EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000001921 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13624 bases
Position: chrGL173297.1:183242-196865
Accession: XB-GENE-6046043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004082	RRM_1	PF00076.22	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004082	-	5349	-	ENSXETP00000004082	1782 (aa)	-	F6XS76

Gene Model

Click here to download ENSXETG00000001921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001921	setd1a	73	47.007	ENSACIG00000007144	setd1a	55	77.049	Amphilophus_citrinellus
ENSXETG00000001921	setd1a	68	61.438	ENSACAG00000007606	-	59	60.227	Anolis_carolinensis
ENSXETG00000001921	setd1a	56	55.888	ENSCPBG00000010830	-	75	63.556	Chrysemys_picta_bellii
ENSXETG00000001921	setd1a	76	44.821	ENSFHEG00000023258	setd1a	56	77.143	Fundulus_heteroclitus
ENSXETG00000001921	setd1a	76	61.059	ENSGAGG00000010781	-	58	59.248	Gopherus_agassizii
ENSXETG00000001921	setd1a	59	57.258	ENSHCOG00000003119	setd1a	70	64.220	Hippocampus_comes
ENSXETG00000001921	setd1a	60	60.816	ENSMAMG00000021851	setd1a	60	65.854	Mastacembelus_armatus
ENSXETG00000001921	setd1a	50	79.739	ENSMAUG00000008959	-	64	65.537	Mesocricetus_auratus
ENSXETG00000001921	setd1a	58	59.513	ENSMMOG00000016992	setd1a	65	56.294	Mola_mola
ENSXETG00000001921	setd1a	50	79.412	ENSMUSG00000042308	Setd1a	98	67.358	Mus_musculus
ENSXETG00000001921	setd1a	50	79.412	MGP_PahariEiJ_G0013726	-	98	67.358	Mus_pahari
ENSXETG00000001921	setd1a	61	79.412	MGP_SPRETEiJ_G0031633	Setd1a	98	67.876	Mus_spretus
ENSXETG00000001921	setd1a	83	49.062	ENSOGAG00000028006	-	54	64.800	Otolemur_garnettii
ENSXETG00000001921	setd1a	50	78.758	ENSOARG00000008207	-	53	78.641	Ovis_aries
ENSXETG00000001921	setd1a	69	46.868	ENSPMAG00000008802	setd1a	50	46.804	Petromyzon_marinus
ENSXETG00000001921	setd1a	65	53.822	ENSTNIG00000014930	setd1a	60	54.335	Tetraodon_nigroviridis