EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000001447 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: -
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 7435 bases
Position: chrGL172832.1:1459446-1466880
Accession: XB-GENE-877264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000003051	THUMP	PF02926.17	8.7e-12	1	1
ENSXETP00000003051	UPF0020	PF01170.18	2.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000003051	-	2191	-	ENSXETP00000003051	508 (aa)	-	F7C781

Gene Model

Click here to download ENSXETG00000001447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001447	thumpd3	95	59.796	ENSG00000134077	THUMPD3	100	58.537	Homo_sapiens
ENSXETG00000001447	thumpd3	94	59.336	ENSAPOG00000015836	thumpd3	95	59.959	Acanthochromis_polyacanthus
ENSXETG00000001447	thumpd3	95	60.279	ENSAMEG00000011321	THUMPD3	97	59.960	Ailuropoda_melanoleuca
ENSXETG00000001447	thumpd3	91	60.851	ENSACIG00000020096	thumpd3	90	60.851	Amphilophus_citrinellus
ENSXETG00000001447	thumpd3	91	59.787	ENSAOCG00000004399	thumpd3	90	60.000	Amphiprion_ocellaris
ENSXETG00000001447	thumpd3	91	60.768	ENSAPEG00000016740	thumpd3	90	60.768	Amphiprion_percula
ENSXETG00000001447	thumpd3	94	59.175	ENSATEG00000005345	thumpd3	94	58.678	Anabas_testudineus
ENSXETG00000001447	thumpd3	78	63.930	ENSAPLG00000003598	THUMPD3	99	63.504	Anas_platyrhynchos
ENSXETG00000001447	thumpd3	95	60.038	ENSACAG00000014974	THUMPD3	98	59.004	Anolis_carolinensis
ENSXETG00000001447	thumpd3	95	59.592	ENSANAG00000002365	THUMPD3	96	58.871	Aotus_nancymaae
ENSXETG00000001447	thumpd3	94	58.714	ENSACLG00000023333	thumpd3	93	57.669	Astatotilapia_calliptera
ENSXETG00000001447	thumpd3	65	64.286	ENSACLG00000013504	-	73	64.286	Astatotilapia_calliptera
ENSXETG00000001447	thumpd3	91	60.560	ENSAMXG00000015683	thumpd3	94	59.914	Astyanax_mexicanus
ENSXETG00000001447	thumpd3	95	62.195	ENSBTAG00000003112	THUMPD3	97	62.195	Bos_taurus
ENSXETG00000001447	thumpd3	89	36.623	WBGene00010846	M04B2.2	99	36.601	Caenorhabditis_elegans
ENSXETG00000001447	thumpd3	95	59.796	ENSCJAG00000015949	THUMPD3	96	59.796	Callithrix_jacchus
ENSXETG00000001447	thumpd3	95	61.429	ENSCAFG00000005499	THUMPD3	97	60.714	Canis_familiaris
ENSXETG00000001447	thumpd3	76	57.576	ENSCAFG00000008060	-	93	58.897	Canis_familiaris
ENSXETG00000001447	thumpd3	81	60.584	ENSCAFG00020025887	-	93	60.190	Canis_lupus_dingo
ENSXETG00000001447	thumpd3	95	61.429	ENSCAFG00020008895	-	97	60.714	Canis_lupus_dingo
ENSXETG00000001447	thumpd3	95	61.382	ENSCHIG00000024037	THUMPD3	96	60.672	Capra_hircus
ENSXETG00000001447	thumpd3	89	62.144	ENSTSYG00000000159	THUMPD3	97	58.600	Carlito_syrichta
ENSXETG00000001447	thumpd3	87	41.163	ENSCAPG00000017486	THUMPD3	85	41.163	Cavia_aperea
ENSXETG00000001447	thumpd3	99	60.236	ENSCPOG00000033287	THUMPD3	99	60.236	Cavia_porcellus
ENSXETG00000001447	thumpd3	95	52.918	ENSCCAG00000021429	-	99	52.965	Cebus_capucinus
ENSXETG00000001447	thumpd3	95	59.388	ENSCCAG00000027067	-	96	59.063	Cebus_capucinus
ENSXETG00000001447	thumpd3	95	59.229	ENSCATG00000040999	THUMPD3	96	59.229	Cercocebus_atys
ENSXETG00000001447	thumpd3	99	60.236	ENSCLAG00000000690	THUMPD3	99	60.236	Chinchilla_lanigera
ENSXETG00000001447	thumpd3	95	59.229	ENSCSAG00000010753	THUMPD3	96	59.229	Chlorocebus_sabaeus
ENSXETG00000001447	thumpd3	83	50.847	ENSCHOG00000012851	THUMPD3	83	50.847	Choloepus_hoffmanni
ENSXETG00000001447	thumpd3	95	62.500	ENSCPBG00000014771	THUMPD3	98	60.938	Chrysemys_picta_bellii
ENSXETG00000001447	thumpd3	89	39.073	ENSCSAVG00000008668	-	96	39.294	Ciona_savignyi
ENSXETG00000001447	thumpd3	95	59.432	ENSCANG00000031901	THUMPD3	96	59.432	Colobus_angolensis_palliatus
ENSXETG00000001447	thumpd3	95	59.763	ENSCGRG00001024117	Thumpd3	97	59.604	Cricetulus_griseus_chok1gshd
ENSXETG00000001447	thumpd3	95	59.763	ENSCGRG00000018116	Thumpd3	97	59.604	Cricetulus_griseus_crigri
ENSXETG00000001447	thumpd3	93	59.454	ENSCSEG00000002546	thumpd3	94	59.454	Cynoglossus_semilaevis
ENSXETG00000001447	thumpd3	91	58.511	ENSCVAG00000001019	thumpd3	94	56.740	Cyprinodon_variegatus
ENSXETG00000001447	thumpd3	93	60.042	ENSDARG00000059634	thumpd3	97	59.623	Danio_rerio
ENSXETG00000001447	thumpd3	95	61.100	ENSDNOG00000047668	THUMPD3	99	57.045	Dasypus_novemcinctus
ENSXETG00000001447	thumpd3	95	60.843	ENSDORG00000003257	Thumpd3	97	60.843	Dipodomys_ordii
ENSXETG00000001447	thumpd3	66	54.749	ENSETEG00000020239	-	66	56.395	Echinops_telfairi
ENSXETG00000001447	thumpd3	86	52.915	ENSEBUG00000004221	thumpd3	95	52.477	Eptatretus_burgeri
ENSXETG00000001447	thumpd3	95	59.919	ENSEASG00005013327	THUMPD3	97	57.905	Equus_asinus_asinus
ENSXETG00000001447	thumpd3	95	61.943	ENSECAG00000002016	THUMPD3	97	59.881	Equus_caballus
ENSXETG00000001447	thumpd3	95	57.692	ENSEEUG00000014696	THUMPD3	96	57.692	Erinaceus_europaeus
ENSXETG00000001447	thumpd3	55	70.000	ENSELUG00000018246	thumpd3	98	52.717	Esox_lucius
ENSXETG00000001447	thumpd3	95	60.039	ENSFCAG00000006171	THUMPD3	96	61.188	Felis_catus
ENSXETG00000001447	thumpd3	85	60.310	ENSFALG00000013631	THUMPD3	92	59.560	Ficedula_albicollis
ENSXETG00000001447	thumpd3	99	60.588	ENSFDAG00000014825	THUMPD3	99	60.274	Fukomys_damarensis
ENSXETG00000001447	thumpd3	91	59.013	ENSFHEG00000006006	thumpd3	90	59.871	Fundulus_heteroclitus
ENSXETG00000001447	thumpd3	91	58.495	ENSGMOG00000007923	thumpd3	91	58.925	Gadus_morhua
ENSXETG00000001447	thumpd3	91	63.655	ENSGALG00000044813	THUMPD3	96	64.256	Gallus_gallus
ENSXETG00000001447	thumpd3	89	59.737	ENSGAFG00000021645	thumpd3	87	59.956	Gambusia_affinis
ENSXETG00000001447	thumpd3	91	59.101	ENSGACG00000000930	thumpd3	95	59.101	Gasterosteus_aculeatus
ENSXETG00000001447	thumpd3	95	61.933	ENSGAGG00000022750	THUMPD3	98	60.938	Gopherus_agassizii
ENSXETG00000001447	thumpd3	95	59.796	ENSGGOG00000000604	THUMPD3	96	59.796	Gorilla_gorilla
ENSXETG00000001447	thumpd3	94	58.714	ENSHBUG00000013405	thumpd3	93	57.669	Haplochromis_burtoni
ENSXETG00000001447	thumpd3	95	62.525	ENSHGLG00000016200	THUMPD3	96	62.525	Heterocephalus_glaber_female
ENSXETG00000001447	thumpd3	95	53.170	ENSHGLG00100000505	-	100	52.104	Heterocephalus_glaber_male
ENSXETG00000001447	thumpd3	99	60.236	ENSHGLG00100017321	-	96	62.118	Heterocephalus_glaber_male
ENSXETG00000001447	thumpd3	91	59.657	ENSHCOG00000004871	thumpd3	94	58.798	Hippocampus_comes
ENSXETG00000001447	thumpd3	93	60.677	ENSIPUG00000019415	THUMPD3	94	59.408	Ictalurus_punctatus
ENSXETG00000001447	thumpd3	95	60.119	ENSSTOG00000003973	THUMPD3	96	60.679	Ictidomys_tridecemlineatus
ENSXETG00000001447	thumpd3	95	56.098	ENSJJAG00000017751	Thumpd3	95	54.890	Jaculus_jaculus
ENSXETG00000001447	thumpd3	91	60.129	ENSKMAG00000021025	thumpd3	85	59.829	Kryptolebias_marmoratus
ENSXETG00000001447	thumpd3	91	59.871	ENSLBEG00000012252	thumpd3	90	59.871	Labrus_bergylta
ENSXETG00000001447	thumpd3	96	58.215	ENSLACG00000018604	THUMPD3	96	58.621	Latimeria_chalumnae
ENSXETG00000001447	thumpd3	91	59.874	ENSLOCG00000009800	thumpd3	96	59.874	Lepisosteus_oculatus
ENSXETG00000001447	thumpd3	99	59.886	ENSLAFG00000005103	THUMPD3	100	59.393	Loxodonta_africana
ENSXETG00000001447	thumpd3	95	59.229	ENSMFAG00000044884	THUMPD3	96	59.229	Macaca_fascicularis
ENSXETG00000001447	thumpd3	95	59.229	ENSMMUG00000017307	THUMPD3	96	59.229	Macaca_mulatta
ENSXETG00000001447	thumpd3	95	59.229	ENSMNEG00000030529	THUMPD3	96	59.229	Macaca_nemestrina
ENSXETG00000001447	thumpd3	95	59.592	ENSMLEG00000032943	THUMPD3	96	59.229	Mandrillus_leucophaeus
ENSXETG00000001447	thumpd3	89	60.486	ENSMAMG00000023934	thumpd3	88	60.927	Mastacembelus_armatus
ENSXETG00000001447	thumpd3	94	58.714	ENSMZEG00005010623	thumpd3	93	57.669	Maylandia_zebra
ENSXETG00000001447	thumpd3	80	66.093	ENSMGAG00000010182	THUMPD3	100	66.423	Meleagris_gallopavo
ENSXETG00000001447	thumpd3	95	58.882	ENSMAUG00000012250	Thumpd3	96	59.722	Mesocricetus_auratus
ENSXETG00000001447	thumpd3	96	57.957	ENSMICG00000010095	THUMPD3	96	57.198	Microcebus_murinus
ENSXETG00000001447	thumpd3	95	59.562	ENSMOCG00000020148	Thumpd3	97	60.277	Microtus_ochrogaster
ENSXETG00000001447	thumpd3	91	59.657	ENSMMOG00000021791	thumpd3	94	59.442	Mola_mola
ENSXETG00000001447	thumpd3	98	58.444	ENSMODG00000004715	-	99	57.598	Monodelphis_domestica
ENSXETG00000001447	thumpd3	89	59.202	ENSMALG00000017316	thumpd3	91	59.202	Monopterus_albus
ENSXETG00000001447	thumpd3	62	53.116	MGP_CAROLIEiJ_G0028714	-	65	51.205	Mus_caroli
ENSXETG00000001447	thumpd3	90	61.325	ENSMUSG00000030264	Thumpd3	90	61.325	Mus_musculus
ENSXETG00000001447	thumpd3	90	61.325	MGP_PahariEiJ_G0022465	Thumpd3	91	61.075	Mus_pahari
ENSXETG00000001447	thumpd3	95	59.363	MGP_SPRETEiJ_G0029742	Thumpd3	97	59.363	Mus_spretus
ENSXETG00000001447	thumpd3	95	62.272	ENSMPUG00000017066	-	96	62.146	Mustela_putorius_furo
ENSXETG00000001447	thumpd3	95	55.888	ENSMPUG00000005219	-	96	57.260	Mustela_putorius_furo
ENSXETG00000001447	thumpd3	95	59.642	ENSMLUG00000008538	THUMPD3	95	60.442	Myotis_lucifugus
ENSXETG00000001447	thumpd3	95	49.898	ENSNGAG00000001549	-	96	49.593	Nannospalax_galili
ENSXETG00000001447	thumpd3	95	59.443	ENSNGAG00000021014	-	97	59.010	Nannospalax_galili
ENSXETG00000001447	thumpd3	91	59.442	ENSNBRG00000004886	thumpd3	90	59.442	Neolamprologus_brichardi
ENSXETG00000001447	thumpd3	95	60.000	ENSNLEG00000003863	THUMPD3	96	60.000	Nomascus_leucogenys
ENSXETG00000001447	thumpd3	82	60.870	ENSMEUG00000009819	THUMPD3	98	60.508	Notamacropus_eugenii
ENSXETG00000001447	thumpd3	80	62.222	ENSOPRG00000002020	THUMPD3	95	61.594	Ochotona_princeps
ENSXETG00000001447	thumpd3	70	60.446	ENSODEG00000018242	THUMPD3	100	60.446	Octodon_degus
ENSXETG00000001447	thumpd3	91	59.657	ENSONIG00000018977	thumpd3	90	59.657	Oreochromis_niloticus
ENSXETG00000001447	thumpd3	82	59.441	ENSOANG00000014481	THUMPD3	99	58.042	Ornithorhynchus_anatinus
ENSXETG00000001447	thumpd3	99	60.665	ENSOCUG00000010921	THUMPD3	99	59.733	Oryctolagus_cuniculus
ENSXETG00000001447	thumpd3	91	60.043	ENSORLG00000000676	thumpd3	91	60.043	Oryzias_latipes
ENSXETG00000001447	thumpd3	91	60.256	ENSORLG00020007509	thumpd3	91	60.256	Oryzias_latipes_hni
ENSXETG00000001447	thumpd3	91	60.470	ENSORLG00015003615	thumpd3	91	60.470	Oryzias_latipes_hsok
ENSXETG00000001447	thumpd3	94	58.664	ENSOMEG00000014115	thumpd3	93	59.290	Oryzias_melastigma
ENSXETG00000001447	thumpd3	80	60.934	ENSOGAG00000017111	THUMPD3	98	58.810	Otolemur_garnettii
ENSXETG00000001447	thumpd3	95	61.585	ENSOARG00000007139	THUMPD3	94	60.672	Ovis_aries
ENSXETG00000001447	thumpd3	95	59.796	ENSPPAG00000025852	THUMPD3	96	59.796	Pan_paniscus
ENSXETG00000001447	thumpd3	95	60.236	ENSPPRG00000008071	THUMPD3	96	61.310	Panthera_pardus
ENSXETG00000001447	thumpd3	95	60.236	ENSPTIG00000017923	THUMPD3	97	61.660	Panthera_tigris_altaica
ENSXETG00000001447	thumpd3	95	59.592	ENSPTRG00000014585	THUMPD3	96	59.592	Pan_troglodytes
ENSXETG00000001447	thumpd3	95	59.026	ENSPANG00000016253	THUMPD3	96	59.026	Papio_anubis
ENSXETG00000001447	thumpd3	90	61.339	ENSPKIG00000014009	thumpd3	91	60.907	Paramormyrops_kingsleyae
ENSXETG00000001447	thumpd3	95	62.253	ENSPSIG00000007370	THUMPD3	98	62.253	Pelodiscus_sinensis
ENSXETG00000001447	thumpd3	89	59.735	ENSPMGG00000017563	thumpd3	90	59.735	Periophthalmus_magnuspinnatus
ENSXETG00000001447	thumpd3	95	60.277	ENSPEMG00000022411	Thumpd3	96	59.325	Peromyscus_maniculatus_bairdii
ENSXETG00000001447	thumpd3	91	51.627	ENSPMAG00000001291	thumpd3	99	52.495	Petromyzon_marinus
ENSXETG00000001447	thumpd3	95	58.189	ENSPCIG00000002049	THUMPD3	97	59.486	Phascolarctos_cinereus
ENSXETG00000001447	thumpd3	91	58.936	ENSPFOG00000002318	thumpd3	90	58.936	Poecilia_formosa
ENSXETG00000001447	thumpd3	91	58.936	ENSPLAG00000014804	thumpd3	90	58.936	Poecilia_latipinna
ENSXETG00000001447	thumpd3	91	58.936	ENSPMEG00000000582	thumpd3	90	58.936	Poecilia_mexicana
ENSXETG00000001447	thumpd3	91	59.236	ENSPREG00000009176	thumpd3	90	59.574	Poecilia_reticulata
ENSXETG00000001447	thumpd3	87	46.980	ENSPPYG00000017616	-	87	47.072	Pongo_abelii
ENSXETG00000001447	thumpd3	95	59.592	ENSPPYG00000029461	THUMPD3	96	59.592	Pongo_abelii
ENSXETG00000001447	thumpd3	83	62.175	ENSPCAG00000015398	THUMPD3	95	64.373	Procavia_capensis
ENSXETG00000001447	thumpd3	95	52.041	ENSPCOG00000018095	-	96	53.024	Propithecus_coquereli
ENSXETG00000001447	thumpd3	86	55.079	ENSPCOG00000023618	-	99	55.079	Propithecus_coquereli
ENSXETG00000001447	thumpd3	95	60.569	ENSPVAG00000008721	THUMPD3	97	59.406	Pteropus_vampyrus
ENSXETG00000001447	thumpd3	94	58.714	ENSPNYG00000006918	thumpd3	93	57.669	Pundamilia_nyererei
ENSXETG00000001447	thumpd3	92	59.402	ENSPNAG00000014936	thumpd3	93	59.615	Pygocentrus_nattereri
ENSXETG00000001447	thumpd3	96	59.394	ENSRNOG00000006941	Thumpd3	97	59.394	Rattus_norvegicus
ENSXETG00000001447	thumpd3	95	59.229	ENSRBIG00000035954	THUMPD3	97	59.229	Rhinopithecus_bieti
ENSXETG00000001447	thumpd3	95	59.229	ENSRROG00000035734	THUMPD3	97	59.229	Rhinopithecus_roxellana
ENSXETG00000001447	thumpd3	95	59.509	ENSSBOG00000023567	THUMPD3	99	59.138	Saimiri_boliviensis_boliviensis
ENSXETG00000001447	thumpd3	89	63.974	ENSSHAG00000014467	THUMPD3	90	62.393	Sarcophilus_harrisii
ENSXETG00000001447	thumpd3	90	62.771	ENSSFOG00015019210	thumpd3	90	62.554	Scleropages_formosus
ENSXETG00000001447	thumpd3	93	59.197	ENSSMAG00000000609	thumpd3	90	60.619	Scophthalmus_maximus
ENSXETG00000001447	thumpd3	91	58.458	ENSSDUG00000012179	thumpd3	93	58.458	Seriola_dumerili
ENSXETG00000001447	thumpd3	91	58.369	ENSSLDG00000022028	thumpd3	91	58.369	Seriola_lalandi_dorsalis
ENSXETG00000001447	thumpd3	82	74.497	ENSSARG00000002239	THUMPD3	83	74.497	Sorex_araneus
ENSXETG00000001447	thumpd3	95	62.035	ENSSPUG00000017461	THUMPD3	98	62.035	Sphenodon_punctatus
ENSXETG00000001447	thumpd3	94	59.336	ENSSPAG00000008345	thumpd3	92	59.336	Stegastes_partitus
ENSXETG00000001447	thumpd3	95	62.041	ENSSSCG00000011542	THUMPD3	97	61.741	Sus_scrofa
ENSXETG00000001447	thumpd3	89	64.770	ENSTGUG00000010440	THUMPD3	100	63.913	Taeniopygia_guttata
ENSXETG00000001447	thumpd3	94	52.977	ENSTRUG00000004420	thumpd3	94	53.928	Takifugu_rubripes
ENSXETG00000001447	thumpd3	91	60.560	ENSTNIG00000014627	thumpd3	95	60.560	Tetraodon_nigroviridis
ENSXETG00000001447	thumpd3	95	58.045	ENSTBEG00000003450	THUMPD3	96	56.773	Tupaia_belangeri
ENSXETG00000001447	thumpd3	95	61.711	ENSTTRG00000009694	THUMPD3	96	60.516	Tursiops_truncatus
ENSXETG00000001447	thumpd3	95	60.931	ENSUAMG00000009412	THUMPD3	97	59.722	Ursus_americanus
ENSXETG00000001447	thumpd3	95	59.959	ENSUMAG00000019241	THUMPD3	96	60.446	Ursus_maritimus
ENSXETG00000001447	thumpd3	82	57.547	ENSVPAG00000002855	THUMPD3	100	56.751	Vicugna_pacos
ENSXETG00000001447	thumpd3	95	59.880	ENSVVUG00000025278	THUMPD3	97	60.913	Vulpes_vulpes
ENSXETG00000001447	thumpd3	91	58.051	ENSXCOG00000000159	thumpd3	91	59.300	Xiphophorus_couchianus
ENSXETG00000001447	thumpd3	89	59.519	ENSXMAG00000001423	thumpd3	87	59.519	Xiphophorus_maculatus