EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000001959 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 2544 bases
Position: chrGL173539.1:292362-294905
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004178	MMR_HSR1	PF01926.23	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004178	-	2544	-	ENSXETP00000004178	848 (aa)	-	F6RJ25

Gene Model

Click here to download ENSXETG00000001959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000001959	-	98	55.663	ENSXETG00000023348	-	83	55.971
ENSXETG00000001959	-	98	55.502	ENSXETG00000015515	-	99	55.502
ENSXETG00000001959	-	98	56.014	ENSXETG00000015501	-	98	56.014
ENSXETG00000001959	-	98	60.490	ENSXETG00000002195	-	99	60.490
ENSXETG00000001959	-	98	59.785	ENSXETG00000012292	-	60	59.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001959	-	98	41.616	ENSAPOG00000005828	-	95	41.616	Acanthochromis_polyacanthus
ENSXETG00000001959	-	66	51.163	ENSACIG00000016940	-	98	51.163	Amphilophus_citrinellus
ENSXETG00000001959	-	63	41.055	ENSAPEG00000015878	-	97	41.055	Amphiprion_percula
ENSXETG00000001959	-	96	37.055	ENSATEG00000022785	-	89	37.055	Anabas_testudineus
ENSXETG00000001959	-	97	49.516	ENSACLG00000018613	URGCP	93	49.516	Astatotilapia_calliptera
ENSXETG00000001959	-	95	49.204	ENSACLG00000018733	-	53	49.204	Astatotilapia_calliptera
ENSXETG00000001959	-	92	56.494	ENSCPBG00000013662	-	86	56.494	Chrysemys_picta_bellii
ENSXETG00000001959	-	65	47.653	ENSELUG00000011934	-	99	47.653	Esox_lucius
ENSXETG00000001959	-	96	47.613	ENSNBRG00000011044	si:dkey-85k7.12	54	47.613	Neolamprologus_brichardi
ENSXETG00000001959	-	95	49.073	ENSONIG00000015975	-	98	49.073	Oreochromis_niloticus
ENSXETG00000001959	-	99	47.518	ENSPKIG00000012683	-	58	47.754	Paramormyrops_kingsleyae
ENSXETG00000001959	-	97	56.970	ENSPSIG00000014161	-	99	56.970	Pelodiscus_sinensis
ENSXETG00000001959	-	99	56.066	ENSPSIG00000012887	-	54	56.066	Pelodiscus_sinensis
ENSXETG00000001959	-	96	35.366	ENSPFOG00000020692	-	96	35.366	Poecilia_formosa
ENSXETG00000001959	-	95	44.828	ENSPLAG00000017220	-	51	44.828	Poecilia_latipinna
ENSXETG00000001959	-	59	35.897	ENSPLAG00000016435	-	89	35.897	Poecilia_latipinna
ENSXETG00000001959	-	59	35.897	ENSPMEG00000004085	-	89	35.897	Poecilia_mexicana
ENSXETG00000001959	-	95	42.066	ENSPMEG00000016889	-	53	42.066	Poecilia_mexicana
ENSXETG00000001959	-	87	54.960	ENSPREG00000016392	-	53	54.960	Poecilia_reticulata
ENSXETG00000001959	-	100	49.236	ENSPREG00000015355	si:dkey-85k7.12	97	49.236	Poecilia_reticulata
ENSXETG00000001959	-	99	44.379	ENSPREG00000016359	-	92	44.379	Poecilia_reticulata
ENSXETG00000001959	-	96	38.686	ENSPNYG00000004887	-	90	38.686	Pundamilia_nyererei
ENSXETG00000001959	-	95	39.157	ENSSLDG00000007637	-	97	39.157	Seriola_lalandi_dorsalis
ENSXETG00000001959	-	64	38.674	ENSSPAG00000013159	-	98	38.674	Stegastes_partitus