EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000001806 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa3
Alias: -
Full Name: Xenopus tropicalis heterogeneous nuclear ribonucleoprotein A3 (hnrnpa3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6925 bases
Position: chrGL172799.1:39307-46231
Accession: NM_001126556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000003780	RRM_1	PF00076.22	5.7e-35	1	2
ENSXETP00000003780	RRM_1	PF00076.22	5.7e-35	2	2
ENSXETP00000003776	RRM_1	PF00076.22	5.9e-35	1	2
ENSXETP00000003776	RRM_1	PF00076.22	5.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000003776	-	1717	-	ENSXETP00000003776	378 (aa)	-	F6VXS3
ENSXETT00000003780	-	1693	-	ENSXETP00000003780	375 (aa)	-	F6VXF3

Gene Model

Click here to download ENSXETG00000001806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000001806	hnrnpa3	84	63.722	ENSXETG00000012170	hnrnpa2b1	57	77.957
ENSXETG00000001806	hnrnpa3	95	60.811	ENSXETG00000021277	hnrnpa1	57	83.756
ENSXETG00000001806	hnrnpa3	67	35.802	ENSXETG00000003836	hnrnpab	58	38.378
ENSXETG00000001806	hnrnpa3	55	44.175	ENSXETG00000012569	hnrnpd	64	44.845
ENSXETG00000001806	hnrnpa3	81	34.091	ENSXETG00000023026	hnrnpdl	61	37.097
ENSXETG00000001806	hnrnpa3	53	40.909	ENSXETG00000012216	msi1	56	41.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001806	hnrnpa3	51	80.829	ENSAPOG00000014678	-	56	80.829	Acanthochromis_polyacanthus
ENSXETG00000001806	hnrnpa3	54	80.100	ENSAPOG00000003688	hnrnpa3	54	81.313	Acanthochromis_polyacanthus
ENSXETG00000001806	hnrnpa3	72	50.382	ENSAPOG00000003387	HNRNPA0	67	62.694	Acanthochromis_polyacanthus
ENSXETG00000001806	hnrnpa3	52	80.000	ENSAPOG00000003641	hnrnpa3	76	80.526	Acanthochromis_polyacanthus
ENSXETG00000001806	hnrnpa3	57	92.308	ENSAMEG00000004293	-	62	86.452	Ailuropoda_melanoleuca
ENSXETG00000001806	hnrnpa3	50	62.778	ENSACIG00000021834	HNRNPA0	86	61.026	Amphilophus_citrinellus
ENSXETG00000001806	hnrnpa3	54	80.100	ENSAOCG00000004095	hnrnpa3	54	81.313	Amphiprion_ocellaris
ENSXETG00000001806	hnrnpa3	54	80.100	ENSAPEG00000022522	hnrnpa3	54	81.313	Amphiprion_percula
ENSXETG00000001806	hnrnpa3	54	80.100	ENSATEG00000015304	hnrnpa3	59	81.313	Anabas_testudineus
ENSXETG00000001806	hnrnpa3	54	92.537	ENSACAG00000012234	-	53	92.537	Anolis_carolinensis
ENSXETG00000001806	hnrnpa3	54	88.557	ENSANAG00000037918	-	56	88.557	Aotus_nancymaae
ENSXETG00000001806	hnrnpa3	61	49.782	ENSANAG00000017086	HNRNPA0	61	59.896	Aotus_nancymaae
ENSXETG00000001806	hnrnpa3	52	82.143	ENSACLG00000008532	hnrnpa3	59	82.143	Astatotilapia_calliptera
ENSXETG00000001806	hnrnpa3	75	47.887	ENSACLG00000008973	HNRNPA0	74	49.372	Astatotilapia_calliptera
ENSXETG00000001806	hnrnpa3	51	85.340	ENSAMXG00000007065	hnrnpa3	57	85.075	Astyanax_mexicanus
ENSXETG00000001806	hnrnpa3	54	87.065	ENSCJAG00000013830	-	55	87.065	Callithrix_jacchus
ENSXETG00000001806	hnrnpa3	62	50.000	ENSCHIG00000002602	HNRNPA0	62	60.417	Capra_hircus
ENSXETG00000001806	hnrnpa3	54	81.592	ENSCAPG00000003643	-	53	81.592	Cavia_aperea
ENSXETG00000001806	hnrnpa3	74	50.719	ENSCPOG00000026092	HNRNPA0	62	60.417	Cavia_porcellus
ENSXETG00000001806	hnrnpa3	74	52.158	ENSCCAG00000010302	HNRNPA0	61	59.896	Cebus_capucinus
ENSXETG00000001806	hnrnpa3	63	52.941	ENSCATG00000021167	HNRNPA0	61	60.417	Cercocebus_atys
ENSXETG00000001806	hnrnpa3	50	78.610	ENSCATG00000038569	-	55	77.500	Cercocebus_atys
ENSXETG00000001806	hnrnpa3	55	56.311	ENSCLAG00000007120	-	51	56.311	Chinchilla_lanigera
ENSXETG00000001806	hnrnpa3	74	51.439	ENSCSAG00000000499	HNRNPA0	62	60.417	Chlorocebus_sabaeus
ENSXETG00000001806	hnrnpa3	80	50.331	ENSCING00000013663	-	54	64.851	Ciona_intestinalis
ENSXETG00000001806	hnrnpa3	54	89.552	ENSCANG00000017881	-	54	89.552	Colobus_angolensis_palliatus
ENSXETG00000001806	hnrnpa3	74	51.439	ENSCANG00000038062	HNRNPA0	61	60.417	Colobus_angolensis_palliatus
ENSXETG00000001806	hnrnpa3	53	72.185	ENSCGRG00001012459	-	50	70.186	Cricetulus_griseus_chok1gshd
ENSXETG00000001806	hnrnpa3	53	74.627	ENSCGRG00001010070	-	67	74.879	Cricetulus_griseus_chok1gshd
ENSXETG00000001806	hnrnpa3	87	84.946	ENSCGRG00000003686	-	66	84.946	Cricetulus_griseus_crigri
ENSXETG00000001806	hnrnpa3	53	74.627	ENSCGRG00000007592	-	66	74.879	Cricetulus_griseus_crigri
ENSXETG00000001806	hnrnpa3	53	80.808	ENSCVAG00000018995	hnrnpa3	57	80.808	Cyprinodon_variegatus
ENSXETG00000001806	hnrnpa3	51	84.293	ENSDARG00000059351	hnrnpa3	82	84.772	Danio_rerio
ENSXETG00000001806	hnrnpa3	54	88.119	ENSDNOG00000031964	-	63	87.624	Dasypus_novemcinctus
ENSXETG00000001806	hnrnpa3	50	73.262	ENSDORG00000023528	-	50	71.642	Dipodomys_ordii
ENSXETG00000001806	hnrnpa3	85	61.199	ENSETEG00000007747	-	69	77.778	Echinops_telfairi
ENSXETG00000001806	hnrnpa3	73	56.682	ENSEBUG00000007989	-	58	59.608	Eptatretus_burgeri
ENSXETG00000001806	hnrnpa3	66	59.677	ENSEBUG00000016570	HNRNPA0	54	73.770	Eptatretus_burgeri
ENSXETG00000001806	hnrnpa3	83	46.326	ENSECAG00000032164	HNRNPA0	62	60.417	Equus_caballus
ENSXETG00000001806	hnrnpa3	88	62.840	ENSELUG00000023080	hnrnpa3	67	80.711	Esox_lucius
ENSXETG00000001806	hnrnpa3	88	65.569	ENSFDAG00000000331	-	52	74.257	Fukomys_damarensis
ENSXETG00000001806	hnrnpa3	78	88.000	ENSFDAG00000009547	-	53	63.500	Fukomys_damarensis
ENSXETG00000001806	hnrnpa3	54	68.812	ENSFDAG00000018739	-	73	68.812	Fukomys_damarensis
ENSXETG00000001806	hnrnpa3	53	57.426	ENSFDAG00000019780	HNRNPA0	80	60.309	Fukomys_damarensis
ENSXETG00000001806	hnrnpa3	53	74.129	ENSFDAG00000014067	-	59	74.500	Fukomys_damarensis
ENSXETG00000001806	hnrnpa3	50	59.669	ENSGMOG00000016232	HNRNPA0	68	58.854	Gadus_morhua
ENSXETG00000001806	hnrnpa3	87	59.939	ENSGACG00000004477	hnrnpa3	68	80.729	Gasterosteus_aculeatus
ENSXETG00000001806	hnrnpa3	52	82.143	ENSHBUG00000019734	hnrnpa3	59	82.143	Haplochromis_burtoni
ENSXETG00000001806	hnrnpa3	50	62.778	ENSHBUG00000023868	HNRNPA0	74	61.780	Haplochromis_burtoni
ENSXETG00000001806	hnrnpa3	54	80.198	ENSHGLG00000014577	-	72	80.198	Heterocephalus_glaber_female
ENSXETG00000001806	hnrnpa3	54	88.119	ENSHGLG00100006677	-	56	88.119	Heterocephalus_glaber_male
ENSXETG00000001806	hnrnpa3	54	84.577	ENSHGLG00100001336	-	56	84.577	Heterocephalus_glaber_male
ENSXETG00000001806	hnrnpa3	51	62.275	ENSHCOG00000007174	HNRNPA0	95	62.275	Hippocampus_comes
ENSXETG00000001806	hnrnpa3	51	85.789	ENSIPUG00000019815	RO32	60	85.075	Ictalurus_punctatus
ENSXETG00000001806	hnrnpa3	55	70.142	ENSSTOG00000019374	-	54	70.142	Ictidomys_tridecemlineatus
ENSXETG00000001806	hnrnpa3	61	52.766	ENSJJAG00000006954	Hnrnpa0	71	56.522	Jaculus_jaculus
ENSXETG00000001806	hnrnpa3	54	80.100	ENSKMAG00000015973	hnrnpa3	59	81.313	Kryptolebias_marmoratus
ENSXETG00000001806	hnrnpa3	54	80.597	ENSLBEG00000016767	hnrnpa3	59	81.407	Labrus_bergylta
ENSXETG00000001806	hnrnpa3	59	82.063	ENSLACG00000008189	hnrnpa3	56	86.432	Latimeria_chalumnae
ENSXETG00000001806	hnrnpa3	90	45.507	ENSLACG00000014480	HNRNPA0	63	59.474	Latimeria_chalumnae
ENSXETG00000001806	hnrnpa3	54	85.149	ENSLOCG00000006986	hnrnpa3	57	88.000	Lepisosteus_oculatus
ENSXETG00000001806	hnrnpa3	85	65.528	ENSLAFG00000027712	-	80	67.742	Loxodonta_africana
ENSXETG00000001806	hnrnpa3	74	51.439	ENSMFAG00000030522	HNRNPA0	61	60.417	Macaca_fascicularis
ENSXETG00000001806	hnrnpa3	50	77.778	ENSMMUG00000031232	-	56	76.733	Macaca_mulatta
ENSXETG00000001806	hnrnpa3	57	73.023	ENSMNEG00000038943	-	80	75.248	Macaca_nemestrina
ENSXETG00000001806	hnrnpa3	74	51.439	ENSMNEG00000015863	HNRNPA0	61	60.417	Macaca_nemestrina
ENSXETG00000001806	hnrnpa3	89	61.538	ENSMLEG00000033415	-	57	75.000	Mandrillus_leucophaeus
ENSXETG00000001806	hnrnpa3	63	52.941	ENSMLEG00000026629	HNRNPA0	61	60.417	Mandrillus_leucophaeus
ENSXETG00000001806	hnrnpa3	68	52.381	ENSMAMG00000017754	HNRNPA0	82	62.963	Mastacembelus_armatus
ENSXETG00000001806	hnrnpa3	52	82.143	ENSMZEG00005004663	hnrnpa3	59	82.143	Maylandia_zebra
ENSXETG00000001806	hnrnpa3	75	47.887	ENSMZEG00005001055	HNRNPA0	74	49.372	Maylandia_zebra
ENSXETG00000001806	hnrnpa3	67	47.744	ENSMAUG00000018485	Hnrnpa0	63	60.000	Mesocricetus_auratus
ENSXETG00000001806	hnrnpa3	54	82.090	ENSMODG00000024570	-	56	82.090	Monodelphis_domestica
ENSXETG00000001806	hnrnpa3	59	80.588	ENSMALG00000009691	hnrnpa3	83	79.293	Monopterus_albus
ENSXETG00000001806	hnrnpa3	54	56.650	MGP_SPRETEiJ_G0019473	Hnrnpa0	64	59.487	Mus_spretus
ENSXETG00000001806	hnrnpa3	51	51.121	ENSNGAG00000008883	Hnrnpa0	66	59.585	Nannospalax_galili
ENSXETG00000001806	hnrnpa3	79	71.795	ENSNGAG00000001008	-	59	69.953	Nannospalax_galili
ENSXETG00000001806	hnrnpa3	63	52.941	ENSNLEG00000008518	HNRNPA0	60	60.417	Nomascus_leucogenys
ENSXETG00000001806	hnrnpa3	54	86.567	ENSNLEG00000027151	-	57	86.567	Nomascus_leucogenys
ENSXETG00000001806	hnrnpa3	60	50.000	ENSODEG00000019566	HNRNPA0	62	60.417	Octodon_degus
ENSXETG00000001806	hnrnpa3	65	52.717	ENSORLG00000027074	-	81	52.717	Oryzias_latipes
ENSXETG00000001806	hnrnpa3	53	81.818	ENSORLG00000017561	hnrnpa3	58	81.818	Oryzias_latipes
ENSXETG00000001806	hnrnpa3	51	53.571	ENSORLG00000025015	-	59	55.191	Oryzias_latipes
ENSXETG00000001806	hnrnpa3	51	53.571	ENSORLG00000025332	-	59	55.191	Oryzias_latipes
ENSXETG00000001806	hnrnpa3	54	81.095	ENSORLG00020020788	hnrnpa3	58	81.818	Oryzias_latipes_hni
ENSXETG00000001806	hnrnpa3	77	43.197	ENSORLG00020008203	-	60	52.247	Oryzias_latipes_hni
ENSXETG00000001806	hnrnpa3	90	42.899	ENSORLG00020007109	-	60	51.337	Oryzias_latipes_hni
ENSXETG00000001806	hnrnpa3	51	52.514	ENSORLG00020007505	-	60	52.514	Oryzias_latipes_hni
ENSXETG00000001806	hnrnpa3	76	43.796	ENSORLG00020022487	-	67	52.604	Oryzias_latipes_hni
ENSXETG00000001806	hnrnpa3	59	49.302	ENSORLG00015015182	-	79	53.846	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	51	52.747	ENSORLG00015015185	-	62	53.933	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	72	41.026	ENSORLG00015016236	HNRNPA0	62	45.679	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	51	51.955	ENSORLG00015016169	HNRNPA0	60	51.955	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	92	43.529	ENSORLG00015016507	-	64	53.297	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	51	52.514	ENSORLG00015016157	-	63	52.514	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	54	80.597	ENSORLG00015014774	hnrnpa3	58	81.818	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	92	44.023	ENSORLG00015017144	-	59	53.371	Oryzias_latipes_hsok
ENSXETG00000001806	hnrnpa3	54	80.100	ENSOMEG00000004838	hnrnpa3	59	81.313	Oryzias_melastigma
ENSXETG00000001806	hnrnpa3	75	50.355	ENSOARG00000015434	HNRNPA0	63	60.417	Ovis_aries
ENSXETG00000001806	hnrnpa3	74	51.439	ENSPPAG00000005303	HNRNPA0	60	60.417	Pan_paniscus
ENSXETG00000001806	hnrnpa3	74	51.439	ENSPPRG00000014655	HNRNPA0	61	60.417	Panthera_pardus
ENSXETG00000001806	hnrnpa3	74	51.439	ENSPTRG00000017273	HNRNPA0	60	60.417	Pan_troglodytes
ENSXETG00000001806	hnrnpa3	63	52.941	ENSPANG00000012900	HNRNPA0	61	60.417	Papio_anubis
ENSXETG00000001806	hnrnpa3	63	58.442	ENSPKIG00000020281	-	55	65.957	Paramormyrops_kingsleyae
ENSXETG00000001806	hnrnpa3	54	86.567	ENSPKIG00000022916	hnrnpa3	71	87.437	Paramormyrops_kingsleyae
ENSXETG00000001806	hnrnpa3	52	76.804	ENSPMGG00000000747	hnrnpa3	76	77.019	Periophthalmus_magnuspinnatus
ENSXETG00000001806	hnrnpa3	73	47.059	ENSPEMG00000020274	Hnrnpa0	80	59.794	Peromyscus_maniculatus_bairdii
ENSXETG00000001806	hnrnpa3	63	65.833	ENSPMAG00000004449	-	86	74.257	Petromyzon_marinus
ENSXETG00000001806	hnrnpa3	54	79.104	ENSPFOG00000014049	hnrnpa3	60	80.303	Poecilia_formosa
ENSXETG00000001806	hnrnpa3	89	45.963	ENSPLAG00000015223	-	61	55.319	Poecilia_latipinna
ENSXETG00000001806	hnrnpa3	54	79.104	ENSPMEG00000006390	hnrnpa3	60	80.303	Poecilia_mexicana
ENSXETG00000001806	hnrnpa3	77	58.681	ENSPREG00000005411	hnrnpa3	63	80.952	Poecilia_reticulata
ENSXETG00000001806	hnrnpa3	54	89.055	ENSPPYG00000001012	-	65	89.055	Pongo_abelii
ENSXETG00000001806	hnrnpa3	51	80.729	ENSPNYG00000008424	hnrnpa3	77	82.514	Pundamilia_nyererei
ENSXETG00000001806	hnrnpa3	60	56.306	ENSPNAG00000023333	HNRNPA0	63	62.234	Pygocentrus_nattereri
ENSXETG00000001806	hnrnpa3	74	51.439	ENSRBIG00000023673	HNRNPA0	61	60.417	Rhinopithecus_bieti
ENSXETG00000001806	hnrnpa3	87	64.024	ENSRROG00000034643	-	58	72.772	Rhinopithecus_roxellana
ENSXETG00000001806	hnrnpa3	74	51.439	ENSRROG00000002558	HNRNPA0	61	60.417	Rhinopithecus_roxellana
ENSXETG00000001806	hnrnpa3	52	83.077	ENSSFOG00015016280	hnrnpa1	57	83.077	Scleropages_formosus
ENSXETG00000001806	hnrnpa3	54	85.149	ENSSFOG00015001814	hnrnpa3	56	85.572	Scleropages_formosus
ENSXETG00000001806	hnrnpa3	55	78.049	ENSSMAG00000015218	hnrnpa3	52	79.798	Scophthalmus_maximus
ENSXETG00000001806	hnrnpa3	54	79.602	ENSSDUG00000000381	hnrnpa3	62	80.928	Seriola_dumerili
ENSXETG00000001806	hnrnpa3	51	52.941	ENSSPUG00000016613	HNRNPA0	71	56.364	Sphenodon_punctatus
ENSXETG00000001806	hnrnpa3	54	80.100	ENSSPAG00000008969	hnrnpa3	59	81.313	Stegastes_partitus
ENSXETG00000001806	hnrnpa3	50	66.842	ENSSSCG00000033635	-	53	66.842	Sus_scrofa
ENSXETG00000001806	hnrnpa3	51	65.789	ENSSSCG00000040926	-	59	61.611	Sus_scrofa
ENSXETG00000001806	hnrnpa3	58	67.265	ENSSSCG00000001098	-	53	66.829	Sus_scrofa
ENSXETG00000001806	hnrnpa3	89	63.881	ENSTRUG00000017504	hnrnpa3	60	79.602	Takifugu_rubripes
ENSXETG00000001806	hnrnpa3	88	43.636	ENSTRUG00000021494	-	62	52.973	Takifugu_rubripes
ENSXETG00000001806	hnrnpa3	55	77.561	ENSTNIG00000016958	hnrnpa3	60	77.561	Tetraodon_nigroviridis
ENSXETG00000001806	hnrnpa3	83	46.645	ENSTTRG00000000499	HNRNPA0	62	60.417	Tursiops_truncatus
ENSXETG00000001806	hnrnpa3	89	45.181	ENSXMAG00000029150	HNRNPA0	64	54.040	Xiphophorus_maculatus
ENSXETG00000001806	hnrnpa3	54	79.602	ENSXMAG00000000439	hnrnpa3	60	80.402	Xiphophorus_maculatus