EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000001108 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: -
Full Name: polymerase (RNA) II (DNA directed) polypeptide J%2C 13.3kDa
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5886 bases
Position: chrGL172728.1:2935954-2941839
Accession: XB-GENE-972012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000002439	RNA_pol_L_2	PF13656.6	5.8e-29	1	1
ENSXETP00000002439	RNA_pol_L	PF01193.24	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000002439	-	522	-	ENSXETP00000002439	117 (aa)	-	Q28CA5

Gene Model

Click here to download ENSXETG00000001108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001108	polr2j	91	96.262	ENSG00000228049	POLR2J2	94	93.578	Homo_sapiens
ENSXETG00000001108	polr2j	100	98.291	ENSG00000005075	POLR2J	100	98.291	Homo_sapiens
ENSXETG00000001108	polr2j	100	94.017	ENSAPOG00000019538	polr2j	100	94.017	Acanthochromis_polyacanthus
ENSXETG00000001108	polr2j	100	90.551	ENSAMEG00000015480	-	100	90.551	Ailuropoda_melanoleuca
ENSXETG00000001108	polr2j	93	70.909	ENSACIG00000014549	POLR2J2	91	70.909	Amphilophus_citrinellus
ENSXETG00000001108	polr2j	100	93.162	ENSAOCG00000006937	polr2j	100	93.162	Amphiprion_ocellaris
ENSXETG00000001108	polr2j	100	94.017	ENSAPEG00000021761	polr2j	100	94.017	Amphiprion_percula
ENSXETG00000001108	polr2j	100	94.017	ENSATEG00000013312	-	100	94.017	Anabas_testudineus
ENSXETG00000001108	polr2j	100	94.017	ENSATEG00000009731	polr2j	100	94.017	Anabas_testudineus
ENSXETG00000001108	polr2j	86	96.040	ENSAPLG00000003744	-	100	96.040	Anas_platyrhynchos
ENSXETG00000001108	polr2j	100	88.889	ENSACAG00000000251	POLR2J	100	88.889	Anolis_carolinensis
ENSXETG00000001108	polr2j	100	94.017	ENSACLG00000014564	polr2j	100	94.017	Astatotilapia_calliptera
ENSXETG00000001108	polr2j	100	96.581	ENSAMXG00000007517	polr2j	100	96.581	Astyanax_mexicanus
ENSXETG00000001108	polr2j	62	65.753	ENSBTAG00000048046	-	61	65.753	Bos_taurus
ENSXETG00000001108	polr2j	94	69.091	WBGene00012187	rpb-11	89	69.091	Caenorhabditis_elegans
ENSXETG00000001108	polr2j	100	98.291	ENSCJAG00000016203	-	100	98.291	Callithrix_jacchus
ENSXETG00000001108	polr2j	100	98.291	ENSCAFG00000013683	-	100	98.291	Canis_familiaris
ENSXETG00000001108	polr2j	85	97.980	ENSTSYG00000029243	-	85	97.980	Carlito_syrichta
ENSXETG00000001108	polr2j	100	98.291	ENSCPOG00000001401	-	100	98.291	Cavia_porcellus
ENSXETG00000001108	polr2j	100	74.359	ENSCATG00000016595	-	97	84.783	Cercocebus_atys
ENSXETG00000001108	polr2j	100	98.291	ENSCLAG00000005238	-	100	98.291	Chinchilla_lanigera
ENSXETG00000001108	polr2j	100	98.291	ENSCSAG00000018092	-	100	98.291	Chlorocebus_sabaeus
ENSXETG00000001108	polr2j	100	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSXETG00000001108	polr2j	100	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSXETG00000001108	polr2j	100	98.291	ENSCGRG00001012814	Polr2j	100	98.291	Cricetulus_griseus_chok1gshd
ENSXETG00000001108	polr2j	100	82.906	ENSCGRG00000008433	Polr2j	100	82.906	Cricetulus_griseus_crigri
ENSXETG00000001108	polr2j	100	94.017	ENSCSEG00000020352	polr2j	100	94.017	Cynoglossus_semilaevis
ENSXETG00000001108	polr2j	100	93.162	ENSCVAG00000014267	polr2j	100	93.162	Cyprinodon_variegatus
ENSXETG00000001108	polr2j	100	95.726	ENSDARG00000035146	polr2j	100	95.726	Danio_rerio
ENSXETG00000001108	polr2j	100	98.291	ENSDORG00000005934	Polr2j	100	98.291	Dipodomys_ordii
ENSXETG00000001108	polr2j	98	77.391	FBgn0032634	Rpb11	98	77.391	Drosophila_melanogaster
ENSXETG00000001108	polr2j	100	64.103	ENSEBUG00000016100	polr2j	100	64.103	Eptatretus_burgeri
ENSXETG00000001108	polr2j	100	98.291	ENSEASG00005016864	-	100	98.291	Equus_asinus_asinus
ENSXETG00000001108	polr2j	100	94.872	ENSELUG00000012822	polr2j	100	94.872	Esox_lucius
ENSXETG00000001108	polr2j	100	98.291	ENSFCAG00000000377	-	100	98.291	Felis_catus
ENSXETG00000001108	polr2j	100	98.291	ENSFALG00000009523	POLR2J	100	98.291	Ficedula_albicollis
ENSXETG00000001108	polr2j	100	98.291	ENSFDAG00000010507	-	100	98.291	Fukomys_damarensis
ENSXETG00000001108	polr2j	100	94.017	ENSFHEG00000006625	polr2j	100	94.017	Fundulus_heteroclitus
ENSXETG00000001108	polr2j	100	94.872	ENSGMOG00000018207	polr2j	100	94.872	Gadus_morhua
ENSXETG00000001108	polr2j	100	98.291	ENSGALG00000030808	-	100	98.291	Gallus_gallus
ENSXETG00000001108	polr2j	100	94.017	ENSGAFG00000019555	polr2j	100	94.017	Gambusia_affinis
ENSXETG00000001108	polr2j	100	94.017	ENSGACG00000003310	polr2j	100	94.017	Gasterosteus_aculeatus
ENSXETG00000001108	polr2j	97	88.496	ENSGAGG00000018304	-	96	88.496	Gopherus_agassizii
ENSXETG00000001108	polr2j	85	93.000	ENSGGOG00000004519	-	80	93.000	Gorilla_gorilla
ENSXETG00000001108	polr2j	100	94.017	ENSHBUG00000008467	polr2j	100	94.017	Haplochromis_burtoni
ENSXETG00000001108	polr2j	100	98.291	ENSHGLG00000013598	POLR2J	100	98.291	Heterocephalus_glaber_female
ENSXETG00000001108	polr2j	100	98.291	ENSHGLG00100011242	POLR2J	100	98.291	Heterocephalus_glaber_male
ENSXETG00000001108	polr2j	100	94.872	ENSHCOG00000014827	polr2j	68	94.872	Hippocampus_comes
ENSXETG00000001108	polr2j	100	96.581	ENSIPUG00000023960	polr2j	100	96.581	Ictalurus_punctatus
ENSXETG00000001108	polr2j	100	98.291	ENSSTOG00000006377	POLR2J	100	98.291	Ictidomys_tridecemlineatus
ENSXETG00000001108	polr2j	100	98.291	ENSJJAG00000013854	-	100	98.291	Jaculus_jaculus
ENSXETG00000001108	polr2j	100	93.162	ENSJJAG00000018834	-	100	93.162	Jaculus_jaculus
ENSXETG00000001108	polr2j	100	94.017	ENSKMAG00000014581	polr2j	79	94.017	Kryptolebias_marmoratus
ENSXETG00000001108	polr2j	100	94.872	ENSLBEG00000005885	polr2j	100	94.872	Labrus_bergylta
ENSXETG00000001108	polr2j	100	96.581	ENSLOCG00000001885	polr2j	89	96.581	Lepisosteus_oculatus
ENSXETG00000001108	polr2j	100	98.291	ENSLAFG00000021507	-	100	98.291	Loxodonta_africana
ENSXETG00000001108	polr2j	100	88.462	ENSMMUG00000012019	POLR2J	100	88.462	Macaca_mulatta
ENSXETG00000001108	polr2j	100	94.872	ENSMAMG00000009374	polr2j	100	94.872	Mastacembelus_armatus
ENSXETG00000001108	polr2j	100	94.017	ENSMZEG00005011932	polr2j	100	94.017	Maylandia_zebra
ENSXETG00000001108	polr2j	100	98.291	ENSMGAG00000003534	POLR2J	100	98.291	Meleagris_gallopavo
ENSXETG00000001108	polr2j	100	98.291	ENSMAUG00000013049	Polr2j	100	98.291	Mesocricetus_auratus
ENSXETG00000001108	polr2j	80	93.617	ENSMICG00000026811	-	94	93.617	Microcebus_murinus
ENSXETG00000001108	polr2j	100	98.291	ENSMOCG00000001294	Polr2j	100	98.291	Microtus_ochrogaster
ENSXETG00000001108	polr2j	100	94.017	ENSMMOG00000013265	polr2j	100	94.017	Mola_mola
ENSXETG00000001108	polr2j	100	89.844	ENSMODG00000013617	-	100	89.844	Monodelphis_domestica
ENSXETG00000001108	polr2j	100	94.872	ENSMALG00000020749	polr2j	100	94.872	Monopterus_albus
ENSXETG00000001108	polr2j	100	98.291	MGP_CAROLIEiJ_G0027851	Polr2j	100	98.291	Mus_caroli
ENSXETG00000001108	polr2j	100	98.291	ENSMUSG00000039771	Polr2j	100	98.291	Mus_musculus
ENSXETG00000001108	polr2j	100	98.291	MGP_PahariEiJ_G0024434	Polr2j	100	98.291	Mus_pahari
ENSXETG00000001108	polr2j	100	98.291	MGP_SPRETEiJ_G0028853	Polr2j	100	98.291	Mus_spretus
ENSXETG00000001108	polr2j	100	98.291	ENSMLUG00000010467	POLR2J	100	98.291	Myotis_lucifugus
ENSXETG00000001108	polr2j	100	98.291	ENSNGAG00000023412	Polr2j	100	98.291	Nannospalax_galili
ENSXETG00000001108	polr2j	66	89.610	ENSNBRG00000006580	polr2j	59	89.610	Neolamprologus_brichardi
ENSXETG00000001108	polr2j	100	76.068	ENSODEG00000008559	-	100	76.068	Octodon_degus
ENSXETG00000001108	polr2j	100	98.291	ENSODEG00000015648	-	100	98.291	Octodon_degus
ENSXETG00000001108	polr2j	100	94.017	ENSONIG00000000259	polr2j	100	94.017	Oreochromis_niloticus
ENSXETG00000001108	polr2j	100	95.726	ENSOANG00000020912	POLR2J	100	95.726	Ornithorhynchus_anatinus
ENSXETG00000001108	polr2j	100	90.551	ENSOCUG00000023609	POLR2J	100	90.551	Oryctolagus_cuniculus
ENSXETG00000001108	polr2j	100	94.017	ENSORLG00000029046	polr2j	83	94.017	Oryzias_latipes
ENSXETG00000001108	polr2j	100	94.017	ENSORLG00020007625	polr2j	83	94.017	Oryzias_latipes_hni
ENSXETG00000001108	polr2j	100	94.017	ENSORLG00015003457	polr2j	83	94.017	Oryzias_latipes_hsok
ENSXETG00000001108	polr2j	100	93.162	ENSOMEG00000002097	polr2j	100	93.162	Oryzias_melastigma
ENSXETG00000001108	polr2j	100	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSXETG00000001108	polr2j	100	98.291	ENSOARG00000014204	-	98	98.291	Ovis_aries
ENSXETG00000001108	polr2j	100	98.291	ENSPPRG00000012439	-	100	98.291	Panthera_pardus
ENSXETG00000001108	polr2j	97	89.474	ENSPTIG00000018714	-	100	95.146	Panthera_tigris_altaica
ENSXETG00000001108	polr2j	85	97.000	ENSPSIG00000010173	-	100	97.000	Pelodiscus_sinensis
ENSXETG00000001108	polr2j	100	94.017	ENSPMGG00000021256	polr2j	100	94.017	Periophthalmus_magnuspinnatus
ENSXETG00000001108	polr2j	100	98.291	ENSPEMG00000015733	Polr2j	100	98.291	Peromyscus_maniculatus_bairdii
ENSXETG00000001108	polr2j	100	98.291	ENSPCIG00000009026	-	100	98.291	Phascolarctos_cinereus
ENSXETG00000001108	polr2j	100	94.017	ENSPFOG00000012001	polr2j	99	94.017	Poecilia_formosa
ENSXETG00000001108	polr2j	100	94.017	ENSPLAG00000014075	polr2j	100	94.017	Poecilia_latipinna
ENSXETG00000001108	polr2j	100	94.017	ENSPMEG00000020585	polr2j	100	94.017	Poecilia_mexicana
ENSXETG00000001108	polr2j	100	94.017	ENSPREG00000015255	polr2j	100	94.017	Poecilia_reticulata
ENSXETG00000001108	polr2j	100	98.291	ENSPCOG00000024573	-	100	98.291	Propithecus_coquereli
ENSXETG00000001108	polr2j	99	92.241	ENSPVAG00000017770	-	66	92.241	Pteropus_vampyrus
ENSXETG00000001108	polr2j	100	94.017	ENSPNYG00000014832	polr2j	100	94.017	Pundamilia_nyererei
ENSXETG00000001108	polr2j	100	94.017	ENSPNAG00000016595	polr2j	100	94.017	Pygocentrus_nattereri
ENSXETG00000001108	polr2j	100	98.291	ENSRNOG00000001430	Polr2j	100	98.291	Rattus_norvegicus
ENSXETG00000001108	polr2j	100	98.291	ENSSBOG00000025579	-	100	98.291	Saimiri_boliviensis_boliviensis
ENSXETG00000001108	polr2j	59	100.000	ENSSHAG00000010443	-	81	100.000	Sarcophilus_harrisii
ENSXETG00000001108	polr2j	93	93.578	ENSSFOG00015003371	polr2j	83	93.578	Scleropages_formosus
ENSXETG00000001108	polr2j	100	94.017	ENSSMAG00000006729	polr2j	100	94.017	Scophthalmus_maximus
ENSXETG00000001108	polr2j	100	94.017	ENSSDUG00000018490	polr2j	100	94.017	Seriola_dumerili
ENSXETG00000001108	polr2j	100	94.017	ENSSLDG00000022354	polr2j	100	94.017	Seriola_lalandi_dorsalis
ENSXETG00000001108	polr2j	100	98.291	ENSSPUG00000010802	-	100	98.291	Sphenodon_punctatus
ENSXETG00000001108	polr2j	100	94.017	ENSSPAG00000021953	polr2j	100	94.017	Stegastes_partitus
ENSXETG00000001108	polr2j	100	98.291	ENSSSCG00000007688	-	100	98.291	Sus_scrofa
ENSXETG00000001108	polr2j	100	82.051	ENSSSCG00000003703	-	83	82.051	Sus_scrofa
ENSXETG00000001108	polr2j	59	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSXETG00000001108	polr2j	85	97.000	ENSTGUG00000004501	-	100	97.000	Taeniopygia_guttata
ENSXETG00000001108	polr2j	100	94.017	ENSTRUG00000020842	polr2j	100	94.017	Takifugu_rubripes
ENSXETG00000001108	polr2j	100	93.162	ENSTNIG00000002994	polr2j	100	93.162	Tetraodon_nigroviridis
ENSXETG00000001108	polr2j	91	81.308	ENSTBEG00000005797	-	70	81.308	Tupaia_belangeri
ENSXETG00000001108	polr2j	100	98.291	ENSUAMG00000011310	-	100	98.291	Ursus_americanus
ENSXETG00000001108	polr2j	100	98.291	ENSUMAG00000012594	-	100	98.291	Ursus_maritimus
ENSXETG00000001108	polr2j	100	94.017	ENSXMAG00000012422	polr2j	100	94.017	Xiphophorus_maculatus