tupaia_belangeri
ENSXETG00000000703	brix1	100	73.066	ENSTTRG00000003262	BRIX1	98	73.066	Tursiops_truncatus
ENSXETG00000000703	brix1	100	63.248	ENSUAMG00000022481	BRIX1	98	63.037	Ursus_americanus
ENSXETG00000000703	brix1	100	75.287	ENSUMAG00000012900	BRIX1	98	75.287	Ursus_maritimus
ENSXETG00000000703	brix1	63	79.186	ENSVPAG00000010128	BRIX1	63	79.186	Vicugna_pacos
ENSXETG00000000703	brix1	100	65.714	ENSVVUG00000022099	BRIX1	98	67.147	Vulpes_vulpes
ENSXETG00000000703	brix1	99	72.674	ENSXCOG00000002461	bxdc2	99	72.674	Xiphophorus_couchianus
ENSXETG00000000703	brix1	99	72.965	ENSXMAG00000004284	bxdc2	86	72.965	Xiphophorus_maculatus