EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000001212 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: -
Full Name: Xenopus tropicalis uncharacterized protein mgc146443 (MGC146443)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 17939 bases
Position: chrGL172761.1:2439558-2457496
Accession: NM_001078886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000002605	RNase_H	PF00075.24	5.8e-43	1	1
ENSXETP00000061828	RNase_H	PF00075.24	6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061145	-	1134	-	ENSXETP00000061828	204 (aa)	XP_012818597	Q0V9P2
ENSXETT00000002605	-	1298	-	ENSXETP00000002605	294 (aa)	-	F7BUX9

Gene Model

Click here to download ENSXETG00000001212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000001212	rnaseh1	100	88.235	ENSXETG00000030371	-	100	88.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001212	rnaseh1	91	55.056	ENSG00000171865	RNASEH1	90	55.056	Homo_sapiens
ENSXETG00000001212	rnaseh1	100	52.862	ENSAPOG00000000412	rnaseh1	97	52.862	Acanthochromis_polyacanthus
ENSXETG00000001212	rnaseh1	91	55.926	ENSAMEG00000018433	RNASEH1	90	55.926	Ailuropoda_melanoleuca
ENSXETG00000001212	rnaseh1	100	53.199	ENSACIG00000014666	rnaseh1	96	53.199	Amphilophus_citrinellus
ENSXETG00000001212	rnaseh1	100	52.525	ENSAOCG00000015210	rnaseh1	97	53.691	Amphiprion_ocellaris
ENSXETG00000001212	rnaseh1	100	53.535	ENSAPEG00000014104	rnaseh1	97	54.698	Amphiprion_percula
ENSXETG00000001212	rnaseh1	100	54.362	ENSATEG00000000598	rnaseh1	94	56.506	Anabas_testudineus
ENSXETG00000001212	rnaseh1	87	49.434	ENSAPLG00000001961	RNASEH1	100	49.434	Anas_platyrhynchos
ENSXETG00000001212	rnaseh1	100	59.615	ENSACAG00000016857	rnaseh1	91	49.153	Anolis_carolinensis
ENSXETG00000001212	rnaseh1	91	56.180	ENSANAG00000024055	RNASEH1	90	56.180	Aotus_nancymaae
ENSXETG00000001212	rnaseh1	99	53.642	ENSACLG00000006741	rnaseh1	96	51.485	Astatotilapia_calliptera
ENSXETG00000001212	rnaseh1	99	46.918	ENSAMXG00000042940	rnaseh1	98	46.918	Astyanax_mexicanus
ENSXETG00000001212	rnaseh1	100	57.627	ENSBTAG00000016235	RNASEH1	96	55.282	Bos_taurus
ENSXETG00000001212	rnaseh1	99	33.891	WBGene00004382	rnh-1.0	96	37.173	Caenorhabditis_elegans
ENSXETG00000001212	rnaseh1	91	55.147	ENSCJAG00000035450	RNASEH1	90	55.147	Callithrix_jacchus
ENSXETG00000001212	rnaseh1	95	54.804	ENSCAFG00000003259	RNASEH1	93	54.804	Canis_familiaris
ENSXETG00000001212	rnaseh1	74	56.954	ENSCAFG00020004994	RNASEH1	97	67.550	Canis_lupus_dingo
ENSXETG00000001212	rnaseh1	91	55.390	ENSCHIG00000022264	-	90	55.390	Capra_hircus
ENSXETG00000001212	rnaseh1	83	44.000	ENSCHIG00000022230	-	99	44.000	Capra_hircus
ENSXETG00000001212	rnaseh1	91	57.249	ENSTSYG00000012926	RNASEH1	90	57.249	Carlito_syrichta
ENSXETG00000001212	rnaseh1	85	54.400	ENSCAPG00000004813	RNASEH1	98	53.386	Cavia_aperea
ENSXETG00000001212	rnaseh1	91	55.431	ENSCPOG00000022278	Rnaseh1	87	54.478	Cavia_porcellus
ENSXETG00000001212	rnaseh1	91	56.250	ENSCCAG00000038017	RNASEH1	90	56.250	Cebus_capucinus
ENSXETG00000001212	rnaseh1	91	56.554	ENSCATG00000016515	-	90	56.554	Cercocebus_atys
ENSXETG00000001212	rnaseh1	100	42.231	ENSCATG00000016818	-	89	50.187	Cercocebus_atys
ENSXETG00000001212	rnaseh1	91	56.554	ENSCLAG00000002440	RNASEH1	90	55.431	Chinchilla_lanigera
ENSXETG00000001212	rnaseh1	91	55.390	ENSCSAG00000006943	RNASEH1	90	54.647	Chlorocebus_sabaeus
ENSXETG00000001212	rnaseh1	74	56.291	ENSCHOG00000008547	RNASEH1	74	68.874	Choloepus_hoffmanni
ENSXETG00000001212	rnaseh1	91	56.250	ENSCPBG00000021620	RNASEH1	99	56.250	Chrysemys_picta_bellii
ENSXETG00000001212	rnaseh1	96	35.959	ENSCING00000014054	-	96	34.589	Ciona_intestinalis
ENSXETG00000001212	rnaseh1	79	48.837	ENSCSAVG00000000009	-	96	34.167	Ciona_savignyi
ENSXETG00000001212	rnaseh1	98	53.448	ENSCANG00000037763	RNASEH1	95	53.448	Colobus_angolensis_palliatus
ENSXETG00000001212	rnaseh1	100	46.094	ENSCGRG00001008950	Rnaseh1	90	55.805	Cricetulus_griseus_chok1gshd
ENSXETG00000001212	rnaseh1	100	46.094	ENSCGRG00000006029	Rnaseh1	90	55.805	Cricetulus_griseus_crigri
ENSXETG00000001212	rnaseh1	99	54.305	ENSCSEG00000005741	rnaseh1	95	51.515	Cynoglossus_semilaevis
ENSXETG00000001212	rnaseh1	99	51.656	ENSCVAG00000018717	rnaseh1	93	52.465	Cyprinodon_variegatus
ENSXETG00000001212	rnaseh1	91	52.574	ENSDARG00000042571	rnaseh1	97	53.975	Danio_rerio
ENSXETG00000001212	rnaseh1	91	58.427	ENSDNOG00000016056	RNASEH1	90	56.180	Dasypus_novemcinctus
ENSXETG00000001212	rnaseh1	95	53.571	ENSDORG00000000704	Rnaseh1	94	53.571	Dipodomys_ordii
ENSXETG00000001212	rnaseh1	96	47.183	FBgn0023171	rnh1	92	40.273	Drosophila_melanogaster
ENSXETG00000001212	rnaseh1	91	52.612	ENSETEG00000012674	RNASEH1	89	52.612	Echinops_telfairi
ENSXETG00000001212	rnaseh1	98	40.000	ENSEBUG00000006116	rnaseh1	77	43.233	Eptatretus_burgeri
ENSXETG00000001212	rnaseh1	99	56.291	ENSEBUG00000008898	rnaseh1	98	48.966	Eptatretus_burgeri
ENSXETG00000001212	rnaseh1	100	52.381	ENSEASG00005022200	RNASEH1	97	52.381	Equus_asinus_asinus
ENSXETG00000001212	rnaseh1	100	52.381	ENSECAG00000020695	RNASEH1	97	52.381	Equus_caballus
ENSXETG00000001212	rnaseh1	99	52.632	ENSELUG00000010112	rnaseh1	99	50.502	Esox_lucius
ENSXETG00000001212	rnaseh1	95	55.872	ENSFCAG00000025832	RNASEH1	93	55.872	Felis_catus
ENSXETG00000001212	rnaseh1	96	55.705	ENSFALG00000002069	RNASEH1	95	52.448	Ficedula_albicollis
ENSXETG00000001212	rnaseh1	91	56.134	ENSFDAG00000002035	RNASEH1	79	55.390	Fukomys_damarensis
ENSXETG00000001212	rnaseh1	91	53.358	ENSGMOG00000013818	rnaseh1	89	52.612	Gadus_morhua
ENSXETG00000001212	rnaseh1	100	56.774	ENSGALG00000016389	RNASEH1	99	49.020	Gallus_gallus
ENSXETG00000001212	rnaseh1	97	53.979	ENSGAFG00000001776	rnaseh1	95	54.514	Gambusia_affinis
ENSXETG00000001212	rnaseh1	100	49.832	ENSGACG00000011935	rnaseh1	98	49.832	Gasterosteus_aculeatus
ENSXETG00000001212	rnaseh1	96	60.000	ENSGAGG00000009150	RNASEH1	61	56.618	Gopherus_agassizii
ENSXETG00000001212	rnaseh1	91	55.056	ENSGGOG00000034822	RNASEH1	90	55.056	Gorilla_gorilla
ENSXETG00000001212	rnaseh1	99	52.980	ENSHBUG00000004666	rnaseh1	96	50.831	Haplochromis_burtoni
ENSXETG00000001212	rnaseh1	91	56.506	ENSHGLG00000002585	Rnaseh1	83	54.815	Heterocephalus_glaber_female
ENSXETG00000001212	rnaseh1	91	56.506	ENSHGLG00100005105	Rnaseh1	83	54.815	Heterocephalus_glaber_male
ENSXETG00000001212	rnaseh1	99	54.000	ENSHCOG00000012329	rnaseh1	98	51.815	Hippocampus_comes
ENSXETG00000001212	rnaseh1	91	54.815	ENSIPUG00000023060	rnaseh1	97	54.815	Ictalurus_punctatus
ENSXETG00000001212	rnaseh1	91	58.427	ENSSTOG00000012774	RNASEH1	97	56.028	Ictidomys_tridecemlineatus
ENSXETG00000001212	rnaseh1	82	57.202	ENSJJAG00000020238	Rnaseh1	90	56.790	Jaculus_jaculus
ENSXETG00000001212	rnaseh1	97	38.197	ENSJJAG00000008994	-	89	46.360	Jaculus_jaculus
ENSXETG00000001212	rnaseh1	97	51.379	ENSJJAG00000021481	-	97	51.203	Jaculus_jaculus
ENSXETG00000001212	rnaseh1	95	53.571	ENSKMAG00000001373	rnaseh1	92	53.571	Kryptolebias_marmoratus
ENSXETG00000001212	rnaseh1	95	51.773	ENSLBEG00000004480	rnaseh1	96	52.963	Labrus_bergylta
ENSXETG00000001212	rnaseh1	95	62.791	ENSLACG00000007100	RNASEH1	88	53.763	Latimeria_chalumnae
ENSXETG00000001212	rnaseh1	99	55.814	ENSLOCG00000017212	rnaseh1	97	56.985	Lepisosteus_oculatus
ENSXETG00000001212	rnaseh1	91	55.431	ENSLAFG00000015091	RNASEH1	90	55.431	Loxodonta_africana
ENSXETG00000001212	rnaseh1	100	42.742	ENSMFAG00000002323	-	90	50.936	Macaca_fascicularis
ENSXETG00000001212	rnaseh1	91	56.134	ENSMFAG00000000063	-	90	55.390	Macaca_fascicularis
ENSXETG00000001212	rnaseh1	100	43.548	ENSMMUG00000019280	-	90	51.685	Macaca_mulatta
ENSXETG00000001212	rnaseh1	91	56.134	ENSMNEG00000040183	-	90	55.390	Macaca_nemestrina
ENSXETG00000001212	rnaseh1	100	43.548	ENSMNEG00000029676	-	90	51.685	Macaca_nemestrina
ENSXETG00000001212	rnaseh1	98	52.083	ENSMLEG00000028662	-	97	51.736	Mandrillus_leucophaeus
ENSXETG00000001212	rnaseh1	85	54.762	ENSMLEG00000039352	-	99	54.365	Mandrillus_leucophaeus
ENSXETG00000001212	rnaseh1	99	54.762	ENSMAMG00000019725	rnaseh1	93	57.678	Mastacembelus_armatus
ENSXETG00000001212	rnaseh1	99	53.642	ENSMZEG00005013006	rnaseh1	96	51.485	Maylandia_zebra
ENSXETG00000001212	rnaseh1	74	58.278	ENSMGAG00000013979	RNASEH1	98	51.020	Meleagris_gallopavo
ENSXETG00000001212	rnaseh1	91	55.805	ENSMAUG00000014957	Rnaseh1	90	55.805	Mesocricetus_auratus
ENSXETG00000001212	rnaseh1	95	54.255	ENSMICG00000033156	RNASEH1	94	54.255	Microcebus_murinus
ENSXETG00000001212	rnaseh1	100	58.940	ENSMOCG00000015522	Rnaseh1	90	53.933	Microtus_ochrogaster
ENSXETG00000001212	rnaseh1	99	52.273	ENSMMOG00000015902	rnaseh1	92	51.943	Mola_mola
ENSXETG00000001212	rnaseh1	94	58.545	ENSMODG00000014491	-	92	57.194	Monodelphis_domestica
ENSXETG00000001212	rnaseh1	84	49.799	ENSMODG00000028814	-	96	48.996	Monodelphis_domestica
ENSXETG00000001212	rnaseh1	96	54.770	ENSMALG00000010565	rnaseh1	92	54.138	Monopterus_albus
ENSXETG00000001212	rnaseh1	91	56.929	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	55.056	Mus_caroli
ENSXETG00000001212	rnaseh1	91	56.929	ENSMUSG00000020630	Rnaseh1	90	55.056	Mus_musculus
ENSXETG00000001212	rnaseh1	91	55.805	MGP_PahariEiJ_G0029418	Rnaseh1	90	55.056	Mus_pahari
ENSXETG00000001212	rnaseh1	91	56.929	MGP_SPRETEiJ_G0018502	Rnaseh1	90	55.056	Mus_spretus
ENSXETG00000001212	rnaseh1	75	56.209	ENSMPUG00000012984	RNASEH1	95	59.184	Mustela_putorius_furo
ENSXETG00000001212	rnaseh1	98	52.613	ENSNGAG00000015966	Rnaseh1	89	52.613	Nannospalax_galili
ENSXETG00000001212	rnaseh1	99	52.980	ENSNBRG00000008739	rnaseh1	96	51.815	Neolamprologus_brichardi
ENSXETG00000001212	rnaseh1	91	46.269	ENSNLEG00000015400	RNASEH1	88	46.269	Nomascus_leucogenys
ENSXETG00000001212	rnaseh1	82	52.479	ENSNLEG00000000059	-	87	52.479	Nomascus_leucogenys
ENSXETG00000001212	rnaseh1	100	32.283	ENSMEUG00000003610	-	90	40.449	Notamacropus_eugenii
ENSXETG00000001212	rnaseh1	94	52.364	ENSOPRG00000005072	RNASEH1	92	51.254	Ochotona_princeps
ENSXETG00000001212	rnaseh1	91	56.929	ENSODEG00000000235	Rnaseh1	87	56.929	Octodon_degus
ENSXETG00000001212	rnaseh1	99	51.899	ENSONIG00000018697	rnaseh1	97	54.579	Oreochromis_niloticus
ENSXETG00000001212	rnaseh1	91	55.431	ENSOCUG00000006117	RNASEH1	90	55.431	Oryctolagus_cuniculus
ENSXETG00000001212	rnaseh1	91	54.380	ENSORLG00000018127	rnaseh1	95	54.380	Oryzias_latipes
ENSXETG00000001212	rnaseh1	100	49.667	ENSORLG00020013660	rnaseh1	97	51.000	Oryzias_latipes_hni
ENSXETG00000001212	rnaseh1	100	50.000	ENSORLG00015011338	rnaseh1	97	51.000	Oryzias_latipes_hsok
ENSXETG00000001212	rnaseh1	82	57.438	ENSOMEG00000004710	rnaseh1	89	57.438	Oryzias_melastigma
ENSXETG00000001212	rnaseh1	91	56.180	ENSOGAG00000017176	RNASEH1	90	56.180	Otolemur_garnettii
ENSXETG00000001212	rnaseh1	100	45.151	ENSOARG00000005386	RNASEH1	99	45.151	Ovis_aries
ENSXETG00000001212	rnaseh1	91	55.056	ENSPPAG00000034221	RNASEH1	90	55.056	Pan_paniscus
ENSXETG00000001212	rnaseh1	95	55.872	ENSPPRG00000015513	RNASEH1	93	55.872	Panthera_pardus
ENSXETG00000001212	rnaseh1	85	56.400	ENSPTIG00000019034	RNASEH1	83	56.400	Panthera_tigris_altaica
ENSXETG00000001212	rnaseh1	89	50.382	ENSPTRG00000043403	-	95	50.382	Pan_troglodytes
ENSXETG00000001212	rnaseh1	91	55.056	ENSPTRG00000011614	RNASEH1	90	55.056	Pan_troglodytes
ENSXETG00000001212	rnaseh1	100	41.600	ENSPANG00000018246	-	89	49.064	Papio_anubis
ENSXETG00000001212	rnaseh1	91	56.134	ENSPANG00000000443	RNASEH1	98	54.545	Papio_anubis
ENSXETG00000001212	rnaseh1	91	52.963	ENSPKIG00000003146	rnaseh1	98	52.963	Paramormyrops_kingsleyae
ENSXETG00000001212	rnaseh1	100	60.784	ENSPSIG00000002937	RNASEH1	99	54.779	Pelodiscus_sinensis
ENSXETG00000001212	rnaseh1	99	49.829	ENSPMGG00000017463	rnaseh1	99	49.829	Periophthalmus_magnuspinnatus
ENSXETG00000001212	rnaseh1	100	46.512	ENSPEMG00000022465	-	90	54.275	Peromyscus_maniculatus_bairdii
ENSXETG00000001212	rnaseh1	100	51.701	ENSPCIG00000023334	-	98	51.361	Phascolarctos_cinereus
ENSXETG00000001212	rnaseh1	70	45.833	ENSPCIG00000026047	-	85	44.079	Phascolarctos_cinereus
ENSXETG00000001212	rnaseh1	99	49.677	ENSPFOG00000002841	rnaseh1	90	56.667	Poecilia_formosa
ENSXETG00000001212	rnaseh1	67	51.741	ENSPLAG00000021349	-	75	52.041	Poecilia_latipinna
ENSXETG00000001212	rnaseh1	99	49.677	ENSPMEG00000016826	rnaseh1	90	56.667	Poecilia_mexicana
ENSXETG00000001212	rnaseh1	99	50.323	ENSPREG00000012197	rnaseh1	90	56.364	Poecilia_reticulata
ENSXETG00000001212	rnaseh1	100	46.018	ENSPPYG00000025873	RNASEH1	88	46.018	Pongo_abelii
ENSXETG00000001212	rnaseh1	83	55.510	ENSPPYG00000008067	-	90	55.510	Pongo_abelii
ENSXETG00000001212	rnaseh1	91	54.851	ENSPCAG00000002500	RNASEH1	90	54.851	Procavia_capensis
ENSXETG00000001212	rnaseh1	95	49.645	ENSPCOG00000019444	RNASEH1	94	49.645	Propithecus_coquereli
ENSXETG00000001212	rnaseh1	95	52.128	ENSPVAG00000002070	RNASEH1	92	51.773	Pteropus_vampyrus
ENSXETG00000001212	rnaseh1	99	53.642	ENSPNYG00000001292	rnaseh1	96	51.155	Pundamilia_nyererei
ENSXETG00000001212	rnaseh1	91	55.515	ENSPNAG00000022344	rnaseh1	89	55.515	Pygocentrus_nattereri
ENSXETG00000001212	rnaseh1	100	45.312	ENSRNOG00000008584	Rnaseh1	90	55.056	Rattus_norvegicus
ENSXETG00000001212	rnaseh1	91	56.180	ENSRBIG00000034222	RNASEH1	89	56.180	Rhinopithecus_bieti
ENSXETG00000001212	rnaseh1	91	56.180	ENSRROG00000041761	RNASEH1	89	56.180	Rhinopithecus_roxellana
ENSXETG00000001212	rnaseh1	99	45.455	YMR234W	-	98	42.553	Saccharomyces_cerevisiae
ENSXETG00000001212	rnaseh1	91	56.250	ENSSBOG00000025411	RNASEH1	90	56.250	Saimiri_boliviensis_boliviensis
ENSXETG00000001212	rnaseh1	100	55.102	ENSSHAG00000013051	RNASEH1	97	54.762	Sarcophilus_harrisii
ENSXETG00000001212	rnaseh1	100	51.299	ENSSFOG00015002709	rnaseh1	99	51.299	Scleropages_formosus
ENSXETG00000001212	rnaseh1	100	49.667	ENSSMAG00000007586	rnaseh1	96	49.508	Scophthalmus_maximus
ENSXETG00000001212	rnaseh1	95	52.669	ENSSDUG00000008217	rnaseh1	93	54.104	Seriola_dumerili
ENSXETG00000001212	rnaseh1	84	55.159	ENSSLDG00000000442	rnaseh1	93	54.800	Seriola_lalandi_dorsalis
ENSXETG00000001212	rnaseh1	100	45.865	ENSSPUG00000006644	RNASEH1	92	52.381	Sphenodon_punctatus
ENSXETG00000001212	rnaseh1	100	52.881	ENSSPAG00000009353	rnaseh1	96	52.881	Stegastes_partitus
ENSXETG00000001212	rnaseh1	91	54.444	ENSSSCG00000025305	RNASEH1	99	50.847	Sus_scrofa
ENSXETG00000001212	rnaseh1	100	58.696	ENSTGUG00000012980	RNASEH1	92	51.748	Taeniopygia_guttata
ENSXETG00000001212	rnaseh1	96	56.098	ENSTRUG00000015774	rnaseh1	96	57.299	Takifugu_rubripes
ENSXETG00000001212	rnaseh1	91	56.618	ENSTNIG00000010715	rnaseh1	96	57.249	Tetraodon_nigroviridis
ENSXETG00000001212	rnaseh1	100	51.361	ENSTTRG00000001615	RNASEH1	99	51.361	Tursiops_truncatus
ENSXETG00000001212	rnaseh1	74	55.629	ENSUAMG00000018254	RNASEH1	78	68.212	Ursus_americanus
ENSXETG00000001212	rnaseh1	70	53.846	ENSUMAG00000003941	RNASEH1	65	53.846	Ursus_maritimus
ENSXETG00000001212	rnaseh1	100	44.218	ENSVPAG00000011589	RNASEH1	99	43.878	Vicugna_pacos
ENSXETG00000001212	rnaseh1	95	55.160	ENSVVUG00000008633	RNASEH1	83	55.160	Vulpes_vulpes
ENSXETG00000001212	rnaseh1	97	53.287	ENSXMAG00000002357	rnaseh1	95	53.147	Xiphophorus_maculatus