EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000001712 (Gene tree)
Gene ID: -
Gene Symbol: pprc1
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 16179 bases
Position: chrGL173276.1:391261-407439
Accession: XB-GENE-6469512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000003593	RRM_1	PF00076.22	5e-08	1	1
ENSXETP00000059780	RRM_1	PF00076.22	1.5e-07	1	1
ENSXETP00000061131	RRM_1	PF00076.22	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062557	-	4503	-	ENSXETP00000061131	1500 (aa)	-	F6TZT7
ENSXETT00000003593	-	1290	-	ENSXETP00000003593	430 (aa)	-	F6VYZ3
ENSXETT00000066356	-	3696	-	ENSXETP00000059780	1231 (aa)	-	F6Q3J8

Gene Model

Click here to download ENSXETG00000001712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001712	pprc1	54	69.725	ENSACIG00000022532	pprc1	69	67.176	Amphilophus_citrinellus
ENSXETG00000001712	pprc1	100	45.139	ENSCHIG00000011471	PPRC1	50	61.029	Capra_hircus
ENSXETG00000001712	pprc1	67	72.789	ENSCPBG00000005408	PPRC1	53	72.789	Chrysemys_picta_bellii
ENSXETG00000001712	pprc1	53	74.312	ENSCVAG00000003223	pprc1	51	71.756	Cyprinodon_variegatus
ENSXETG00000001712	pprc1	58	77.049	ENSFALG00000008489	PPRC1	51	76.923	Ficedula_albicollis
ENSXETG00000001712	pprc1	54	71.560	ENSFHEG00000003893	pprc1	56	70.229	Fundulus_heteroclitus
ENSXETG00000001712	pprc1	53	74.257	ENSGMOG00000004388	-	52	66.187	Gadus_morhua
ENSXETG00000001712	pprc1	80	76.923	ENSGALG00000020742	PPRC1	53	76.923	Gallus_gallus
ENSXETG00000001712	pprc1	76	74.830	ENSGAGG00000000257	PPRC1	56	74.830	Gopherus_agassizii
ENSXETG00000001712	pprc1	53	73.737	ENSLBEG00000015862	pprc1	50	50.971	Labrus_bergylta
ENSXETG00000001712	pprc1	81	75.949	ENSLACG00000001407	-	50	77.551	Latimeria_chalumnae
ENSXETG00000001712	pprc1	58	77.049	ENSMGAG00000010023	PPRC1	50	76.923	Meleagris_gallopavo
ENSXETG00000001712	pprc1	55	71.429	ENSMMOG00000010659	-	57	58.621	Mola_mola
ENSXETG00000001712	pprc1	53	81.022	ENSMLUG00000006217	PPRC1	56	76.190	Myotis_lucifugus
ENSXETG00000001712	pprc1	68	53.846	ENSPREG00000020657	pprc1	55	69.600	Poecilia_reticulata
ENSXETG00000001712	pprc1	53	70.874	ENSPNYG00000009171	-	60	68.000	Pundamilia_nyererei
ENSXETG00000001712	pprc1	51	70.526	ENSSLDG00000002659	-	53	65.625	Seriola_lalandi_dorsalis
ENSXETG00000001712	pprc1	50	81.022	ENSUAMG00000028058	PPRC1	59	57.143	Ursus_americanus