EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000001997 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: -
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 6008 bases
Position: chrGL173167.1:370310-376317
Accession: XB-GENE-5893304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004278	FDF	PF09532.10	3.7e-15	1	1
ENSXETP00000004276	FDF	PF09532.10	4.8e-15	1	1
ENSXETP00000004278	SM-ATX	PF14438.6	1.7e-08	1	1
ENSXETP00000004276	SM-ATX	PF14438.6	2.1e-08	1	1
ENSXETP00000004278	LSM14	PF12701.7	2.7e-32	1	1
ENSXETP00000004276	LSM14	PF12701.7	3.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004276	-	1104	-	ENSXETP00000004276	368 (aa)	-	F6WXX3
ENSXETT00000004278	-	984	-	ENSXETP00000004278	328 (aa)	-	F6WXW5

Gene Model

Click here to download ENSXETG00000001997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000001997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000001997	lsm14b	99	51.562	ENSXETG00000002359	lsm14a	81	51.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000001997	lsm14b	99	77.370	ENSG00000149657	LSM14B	99	72.355	Homo_sapiens
ENSXETG00000001997	lsm14b	99	55.224	ENSAPOG00000001780	lsm14b	85	55.030	Acanthochromis_polyacanthus
ENSXETG00000001997	lsm14b	99	71.545	ENSAMEG00000013430	LSM14B	87	73.713	Ailuropoda_melanoleuca
ENSXETG00000001997	lsm14b	63	36.239	ENSACIG00000003147	LSM14B	77	35.780	Amphilophus_citrinellus
ENSXETG00000001997	lsm14b	100	54.328	ENSACIG00000012266	lsm14b	85	52.663	Amphilophus_citrinellus
ENSXETG00000001997	lsm14b	99	48.378	ENSAOCG00000006667	LSM14B	85	47.198	Amphiprion_ocellaris
ENSXETG00000001997	lsm14b	99	55.060	ENSAOCG00000012380	lsm14b	85	55.325	Amphiprion_ocellaris
ENSXETG00000001997	lsm14b	99	51.205	ENSAPEG00000023633	lsm14b	84	52.108	Amphiprion_percula
ENSXETG00000001997	lsm14b	66	38.281	ENSATEG00000015895	LSM14B	82	37.956	Anabas_testudineus
ENSXETG00000001997	lsm14b	99	54.819	ENSATEG00000016603	lsm14b	85	54.762	Anabas_testudineus
ENSXETG00000001997	lsm14b	91	74.926	ENSAPLG00000013203	LSM14B	85	74.041	Anas_platyrhynchos
ENSXETG00000001997	lsm14b	99	76.667	ENSACAG00000016195	LSM14B	85	75.758	Anolis_carolinensis
ENSXETG00000001997	lsm14b	99	76.147	ENSANAG00000037915	LSM14B	86	73.569	Aotus_nancymaae
ENSXETG00000001997	lsm14b	99	50.000	ENSACLG00000019663	lsm14b	86	53.488	Astatotilapia_calliptera
ENSXETG00000001997	lsm14b	100	61.318	ENSAMXG00000002865	lsm14b	86	62.500	Astyanax_mexicanus
ENSXETG00000001997	lsm14b	99	74.114	ENSBTAG00000021558	LSM14B	86	73.297	Bos_taurus
ENSXETG00000001997	lsm14b	99	76.758	ENSCJAG00000014434	LSM14B	86	74.114	Callithrix_jacchus
ENSXETG00000001997	lsm14b	89	69.394	ENSCAFG00000012518	LSM14B	84	71.818	Canis_familiaris
ENSXETG00000001997	lsm14b	99	76.453	ENSCAFG00020022150	LSM14B	86	74.387	Canis_lupus_dingo
ENSXETG00000001997	lsm14b	99	76.453	ENSCHIG00000010284	-	86	74.114	Capra_hircus
ENSXETG00000001997	lsm14b	99	57.440	ENSCHIG00000022681	-	84	56.548	Capra_hircus
ENSXETG00000001997	lsm14b	87	74.216	ENSTSYG00000031914	LSM14B	74	73.171	Carlito_syrichta
ENSXETG00000001997	lsm14b	88	75.000	ENSCAPG00000013059	LSM14B	83	73.958	Cavia_aperea
ENSXETG00000001997	lsm14b	87	75.261	ENSCPOG00000038080	LSM14B	83	74.216	Cavia_porcellus
ENSXETG00000001997	lsm14b	99	76.147	ENSCCAG00000021267	LSM14B	78	83.051	Cebus_capucinus
ENSXETG00000001997	lsm14b	99	51.672	ENSCCAG00000024900	-	80	53.360	Cebus_capucinus
ENSXETG00000001997	lsm14b	99	76.758	ENSCATG00000036006	LSM14B	86	74.114	Cercocebus_atys
ENSXETG00000001997	lsm14b	87	73.519	ENSCLAG00000003186	LSM14B	83	72.822	Chinchilla_lanigera
ENSXETG00000001997	lsm14b	99	75.477	ENSCSAG00000015729	LSM14B	86	74.659	Chlorocebus_sabaeus
ENSXETG00000001997	lsm14b	67	55.061	ENSCHOG00000006997	-	78	53.846	Choloepus_hoffmanni
ENSXETG00000001997	lsm14b	99	74.797	ENSCPBG00000027065	LSM14B	86	76.423	Chrysemys_picta_bellii
ENSXETG00000001997	lsm14b	87	73.868	ENSCANG00000036986	LSM14B	83	73.171	Colobus_angolensis_palliatus
ENSXETG00000001997	lsm14b	99	76.758	ENSCGRG00001018399	Lsm14b	84	75.841	Cricetulus_griseus_chok1gshd
ENSXETG00000001997	lsm14b	57	59.358	ENSCGRG00000002484	-	73	54.545	Cricetulus_griseus_crigri
ENSXETG00000001997	lsm14b	68	68.924	ENSCGRG00000006111	-	83	67.729	Cricetulus_griseus_crigri
ENSXETG00000001997	lsm14b	100	45.272	ENSCSEG00000020669	LSM14B	87	44.540	Cynoglossus_semilaevis
ENSXETG00000001997	lsm14b	99	51.775	ENSCSEG00000004722	lsm14b	86	51.775	Cynoglossus_semilaevis
ENSXETG00000001997	lsm14b	63	32.057	ENSCVAG00000012433	-	73	31.579	Cyprinodon_variegatus
ENSXETG00000001997	lsm14b	100	58.580	ENSDARG00000025386	lsm14b	86	56.287	Danio_rerio
ENSXETG00000001997	lsm14b	68	68.526	ENSDNOG00000025246	LSM14B	81	67.331	Dasypus_novemcinctus
ENSXETG00000001997	lsm14b	88	73.103	ENSDORG00000016683	Lsm14b	81	66.932	Dipodomys_ordii
ENSXETG00000001997	lsm14b	99	64.220	ENSETEG00000001869	-	85	61.162	Echinops_telfairi
ENSXETG00000001997	lsm14b	68	68.468	ENSETEG00000011188	-	100	67.241	Echinops_telfairi
ENSXETG00000001997	lsm14b	68	68.526	ENSEASG00005023218	LSM14B	81	65.098	Equus_asinus_asinus
ENSXETG00000001997	lsm14b	99	77.064	ENSECAG00000010659	LSM14B	84	76.147	Equus_caballus
ENSXETG00000001997	lsm14b	87	65.157	ENSEEUG00000007331	LSM14B	80	87.879	Erinaceus_europaeus
ENSXETG00000001997	lsm14b	99	53.593	ENSELUG00000016299	LSM14B	86	53.293	Esox_lucius
ENSXETG00000001997	lsm14b	100	62.018	ENSELUG00000005780	lsm14b	86	62.242	Esox_lucius
ENSXETG00000001997	lsm14b	99	76.147	ENSFCAG00000003248	LSM14B	84	75.535	Felis_catus
ENSXETG00000001997	lsm14b	89	75.976	ENSFALG00000010618	LSM14B	85	75.075	Ficedula_albicollis
ENSXETG00000001997	lsm14b	87	73.519	ENSFDAG00000002214	LSM14B	83	72.474	Fukomys_damarensis
ENSXETG00000001997	lsm14b	99	51.613	ENSFHEG00000006237	lsm14b	85	50.877	Fundulus_heteroclitus
ENSXETG00000001997	lsm14b	95	42.899	ENSFHEG00000003362	LSM14B	73	49.135	Fundulus_heteroclitus
ENSXETG00000001997	lsm14b	99	50.456	ENSGMOG00000017115	lsm14b	83	51.220	Gadus_morhua
ENSXETG00000001997	lsm14b	99	78.078	ENSGALG00000005125	LSM14B	87	77.212	Gallus_gallus
ENSXETG00000001997	lsm14b	99	47.965	ENSGAFG00000020318	lsm14b	68	73.188	Gambusia_affinis
ENSXETG00000001997	lsm14b	63	38.164	ENSGAFG00000013723	LSM14B	74	35.885	Gambusia_affinis
ENSXETG00000001997	lsm14b	99	53.846	ENSGACG00000009973	lsm14b	86	53.846	Gasterosteus_aculeatus
ENSXETG00000001997	lsm14b	57	70.213	ENSGAGG00000004106	LSM14B	74	67.010	Gopherus_agassizii
ENSXETG00000001997	lsm14b	89	73.720	ENSGGOG00000005630	LSM14B	80	72.696	Gorilla_gorilla
ENSXETG00000001997	lsm14b	99	76.453	ENSHGLG00000015055	LSM14B	84	75.535	Heterocephalus_glaber_female
ENSXETG00000001997	lsm14b	87	71.777	ENSHGLG00100015273	LSM14B	83	70.732	Heterocephalus_glaber_male
ENSXETG00000001997	lsm14b	100	49.853	ENSHCOG00000018747	LSM14B	87	49.853	Hippocampus_comes
ENSXETG00000001997	lsm14b	64	43.062	ENSHCOG00000004867	lsm14b	73	41.627	Hippocampus_comes
ENSXETG00000001997	lsm14b	100	61.383	ENSIPUG00000014946	lsm14b	81	61.383	Ictalurus_punctatus
ENSXETG00000001997	lsm14b	87	74.913	ENSSTOG00000020482	LSM14B	83	73.868	Ictidomys_tridecemlineatus
ENSXETG00000001997	lsm14b	99	76.923	ENSJJAG00000012728	Lsm14b	84	76.000	Jaculus_jaculus
ENSXETG00000001997	lsm14b	99	54.519	ENSKMAG00000017524	lsm14b	86	52.616	Kryptolebias_marmoratus
ENSXETG00000001997	lsm14b	52	40.000	ENSKMAG00000012834	-	76	38.378	Kryptolebias_marmoratus
ENSXETG00000001997	lsm14b	64	34.597	ENSLBEG00000007951	LSM14B	76	35.981	Labrus_bergylta
ENSXETG00000001997	lsm14b	100	71.968	ENSLACG00000003849	LSM14B	87	70.292	Latimeria_chalumnae
ENSXETG00000001997	lsm14b	100	63.717	ENSLOCG00000003746	lsm14b	86	63.422	Lepisosteus_oculatus
ENSXETG00000001997	lsm14b	88	73.883	ENSLAFG00000007492	LSM14B	84	72.852	Loxodonta_africana
ENSXETG00000001997	lsm14b	99	77.370	ENSMFAG00000041479	LSM14B	86	74.659	Macaca_fascicularis
ENSXETG00000001997	lsm14b	99	77.370	ENSMMUG00000014084	LSM14B	80	83.051	Macaca_mulatta
ENSXETG00000001997	lsm14b	99	77.370	ENSMNEG00000045573	LSM14B	80	83.051	Macaca_nemestrina
ENSXETG00000001997	lsm14b	87	74.216	ENSMLEG00000040895	LSM14B	83	73.171	Mandrillus_leucophaeus
ENSXETG00000001997	lsm14b	100	50.445	ENSMAMG00000024124	LSM14B	86	50.445	Mastacembelus_armatus
ENSXETG00000001997	lsm14b	99	53.550	ENSMAMG00000020539	lsm14b	85	53.550	Mastacembelus_armatus
ENSXETG00000001997	lsm14b	99	51.613	ENSMZEG00005000987	lsm14b	85	53.779	Maylandia_zebra
ENSXETG00000001997	lsm14b	97	44.675	ENSMZEG00005026001	LSM14B	87	45.723	Maylandia_zebra
ENSXETG00000001997	lsm14b	90	72.667	ENSMGAG00000005300	LSM14B	84	73.333	Meleagris_gallopavo
ENSXETG00000001997	lsm14b	99	76.147	ENSMAUG00000020700	Lsm14b	84	75.229	Mesocricetus_auratus
ENSXETG00000001997	lsm14b	99	78.593	ENSMICG00000014675	LSM14B	83	84.571	Microcebus_murinus
ENSXETG00000001997	lsm14b	99	76.147	ENSMOCG00000020600	Lsm14b	84	75.229	Microtus_ochrogaster
ENSXETG00000001997	lsm14b	68	56.175	ENSMOCG00000005119	-	83	56.175	Microtus_ochrogaster
ENSXETG00000001997	lsm14b	100	49.848	ENSMMOG00000017321	LSM14B	86	49.848	Mola_mola
ENSXETG00000001997	lsm14b	99	51.852	ENSMMOG00000020042	lsm14b	88	52.853	Mola_mola
ENSXETG00000001997	lsm14b	68	70.120	ENSMODG00000016690	LSM14B	81	69.323	Monodelphis_domestica
ENSXETG00000001997	lsm14b	99	49.704	ENSMALG00000022251	LSM14B	85	48.817	Monopterus_albus
ENSXETG00000001997	lsm14b	99	54.573	ENSMALG00000004783	lsm14b	85	50.893	Monopterus_albus
ENSXETG00000001997	lsm14b	99	76.758	MGP_CAROLIEiJ_G0024770	Lsm14b	86	74.387	Mus_caroli
ENSXETG00000001997	lsm14b	99	76.758	ENSMUSG00000039108	Lsm14b	84	75.841	Mus_musculus
ENSXETG00000001997	lsm14b	99	76.453	MGP_PahariEiJ_G0026214	Lsm14b	86	74.114	Mus_pahari
ENSXETG00000001997	lsm14b	99	76.758	MGP_SPRETEiJ_G0025693	Lsm14b	86	74.387	Mus_spretus
ENSXETG00000001997	lsm14b	94	68.481	ENSMPUG00000007584	LSM14B	86	70.774	Mustela_putorius_furo
ENSXETG00000001997	lsm14b	99	77.744	ENSMLUG00000000304	LSM14B	84	76.829	Myotis_lucifugus
ENSXETG00000001997	lsm14b	53	65.909	ENSNGAG00000016550	Lsm14b	75	64.205	Nannospalax_galili
ENSXETG00000001997	lsm14b	87	74.913	ENSNLEG00000015757	LSM14B	83	73.868	Nomascus_leucogenys
ENSXETG00000001997	lsm14b	55	70.349	ENSMEUG00000006305	-	84	73.837	Notamacropus_eugenii
ENSXETG00000001997	lsm14b	72	90.647	ENSMEUG00000008267	-	61	90.647	Notamacropus_eugenii
ENSXETG00000001997	lsm14b	99	76.758	ENSODEG00000004099	LSM14B	84	75.841	Octodon_degus
ENSXETG00000001997	lsm14b	99	50.575	ENSONIG00000020318	lsm14b	86	54.179	Oreochromis_niloticus
ENSXETG00000001997	lsm14b	84	74.182	ENSOANG00000003370	LSM14B	97	73.358	Ornithorhynchus_anatinus
ENSXETG00000001997	lsm14b	88	72.664	ENSOCUG00000006279	LSM14B	83	71.972	Oryctolagus_cuniculus
ENSXETG00000001997	lsm14b	99	45.562	ENSORLG00000028353	LSM14B	86	43.413	Oryzias_latipes
ENSXETG00000001997	lsm14b	99	51.026	ENSORLG00000013525	lsm14b	85	52.786	Oryzias_latipes
ENSXETG00000001997	lsm14b	67	31.984	ENSORLG00020018191	-	76	32.203	Oryzias_latipes_hni
ENSXETG00000001997	lsm14b	99	50.733	ENSORLG00020020553	lsm14b	85	52.493	Oryzias_latipes_hni
ENSXETG00000001997	lsm14b	99	46.471	ENSORLG00015013157	LSM14B	86	43.413	Oryzias_latipes_hsok
ENSXETG00000001997	lsm14b	99	50.733	ENSORLG00015016862	lsm14b	85	52.493	Oryzias_latipes_hsok
ENSXETG00000001997	lsm14b	63	33.816	ENSOMEG00000000171	-	73	34.300	Oryzias_melastigma
ENSXETG00000001997	lsm14b	99	50.733	ENSOMEG00000023917	lsm14b	85	52.493	Oryzias_melastigma
ENSXETG00000001997	lsm14b	99	76.022	ENSOGAG00000003915	LSM14B	86	75.204	Otolemur_garnettii
ENSXETG00000001997	lsm14b	89	72.256	ENSOARG00000014706	LSM14B	83	71.341	Ovis_aries
ENSXETG00000001997	lsm14b	89	73.720	ENSPPAG00000035799	LSM14B	76	79.562	Pan_paniscus
ENSXETG00000001997	lsm14b	99	76.147	ENSPPRG00000009197	LSM14B	84	75.535	Panthera_pardus
ENSXETG00000001997	lsm14b	68	63.745	ENSPTIG00000021518	LSM14B	84	66.932	Panthera_tigris_altaica
ENSXETG00000001997	lsm14b	99	77.370	ENSPTRG00000013696	LSM14B	80	83.051	Pan_troglodytes
ENSXETG00000001997	lsm14b	99	77.064	ENSPANG00000011747	LSM14B	80	83.051	Papio_anubis
ENSXETG00000001997	lsm14b	100	64.157	ENSPKIG00000003275	lsm14b	99	80.734	Paramormyrops_kingsleyae
ENSXETG00000001997	lsm14b	88	76.271	ENSPSIG00000014762	LSM14B	84	75.254	Pelodiscus_sinensis
ENSXETG00000001997	lsm14b	99	76.994	ENSPEMG00000017688	Lsm14b	85	76.074	Peromyscus_maniculatus_bairdii
ENSXETG00000001997	lsm14b	99	78.287	ENSPCIG00000013405	LSM14B	84	77.576	Phascolarctos_cinereus
ENSXETG00000001997	lsm14b	99	51.622	ENSPFOG00000005631	lsm14b	84	51.765	Poecilia_formosa
ENSXETG00000001997	lsm14b	99	51.917	ENSPLAG00000002449	lsm14b	85	50.585	Poecilia_latipinna
ENSXETG00000001997	lsm14b	99	46.386	ENSPLAG00000005793	LSM14B	84	44.545	Poecilia_latipinna
ENSXETG00000001997	lsm14b	99	45.970	ENSPMEG00000022953	LSM14B	84	44.545	Poecilia_mexicana
ENSXETG00000001997	lsm14b	99	51.622	ENSPMEG00000000745	lsm14b	85	51.320	Poecilia_mexicana
ENSXETG00000001997	lsm14b	67	31.984	ENSPREG00000007828	LSM14B	76	33.778	Poecilia_reticulata
ENSXETG00000001997	lsm14b	99	65.976	ENSPPYG00000011194	LSM14B	84	63.661	Pongo_abelii
ENSXETG00000001997	lsm14b	53	94.872	ENSPCAG00000011831	-	72	74.490	Procavia_capensis
ENSXETG00000001997	lsm14b	99	78.287	ENSPCOG00000013625	LSM14B	80	84.571	Propithecus_coquereli
ENSXETG00000001997	lsm14b	79	52.055	ENSPVAG00000017918	LSM14B	81	58.915	Pteropus_vampyrus
ENSXETG00000001997	lsm14b	100	61.652	ENSPNAG00000012777	lsm14b	86	61.834	Pygocentrus_nattereri
ENSXETG00000001997	lsm14b	99	75.749	ENSRNOG00000054557	Lsm14b	86	75.204	Rattus_norvegicus
ENSXETG00000001997	lsm14b	88	73.958	ENSRBIG00000033461	LSM14B	83	73.264	Rhinopithecus_bieti
ENSXETG00000001997	lsm14b	89	74.830	ENSRROG00000042949	LSM14B	76	74.150	Rhinopithecus_roxellana
ENSXETG00000001997	lsm14b	87	73.519	ENSSBOG00000032820	LSM14B	76	79.562	Saimiri_boliviensis_boliviensis
ENSXETG00000001997	lsm14b	88	75.945	ENSSHAG00000015528	LSM14B	80	74.490	Sarcophilus_harrisii
ENSXETG00000001997	lsm14b	100	58.876	ENSSFOG00015004627	lsm14b	86	60.767	Scleropages_formosus
ENSXETG00000001997	lsm14b	99	52.632	ENSSMAG00000012725	lsm14b	85	51.176	Scophthalmus_maximus
ENSXETG00000001997	lsm14b	99	50.445	ENSSMAG00000000135	LSM14B	85	50.742	Scophthalmus_maximus
ENSXETG00000001997	lsm14b	99	53.801	ENSSDUG00000020977	lsm14b	85	54.094	Seriola_dumerili
ENSXETG00000001997	lsm14b	100	51.744	ENSSDUG00000022770	LSM14B	86	51.744	Seriola_dumerili
ENSXETG00000001997	lsm14b	68	35.521	ENSSLDG00000011354	-	81	37.021	Seriola_lalandi_dorsalis
ENSXETG00000001997	lsm14b	57	65.263	ENSSARG00000007749	-	90	60.000	Sorex_araneus
ENSXETG00000001997	lsm14b	100	78.485	ENSSPUG00000014360	LSM14B	93	78.485	Sphenodon_punctatus
ENSXETG00000001997	lsm14b	52	35.784	ENSSPAG00000018854	-	61	40.113	Stegastes_partitus
ENSXETG00000001997	lsm14b	99	55.521	ENSSPAG00000020915	lsm14b	84	54.381	Stegastes_partitus
ENSXETG00000001997	lsm14b	99	76.453	ENSSSCG00000026052	LSM14B	81	66.534	Sus_scrofa
ENSXETG00000001997	lsm14b	88	77.816	ENSTGUG00000007884	LSM14B	84	76.792	Taeniopygia_guttata
ENSXETG00000001997	lsm14b	99	52.959	ENSTRUG00000011354	lsm14b	85	50.729	Takifugu_rubripes
ENSXETG00000001997	lsm14b	100	49.709	ENSTRUG00000001529	LSM14B	86	49.709	Takifugu_rubripes
ENSXETG00000001997	lsm14b	99	54.242	ENSTNIG00000002445	lsm14b	84	53.211	Tetraodon_nigroviridis
ENSXETG00000001997	lsm14b	82	94.872	ENSTTRG00000011043	LSM14B	84	50.543	Tursiops_truncatus
ENSXETG00000001997	lsm14b	97	69.159	ENSUAMG00000025298	LSM14B	85	67.867	Ursus_americanus
ENSXETG00000001997	lsm14b	97	69.159	ENSUMAG00000000480	LSM14B	85	67.867	Ursus_maritimus
ENSXETG00000001997	lsm14b	88	73.103	ENSVVUG00000015920	LSM14B	82	72.414	Vulpes_vulpes
ENSXETG00000001997	lsm14b	99	49.560	ENSXMAG00000010013	lsm14b	85	48.276	Xiphophorus_maculatus