EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000001980 (Gene tree)
Gene ID: -
Gene Symbol: znf408
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1193 bases
Position: chrGL172718.1:2659254-2660446
Accession: XB-GENE-960608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	1	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	2	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	3	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	4	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	5	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	6	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	7	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	8	9
ENSXETP00000004234	zf-C2H2	PF00096.26	1.1e-37	9	9
ENSXETP00000004234	zf-met	PF12874.7	3e-12	1	2
ENSXETP00000004234	zf-met	PF12874.7	3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004234	-	1131	-	ENSXETP00000004234	376 (aa)	-	F6XRB4

Gene Model

Click here to download ENSXETG00000001980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000001980	znf408	77	38.697	ENSXETG00000032038	-	96	36.986
ENSXETG00000001980	znf408	74	40.625	ENSXETG00000006490	znf350	94	40.625
ENSXETG00000001980	znf408	75	41.525	ENSXETG00000030967	-	94	41.525
ENSXETG00000001980	znf408	79	40.066	ENSXETG00000001911	znf668	96	40.066
ENSXETG00000001980	znf408	75	40.860	ENSXETG00000016062	znf184	95	40.860
ENSXETG00000001980	znf408	75	41.844	ENSXETG00000031460	-	84	41.844
ENSXETG00000001980	znf408	75	43.357	ENSXETG00000023643	znf484	99	43.357
ENSXETG00000001980	znf408	74	40.824	ENSXETG00000013882	-	99	40.824
ENSXETG00000001980	znf408	84	39.672	ENSXETG00000016781	-	99	42.958
ENSXETG00000001980	znf408	89	34.158	ENSXETG00000009952	zbtb41	54	34.158
ENSXETG00000001980	znf408	85	36.364	ENSXETG00000020587	ovol1	63	36.364
ENSXETG00000001980	znf408	90	40.541	ENSXETG00000008801	znf628	99	37.143
ENSXETG00000001980	znf408	75	37.349	ENSXETG00000033508	-	67	37.349
ENSXETG00000001980	znf408	80	40.845	ENSXETG00000027149	-	100	40.845
ENSXETG00000001980	znf408	75	36.667	ENSXETG00000004510	gzf1	52	33.929
ENSXETG00000001980	znf408	77	33.922	ENSXETG00000031192	-	99	34.859
ENSXETG00000001980	znf408	76	34.940	ENSXETG00000033098	ZNF366	56	34.940
ENSXETG00000001980	znf408	79	32.641	ENSXETG00000027536	znf574	69	33.564
ENSXETG00000001980	znf408	80	38.835	ENSXETG00000001910	znf646	100	38.835
ENSXETG00000001980	znf408	77	33.099	ENSXETG00000002101	prdm5	72	33.099
ENSXETG00000001980	znf408	75	35.398	ENSXETG00000027366	snai1	55	35.514
ENSXETG00000001980	znf408	75	34.559	ENSXETG00000024006	snai2	54	34.559
ENSXETG00000001980	znf408	75	41.489	ENSXETG00000017175	-	100	41.489
ENSXETG00000001980	znf408	69	46.552	ENSXETG00000010512	-	99	38.750
ENSXETG00000001980	znf408	77	38.849	ENSXETG00000002717	-	99	38.849
ENSXETG00000001980	znf408	79	33.628	ENSXETG00000002339	znf423	69	34.940
ENSXETG00000001980	znf408	82	31.835	ENSXETG00000013744	znf319	90	31.959
ENSXETG00000001980	znf408	75	44.056	ENSXETG00000030307	-	100	41.135
ENSXETG00000001980	znf408	76	38.333	ENSXETG00000025282	-	99	38.333
ENSXETG00000001980	znf408	76	38.735	ENSXETG00000034213	-	99	40.187
ENSXETG00000001980	znf408	76	42.188	ENSXETG00000023597	-	99	47.458
ENSXETG00000001980	znf408	75	40.411	ENSXETG00000026673	-	90	40.411
ENSXETG00000001980	znf408	77	38.835	ENSXETG00000031310	-	69	37.184
ENSXETG00000001980	znf408	75	40.562	ENSXETG00000027484	znf432	62	40.562
ENSXETG00000001980	znf408	85	38.750	ENSXETG00000015125	-	94	38.750
ENSXETG00000001980	znf408	77	41.975	ENSXETG00000002690	-	55	41.975
ENSXETG00000001980	znf408	81	41.250	ENSXETG00000012506	znf91	100	41.250
ENSXETG00000001980	znf408	74	44.030	ENSXETG00000024118	-	98	44.030
ENSXETG00000001980	znf408	76	38.811	ENSXETG00000006575	znf420	88	39.286
ENSXETG00000001980	znf408	94	31.395	ENSXETG00000016091	e4f1	76	31.395
ENSXETG00000001980	znf408	75	39.779	ENSXETG00000030249	-	56	39.779
ENSXETG00000001980	znf408	76	38.095	ENSXETG00000006263	gfi1b	51	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001980	znf408	100	54.090	ENSG00000175213	ZNF408	52	55.145	Homo_sapiens
ENSXETG00000001980	znf408	100	55.145	ENSAMEG00000006904	ZNF408	51	55.673	Ailuropoda_melanoleuca
ENSXETG00000001980	znf408	100	53.298	ENSANAG00000036294	ZNF408	57	54.354	Aotus_nancymaae
ENSXETG00000001980	znf408	100	46.963	ENSAMXG00000032642	znf408	60	47.430	Astyanax_mexicanus
ENSXETG00000001980	znf408	100	53.562	ENSCJAG00000019859	ZNF408	52	54.881	Callithrix_jacchus
ENSXETG00000001980	znf408	100	54.354	ENSCAFG00000009143	ZNF408	50	55.673	Canis_familiaris
ENSXETG00000001980	znf408	100	54.354	ENSCAFG00020019155	ZNF408	50	55.673	Canis_lupus_dingo
ENSXETG00000001980	znf408	100	54.354	ENSCHIG00000025346	ZNF408	60	55.409	Capra_hircus
ENSXETG00000001980	znf408	100	53.050	ENSTSYG00000025443	ZNF408	53	54.111	Carlito_syrichta
ENSXETG00000001980	znf408	100	53.562	ENSCCAG00000029472	ZNF408	52	54.881	Cebus_capucinus
ENSXETG00000001980	znf408	78	61.189	ENSCHOG00000009909	ZNF408	54	62.587	Choloepus_hoffmanni
ENSXETG00000001980	znf408	100	54.211	ENSCGRG00001023588	Zfp408	52	54.211	Cricetulus_griseus_chok1gshd
ENSXETG00000001980	znf408	100	54.211	ENSCGRG00000017618	Zfp408	52	54.211	Cricetulus_griseus_crigri
ENSXETG00000001980	znf408	100	56.053	ENSDNOG00000047669	ZNF408	52	55.673	Dasypus_novemcinctus
ENSXETG00000001980	znf408	94	55.313	ENSDORG00000000387	Zfp408	54	55.586	Dipodomys_ordii
ENSXETG00000001980	znf408	100	55.409	ENSEASG00005015461	ZNF408	53	55.409	Equus_asinus_asinus
ENSXETG00000001980	znf408	100	55.409	ENSECAG00000010878	ZNF408	55	55.409	Equus_caballus
ENSXETG00000001980	znf408	100	54.762	ENSEEUG00000010466	ZNF408	54	55.291	Erinaceus_europaeus
ENSXETG00000001980	znf408	100	54.881	ENSFCAG00000029105	ZNF408	52	56.201	Felis_catus
ENSXETG00000001980	znf408	74	53.381	ENSGMOG00000007809	-	98	53.381	Gadus_morhua
ENSXETG00000001980	znf408	99	42.518	ENSGAFG00000018557	-	58	42.518	Gambusia_affinis
ENSXETG00000001980	znf408	100	54.090	ENSGGOG00000010152	ZNF408	52	55.145	Gorilla_gorilla
ENSXETG00000001980	znf408	100	53.826	ENSLAFG00000027848	ZNF408	60	55.145	Loxodonta_africana
ENSXETG00000001980	znf408	100	53.316	ENSMICG00000045320	ZNF408	52	54.642	Microcebus_murinus
ENSXETG00000001980	znf408	100	54.188	ENSMPUG00000005490	ZNF408	51	55.236	Mustela_putorius_furo
ENSXETG00000001980	znf408	99	53.723	ENSNGAG00000000309	Zfp408	52	54.090	Nannospalax_galili
ENSXETG00000001980	znf408	100	53.826	ENSNLEG00000014132	ZNF408	52	54.881	Nomascus_leucogenys
ENSXETG00000001980	znf408	100	53.581	ENSOPRG00000009225	ZNF408	54	54.642	Ochotona_princeps
ENSXETG00000001980	znf408	100	54.617	ENSOCUG00000010953	ZNF408	52	55.673	Oryctolagus_cuniculus
ENSXETG00000001980	znf408	100	54.881	ENSOGAG00000034080	ZNF408	60	54.881	Otolemur_garnettii
ENSXETG00000001980	znf408	100	54.090	ENSPPAG00000034993	ZNF408	52	55.145	Pan_paniscus
ENSXETG00000001980	znf408	100	54.881	ENSPPRG00000016866	ZNF408	52	56.201	Panthera_pardus
ENSXETG00000001980	znf408	100	54.881	ENSPTIG00000015467	ZNF408	51	56.201	Panthera_tigris_altaica
ENSXETG00000001980	znf408	100	54.090	ENSPTRG00000003551	ZNF408	52	55.145	Pan_troglodytes
ENSXETG00000001980	znf408	83	59.936	ENSPEMG00000016757	Zfp408	55	59.936	Peromyscus_maniculatus_bairdii
ENSXETG00000001980	znf408	99	45.669	ENSPFOG00000001760	-	90	45.669	Poecilia_formosa
ENSXETG00000001980	znf408	99	45.213	ENSPMEG00000021147	-	70	45.213	Poecilia_mexicana
ENSXETG00000001980	znf408	100	54.090	ENSPPYG00000003318	ZNF408	63	55.145	Pongo_abelii
ENSXETG00000001980	znf408	100	53.562	ENSPCAG00000014001	ZNF408	52	54.881	Procavia_capensis
ENSXETG00000001980	znf408	100	53.608	ENSPCOG00000028698	ZNF408	51	54.897	Propithecus_coquereli
ENSXETG00000001980	znf408	100	54.354	ENSPVAG00000015791	ZNF408	52	55.409	Pteropus_vampyrus
ENSXETG00000001980	znf408	100	53.034	ENSSBOG00000033023	ZNF408	52	54.354	Saimiri_boliviensis_boliviensis
ENSXETG00000001980	znf408	100	53.927	ENSSSCG00000023097	ZNF408	50	54.450	Sus_scrofa
ENSXETG00000001980	znf408	100	55.145	ENSUAMG00000026154	ZNF408	51	55.673	Ursus_americanus
ENSXETG00000001980	znf408	100	55.145	ENSUMAG00000014405	ZNF408	52	55.673	Ursus_maritimus
ENSXETG00000001980	znf408	100	54.617	ENSVVUG00000026805	ZNF408	50	55.937	Vulpes_vulpes
ENSXETG00000001980	znf408	99	45.833	ENSXCOG00000002869	-	83	45.455	Xiphophorus_couchianus
ENSXETG00000001980	znf408	99	44.681	ENSXMAG00000018347	-	70	44.681	Xiphophorus_maculatus