EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002030 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: -
Full Name: pseudouridylate synthase 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5128 bases
Position: chrGL172648.1:943917-949044
Accession: XB-GENE-963672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004347	PseudoU_synth_1	PF01416.20	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004347	-	1886	-	ENSXETP00000004347	399 (aa)	XP_002931922	F6QV98

Gene Model

Click here to download ENSXETG00000002030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002030	pus1	80	47.022	ENSXETG00000033640	-	99	47.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002030	pus1	93	71.390	ENSG00000177192	PUS1	93	73.816	Homo_sapiens
ENSXETG00000002030	pus1	89	66.944	ENSAPOG00000007254	pus1	86	66.944	Acanthochromis_polyacanthus
ENSXETG00000002030	pus1	85	75.221	ENSAMEG00000013715	PUS1	83	75.221	Ailuropoda_melanoleuca
ENSXETG00000002030	pus1	93	64.230	ENSACIG00000009169	pus1	93	64.230	Amphilophus_citrinellus
ENSXETG00000002030	pus1	88	69.688	ENSAOCG00000022207	pus1	84	69.688	Amphiprion_ocellaris
ENSXETG00000002030	pus1	88	69.688	ENSAPEG00000006039	pus1	90	69.688	Amphiprion_percula
ENSXETG00000002030	pus1	92	65.416	ENSATEG00000020688	pus1	95	65.416	Anabas_testudineus
ENSXETG00000002030	pus1	88	73.088	ENSACAG00000007367	PUS1	95	73.088	Anolis_carolinensis
ENSXETG00000002030	pus1	76	75.578	ENSANAG00000036192	PUS1	93	75.578	Aotus_nancymaae
ENSXETG00000002030	pus1	90	67.218	ENSACLG00000020868	pus1	93	67.218	Astatotilapia_calliptera
ENSXETG00000002030	pus1	88	71.186	ENSAMXG00000008710	pus1	82	71.186	Astyanax_mexicanus
ENSXETG00000002030	pus1	92	70.732	ENSBTAG00000012990	PUS1	92	70.732	Bos_taurus
ENSXETG00000002030	pus1	81	41.108	WBGene00004248	pus-1	81	41.108	Caenorhabditis_elegans
ENSXETG00000002030	pus1	64	74.409	ENSCJAG00000003720	PUS1	70	74.031	Callithrix_jacchus
ENSXETG00000002030	pus1	96	65.347	ENSCAFG00000006429	PUS1	99	65.347	Canis_familiaris
ENSXETG00000002030	pus1	99	64.096	ENSCAFG00020010737	PUS1	95	64.096	Canis_lupus_dingo
ENSXETG00000002030	pus1	92	70.461	ENSCHIG00000000487	PUS1	92	70.461	Capra_hircus
ENSXETG00000002030	pus1	85	74.118	ENSTSYG00000032605	PUS1	93	73.623	Carlito_syrichta
ENSXETG00000002030	pus1	75	75.839	ENSCAPG00000006421	PUS1	94	75.248	Cavia_aperea
ENSXETG00000002030	pus1	81	76.308	ENSCPOG00000001027	PUS1	81	73.276	Cavia_porcellus
ENSXETG00000002030	pus1	90	72.778	ENSCCAG00000015879	PUS1	89	73.438	Cebus_capucinus
ENSXETG00000002030	pus1	90	73.611	ENSCATG00000032870	PUS1	88	74.062	Cercocebus_atys
ENSXETG00000002030	pus1	81	75.692	ENSCLAG00000011689	PUS1	82	71.875	Chinchilla_lanigera
ENSXETG00000002030	pus1	90	73.333	ENSCSAG00000001879	PUS1	84	73.333	Chlorocebus_sabaeus
ENSXETG00000002030	pus1	78	79.553	ENSCPBG00000024715	PUS1	89	79.553	Chrysemys_picta_bellii
ENSXETG00000002030	pus1	81	46.154	ENSCING00000009426	-	87	46.154	Ciona_intestinalis
ENSXETG00000002030	pus1	81	44.615	ENSCSAVG00000003751	-	67	44.615	Ciona_savignyi
ENSXETG00000002030	pus1	90	65.000	ENSCANG00000035561	PUS1	88	66.978	Colobus_angolensis_palliatus
ENSXETG00000002030	pus1	90	70.833	ENSCGRG00001019592	Pus1	85	70.833	Cricetulus_griseus_chok1gshd
ENSXETG00000002030	pus1	90	70.833	ENSCGRG00000004048	Pus1	92	70.833	Cricetulus_griseus_crigri
ENSXETG00000002030	pus1	91	65.489	ENSCSEG00000003629	pus1	87	66.484	Cynoglossus_semilaevis
ENSXETG00000002030	pus1	94	64.362	ENSCVAG00000001265	pus1	91	64.362	Cyprinodon_variegatus
ENSXETG00000002030	pus1	92	65.574	ENSDARG00000045562	pus1	96	67.407	Danio_rerio
ENSXETG00000002030	pus1	83	74.096	ENSDNOG00000045576	PUS1	93	74.342	Dasypus_novemcinctus
ENSXETG00000002030	pus1	82	71.865	ENSDORG00000011455	Pus1	100	71.865	Dipodomys_ordii
ENSXETG00000002030	pus1	80	47.077	FBgn0038811	PUS1	78	47.077	Drosophila_melanogaster
ENSXETG00000002030	pus1	85	71.554	ENSETEG00000019160	PUS1	85	71.098	Echinops_telfairi
ENSXETG00000002030	pus1	86	42.400	ENSEBUG00000000368	-	65	42.776	Eptatretus_burgeri
ENSXETG00000002030	pus1	86	73.121	ENSEASG00005016535	PUS1	80	73.121	Equus_asinus_asinus
ENSXETG00000002030	pus1	86	73.121	ENSECAG00000006965	PUS1	87	73.121	Equus_caballus
ENSXETG00000002030	pus1	88	69.774	ENSELUG00000010424	pus1	90	69.774	Esox_lucius
ENSXETG00000002030	pus1	86	74.128	ENSFCAG00000010780	PUS1	81	74.128	Felis_catus
ENSXETG00000002030	pus1	88	76.338	ENSFALG00000008273	PUS1	83	76.338	Ficedula_albicollis
ENSXETG00000002030	pus1	83	75.758	ENSFDAG00000012518	PUS1	80	75.758	Fukomys_damarensis
ENSXETG00000002030	pus1	94	64.908	ENSFHEG00000010504	pus1	91	64.908	Fundulus_heteroclitus
ENSXETG00000002030	pus1	89	66.295	ENSGMOG00000008143	pus1	92	66.295	Gadus_morhua
ENSXETG00000002030	pus1	88	75.140	ENSGALG00000002354	PUS1	90	73.243	Gallus_gallus
ENSXETG00000002030	pus1	94	65.435	ENSGAFG00000006578	pus1	91	65.435	Gambusia_affinis
ENSXETG00000002030	pus1	90	66.120	ENSGACG00000017566	pus1	93	66.120	Gasterosteus_aculeatus
ENSXETG00000002030	pus1	79	78.683	ENSGAGG00000016730	-	90	79.553	Gopherus_agassizii
ENSXETG00000002030	pus1	90	73.611	ENSGGOG00000009178	PUS1	86	74.688	Gorilla_gorilla
ENSXETG00000002030	pus1	90	67.493	ENSHBUG00000001316	pus1	93	67.493	Haplochromis_burtoni
ENSXETG00000002030	pus1	83	72.727	ENSHGLG00000016086	PUS1	85	72.727	Heterocephalus_glaber_female
ENSXETG00000002030	pus1	83	72.424	ENSHGLG00100019362	PUS1	85	72.424	Heterocephalus_glaber_male
ENSXETG00000002030	pus1	89	66.667	ENSHCOG00000014288	pus1	82	66.667	Hippocampus_comes
ENSXETG00000002030	pus1	88	72.571	ENSIPUG00000010387	pus1	88	72.443	Ictalurus_punctatus
ENSXETG00000002030	pus1	83	75.676	ENSSTOG00000011245	PUS1	82	72.989	Ictidomys_tridecemlineatus
ENSXETG00000002030	pus1	90	71.667	ENSJJAG00000000088	Pus1	85	71.667	Jaculus_jaculus
ENSXETG00000002030	pus1	89	66.852	ENSKMAG00000012702	pus1	86	66.852	Kryptolebias_marmoratus
ENSXETG00000002030	pus1	91	64.130	ENSLBEG00000002845	pus1	91	64.130	Labrus_bergylta
ENSXETG00000002030	pus1	83	56.364	ENSLACG00000016044	-	100	56.364	Latimeria_chalumnae
ENSXETG00000002030	pus1	93	71.011	ENSLACG00000018598	PUS1	99	68.486	Latimeria_chalumnae
ENSXETG00000002030	pus1	88	75.070	ENSLOCG00000006127	pus1	90	75.070	Lepisosteus_oculatus
ENSXETG00000002030	pus1	92	67.209	ENSLAFG00000028731	PUS1	99	67.209	Loxodonta_africana
ENSXETG00000002030	pus1	90	73.333	ENSMFAG00000041194	PUS1	90	73.333	Macaca_fascicularis
ENSXETG00000002030	pus1	92	72.087	ENSMMUG00000031463	PUS1	89	75.942	Macaca_mulatta
ENSXETG00000002030	pus1	90	73.333	ENSMNEG00000002814	PUS1	88	73.750	Macaca_nemestrina
ENSXETG00000002030	pus1	80	73.899	ENSMLEG00000043560	PUS1	98	73.899	Mandrillus_leucophaeus
ENSXETG00000002030	pus1	92	64.879	ENSMAMG00000007371	pus1	89	64.879	Mastacembelus_armatus
ENSXETG00000002030	pus1	90	67.493	ENSMZEG00005017746	pus1	86	67.493	Maylandia_zebra
ENSXETG00000002030	pus1	79	74.766	ENSMGAG00000001958	PUS1	98	74.766	Meleagris_gallopavo
ENSXETG00000002030	pus1	86	73.547	ENSMAUG00000001482	Pus1	81	73.547	Mesocricetus_auratus
ENSXETG00000002030	pus1	86	74.709	ENSMICG00000030980	PUS1	86	74.709	Microcebus_murinus
ENSXETG00000002030	pus1	90	71.667	ENSMOCG00000022311	Pus1	85	71.667	Microtus_ochrogaster
ENSXETG00000002030	pus1	92	65.499	ENSMMOG00000021022	pus1	95	65.499	Mola_mola
ENSXETG00000002030	pus1	82	76.829	ENSMODG00000015551	PUS1	78	75.145	Monodelphis_domestica
ENSXETG00000002030	pus1	89	64.932	ENSMALG00000013202	pus1	87	64.932	Monopterus_albus
ENSXETG00000002030	pus1	90	71.389	MGP_CAROLIEiJ_G0027551	Pus1	92	71.389	Mus_caroli
ENSXETG00000002030	pus1	90	71.389	ENSMUSG00000029507	Pus1	92	71.389	Mus_musculus
ENSXETG00000002030	pus1	90	71.389	MGP_PahariEiJ_G0024133	Pus1	92	71.389	Mus_pahari
ENSXETG00000002030	pus1	90	71.389	MGP_SPRETEiJ_G0028549	Pus1	92	71.389	Mus_spretus
ENSXETG00000002030	pus1	90	71.309	ENSMPUG00000002314	PUS1	90	71.309	Mustela_putorius_furo
ENSXETG00000002030	pus1	82	74.085	ENSMLUG00000015790	PUS1	90	74.085	Myotis_lucifugus
ENSXETG00000002030	pus1	86	74.493	ENSNGAG00000012976	Pus1	82	74.493	Nannospalax_galili
ENSXETG00000002030	pus1	90	67.769	ENSNBRG00000020502	pus1	98	67.769	Neolamprologus_brichardi
ENSXETG00000002030	pus1	90	70.556	ENSNLEG00000008505	PUS1	97	73.139	Nomascus_leucogenys
ENSXETG00000002030	pus1	85	68.529	ENSMEUG00000002825	PUS1	92	68.529	Notamacropus_eugenii
ENSXETG00000002030	pus1	85	64.602	ENSOPRG00000002701	-	89	64.602	Ochotona_princeps
ENSXETG00000002030	pus1	87	73.199	ENSODEG00000008248	PUS1	92	73.199	Octodon_degus
ENSXETG00000002030	pus1	90	66.304	ENSONIG00000003803	pus1	93	66.304	Oreochromis_niloticus
ENSXETG00000002030	pus1	91	72.358	ENSOANG00000010619	PUS1	92	68.579	Ornithorhynchus_anatinus
ENSXETG00000002030	pus1	84	74.030	ENSOCUG00000007310	PUS1	74	73.235	Oryctolagus_cuniculus
ENSXETG00000002030	pus1	86	67.919	ENSORLG00000010787	pus1	83	67.919	Oryzias_latipes
ENSXETG00000002030	pus1	86	67.919	ENSORLG00020011483	pus1	83	67.919	Oryzias_latipes_hni
ENSXETG00000002030	pus1	86	67.919	ENSORLG00015023012	pus1	89	67.919	Oryzias_latipes_hsok
ENSXETG00000002030	pus1	89	67.039	ENSOMEG00000022655	pus1	84	67.039	Oryzias_melastigma
ENSXETG00000002030	pus1	91	73.077	ENSOGAG00000008720	PUS1	95	73.077	Otolemur_garnettii
ENSXETG00000002030	pus1	92	70.190	ENSOARG00000013316	PUS1	85	70.190	Ovis_aries
ENSXETG00000002030	pus1	90	73.333	ENSPPAG00000040971	PUS1	86	74.062	Pan_paniscus
ENSXETG00000002030	pus1	93	70.053	ENSPPRG00000015456	PUS1	92	70.053	Panthera_pardus
ENSXETG00000002030	pus1	85	74.194	ENSPTIG00000004201	PUS1	90	74.128	Panthera_tigris_altaica
ENSXETG00000002030	pus1	90	73.333	ENSPTRG00000005643	PUS1	86	74.062	Pan_troglodytes
ENSXETG00000002030	pus1	90	73.333	ENSPANG00000000376	PUS1	88	73.750	Papio_anubis
ENSXETG00000002030	pus1	90	69.890	ENSPKIG00000019369	pus1	82	69.890	Paramormyrops_kingsleyae
ENSXETG00000002030	pus1	95	73.913	ENSPSIG00000016432	PUS1	95	71.990	Pelodiscus_sinensis
ENSXETG00000002030	pus1	90	67.127	ENSPMGG00000004522	pus1	94	67.127	Periophthalmus_magnuspinnatus
ENSXETG00000002030	pus1	87	72.414	ENSPEMG00000013448	Pus1	82	72.414	Peromyscus_maniculatus_bairdii
ENSXETG00000002030	pus1	82	59.327	ENSPMAG00000004636	pus1	99	59.327	Petromyzon_marinus
ENSXETG00000002030	pus1	66	74.809	ENSPCIG00000022609	-	67	71.530	Phascolarctos_cinereus
ENSXETG00000002030	pus1	94	65.526	ENSPFOG00000019669	pus1	91	65.526	Poecilia_formosa
ENSXETG00000002030	pus1	94	65.789	ENSPLAG00000002692	-	91	65.789	Poecilia_latipinna
ENSXETG00000002030	pus1	94	65.789	ENSPLAG00000007185	pus1	91	65.789	Poecilia_latipinna
ENSXETG00000002030	pus1	91	66.396	ENSPMEG00000011115	PUS1	91	65.526	Poecilia_mexicana
ENSXETG00000002030	pus1	91	66.396	ENSPMEG00000006038	pus1	91	66.396	Poecilia_mexicana
ENSXETG00000002030	pus1	91	65.854	ENSPREG00000007231	pus1	95	68.513	Poecilia_reticulata
ENSXETG00000002030	pus1	90	73.333	ENSPPYG00000005132	PUS1	85	73.333	Pongo_abelii
ENSXETG00000002030	pus1	67	65.799	ENSPCAG00000009110	-	64	65.799	Procavia_capensis
ENSXETG00000002030	pus1	80	70.440	ENSPCOG00000015595	PUS1	84	67.449	Propithecus_coquereli
ENSXETG00000002030	pus1	90	67.218	ENSPNYG00000013571	pus1	86	67.218	Pundamilia_nyererei
ENSXETG00000002030	pus1	89	69.916	ENSPNAG00000003938	pus1	85	69.916	Pygocentrus_nattereri
ENSXETG00000002030	pus1	90	70.833	ENSRNOG00000037500	Pus1	85	70.833	Rattus_norvegicus
ENSXETG00000002030	pus1	90	73.056	ENSRBIG00000043177	PUS1	90	73.056	Rhinopithecus_bieti
ENSXETG00000002030	pus1	90	72.500	ENSRROG00000039744	PUS1	87	72.297	Rhinopithecus_roxellana
ENSXETG00000002030	pus1	77	44.615	YPL212C	-	56	44.615	Saccharomyces_cerevisiae
ENSXETG00000002030	pus1	66	32.209	YGL063W	-	86	32.209	Saccharomyces_cerevisiae
ENSXETG00000002030	pus1	86	75.145	ENSSBOG00000023593	PUS1	87	75.908	Saimiri_boliviensis_boliviensis
ENSXETG00000002030	pus1	89	75.698	ENSSHAG00000013193	PUS1	85	76.945	Sarcophilus_harrisii
ENSXETG00000002030	pus1	87	71.186	ENSSFOG00015003463	pus1	83	69.399	Scleropages_formosus
ENSXETG00000002030	pus1	91	66.027	ENSSMAG00000019075	pus1	89	64.721	Scophthalmus_maximus
ENSXETG00000002030	pus1	91	65.583	ENSSDUG00000007102	pus1	88	65.583	Seriola_dumerili
ENSXETG00000002030	pus1	91	65.041	ENSSLDG00000022850	pus1	88	65.041	Seriola_lalandi_dorsalis
ENSXETG00000002030	pus1	76	64.686	ENSSARG00000008367	PUS1	98	64.686	Sorex_araneus
ENSXETG00000002030	pus1	87	77.208	ENSSPUG00000010009	PUS1	88	77.208	Sphenodon_punctatus
ENSXETG00000002030	pus1	89	63.788	ENSSPAG00000006272	pus1	91	63.788	Stegastes_partitus
ENSXETG00000002030	pus1	86	74.128	ENSSSCG00000009741	PUS1	86	74.128	Sus_scrofa
ENSXETG00000002030	pus1	83	78.788	ENSTGUG00000008068	PUS1	100	78.788	Taeniopygia_guttata
ENSXETG00000002030	pus1	88	65.439	ENSTRUG00000002198	pus1	89	66.092	Takifugu_rubripes
ENSXETG00000002030	pus1	88	63.944	ENSTNIG00000003942	pus1	90	64.225	Tetraodon_nigroviridis
ENSXETG00000002030	pus1	86	72.674	ENSTTRG00000000632	PUS1	82	72.674	Tursiops_truncatus
ENSXETG00000002030	pus1	85	74.926	ENSUAMG00000017197	PUS1	86	74.926	Ursus_americanus
ENSXETG00000002030	pus1	85	75.221	ENSUMAG00000002831	PUS1	95	76.752	Ursus_maritimus
ENSXETG00000002030	pus1	90	68.800	ENSVVUG00000004199	PUS1	86	68.800	Vulpes_vulpes
ENSXETG00000002030	pus1	91	66.667	ENSXCOG00000004722	pus1	94	67.218	Xiphophorus_couchianus
ENSXETG00000002030	pus1	94	65.526	ENSXMAG00000000988	pus1	91	65.526	Xiphophorus_maculatus