EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002042 (Gene tree)
Gene ID: -
Gene Symbol: rnf113a
Alias: -
Full Name: Xenopus tropicalis ring finger protein 113A (rnf113a)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7611 bases
Position: chrGL172648.1:1098833-1106443
Accession: NM_001016034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004366	zf-CCCH	PF00642.24	1.7e-09	1	1
ENSXETP00000062799	zf-CCCH	PF00642.24	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064415	-	1021	-	ENSXETP00000062799	334 (aa)	-	F6VTQ5
ENSXETT00000004366	-	1045	-	ENSXETP00000004366	319 (aa)	-	Q28EQ7

Gene Model

Click here to download ENSXETG00000002042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002042	rnf113a	97	59.177	ENSG00000139797	RNF113B	96	58.750	Homo_sapiens
ENSXETG00000002042	rnf113a	99	70.448	ENSG00000125352	RNF113A	96	70.427	Homo_sapiens
ENSXETG00000002042	rnf113a	99	76.235	ENSAPOG00000017510	rnf113a	99	76.235	Acanthochromis_polyacanthus
ENSXETG00000002042	rnf113a	99	68.915	ENSAMEG00000019845	-	94	71.037	Ailuropoda_melanoleuca
ENSXETG00000002042	rnf113a	96	70.323	ENSACIG00000007458	rnf113a	96	71.704	Amphilophus_citrinellus
ENSXETG00000002042	rnf113a	99	76.235	ENSAOCG00000003485	rnf113a	99	76.235	Amphiprion_ocellaris
ENSXETG00000002042	rnf113a	99	75.926	ENSAPEG00000001084	rnf113a	99	75.926	Amphiprion_percula
ENSXETG00000002042	rnf113a	99	78.395	ENSATEG00000022950	rnf113a	99	78.395	Anabas_testudineus
ENSXETG00000002042	rnf113a	80	84.375	ENSAPLG00000012510	-	90	88.525	Anas_platyrhynchos
ENSXETG00000002042	rnf113a	91	76.949	ENSACAG00000012485	-	94	76.271	Anolis_carolinensis
ENSXETG00000002042	rnf113a	99	68.976	ENSANAG00000013925	-	96	69.605	Aotus_nancymaae
ENSXETG00000002042	rnf113a	95	60.714	ENSANAG00000020431	RNF113B	94	60.194	Aotus_nancymaae
ENSXETG00000002042	rnf113a	95	68.553	ENSANAG00000024332	-	95	70.126	Aotus_nancymaae
ENSXETG00000002042	rnf113a	96	76.752	ENSACLG00000025256	rnf113a	97	77.460	Astatotilapia_calliptera
ENSXETG00000002042	rnf113a	96	76.677	ENSAMXG00000011273	rnf113a	97	76.997	Astyanax_mexicanus
ENSXETG00000002042	rnf113a	99	63.557	ENSBTAG00000008684	-	98	62.391	Bos_taurus
ENSXETG00000002042	rnf113a	99	70.000	ENSBTAG00000006034	RNF113A	96	71.515	Bos_taurus
ENSXETG00000002042	rnf113a	92	46.179	WBGene00010476	rnf-113	83	44.892	Caenorhabditis_elegans
ENSXETG00000002042	rnf113a	99	68.657	ENSCJAG00000022327	RNF113A	98	68.358	Callithrix_jacchus
ENSXETG00000002042	rnf113a	97	61.146	ENSCJAG00000004501	RNF113B	96	60.635	Callithrix_jacchus
ENSXETG00000002042	rnf113a	99	68.529	ENSCAFG00000018430	-	98	68.529	Canis_familiaris
ENSXETG00000002042	rnf113a	97	59.327	ENSCAFG00000018373	-	93	61.162	Canis_familiaris
ENSXETG00000002042	rnf113a	99	68.529	ENSCAFG00020004044	-	98	68.529	Canis_lupus_dingo
ENSXETG00000002042	rnf113a	97	59.327	ENSCAFG00020020280	-	93	61.468	Canis_lupus_dingo
ENSXETG00000002042	rnf113a	99	70.175	ENSCHIG00000018820	-	98	70.149	Capra_hircus
ENSXETG00000002042	rnf113a	99	65.060	ENSCHIG00000015616	-	98	65.060	Capra_hircus
ENSXETG00000002042	rnf113a	97	70.588	ENSTSYG00000001308	RNF113A	94	70.588	Carlito_syrichta
ENSXETG00000002042	rnf113a	99	70.642	ENSCPOG00000038517	-	97	70.336	Cavia_porcellus
ENSXETG00000002042	rnf113a	95	62.338	ENSCCAG00000021327	RNF113B	94	61.812	Cebus_capucinus
ENSXETG00000002042	rnf113a	97	71.118	ENSCCAG00000013617	RNF113A	93	71.384	Cebus_capucinus
ENSXETG00000002042	rnf113a	98	70.482	ENSCATG00000002702	RNF113A	92	72.240	Cercocebus_atys
ENSXETG00000002042	rnf113a	99	70.122	ENSCLAG00000017479	-	95	68.902	Chinchilla_lanigera
ENSXETG00000002042	rnf113a	99	59.561	ENSCSAG00000000222	RNF113B	95	59.077	Chlorocebus_sabaeus
ENSXETG00000002042	rnf113a	97	61.736	ENSCSAG00000019472	-	92	62.222	Chlorocebus_sabaeus
ENSXETG00000002042	rnf113a	79	68.165	ENSCHOG00000008711	-	100	68.539	Choloepus_hoffmanni
ENSXETG00000002042	rnf113a	97	77.532	ENSCPBG00000026980	-	97	75.710	Chrysemys_picta_bellii
ENSXETG00000002042	rnf113a	91	66.667	ENSCING00000009197	-	92	66.667	Ciona_intestinalis
ENSXETG00000002042	rnf113a	92	67.687	ENSCSAVG00000006210	-	90	68.027	Ciona_savignyi
ENSXETG00000002042	rnf113a	97	71.429	ENSCANG00000037715	RNF113A	94	70.497	Colobus_angolensis_palliatus
ENSXETG00000002042	rnf113a	95	59.934	ENSCANG00000041552	RNF113B	95	60.000	Colobus_angolensis_palliatus
ENSXETG00000002042	rnf113a	99	70.448	ENSCGRG00001002251	Rnf113a1	94	71.340	Cricetulus_griseus_chok1gshd
ENSXETG00000002042	rnf113a	99	70.149	ENSCGRG00000019441	Rnf113a1	94	71.028	Cricetulus_griseus_crigri
ENSXETG00000002042	rnf113a	97	69.470	ENSCGRG00000016675	Rnf113a2	95	69.470	Cricetulus_griseus_crigri
ENSXETG00000002042	rnf113a	99	78.370	ENSCSEG00000021570	rnf113a	84	78.370	Cynoglossus_semilaevis
ENSXETG00000002042	rnf113a	99	77.500	ENSCVAG00000011305	rnf113a	98	76.875	Cyprinodon_variegatus
ENSXETG00000002042	rnf113a	97	75.478	ENSDARG00000037930	rnf113a	97	74.522	Danio_rerio
ENSXETG00000002042	rnf113a	99	67.857	ENSDORG00000027624	Rnf113a2	99	67.560	Dipodomys_ordii
ENSXETG00000002042	rnf113a	95	55.799	FBgn0038772	mdlc	94	54.734	Drosophila_melanogaster
ENSXETG00000002042	rnf113a	100	67.257	ENSETEG00000018346	-	99	67.847	Echinops_telfairi
ENSXETG00000002042	rnf113a	99	70.000	ENSEBUG00000016079	rnf113a	97	69.375	Eptatretus_burgeri
ENSXETG00000002042	rnf113a	99	66.866	ENSEASG00005010538	-	98	66.567	Equus_asinus_asinus
ENSXETG00000002042	rnf113a	98	71.084	ENSECAG00000003934	-	98	69.643	Equus_caballus
ENSXETG00000002042	rnf113a	96	66.875	ENSECAG00000004638	-	100	67.812	Equus_caballus
ENSXETG00000002042	rnf113a	96	75.080	ENSELUG00000020657	rnf113a	97	75.080	Esox_lucius
ENSXETG00000002042	rnf113a	99	69.552	ENSFCAG00000025700	-	98	69.254	Felis_catus
ENSXETG00000002042	rnf113a	97	71.118	ENSFCAG00000024392	-	91	70.807	Felis_catus
ENSXETG00000002042	rnf113a	100	65.976	ENSFCAG00000028962	-	98	67.160	Felis_catus
ENSXETG00000002042	rnf113a	87	79.928	ENSFALG00000004633	-	92	79.433	Ficedula_albicollis
ENSXETG00000002042	rnf113a	99	76.176	ENSFHEG00000023305	rnf113a	98	76.176	Fundulus_heteroclitus
ENSXETG00000002042	rnf113a	94	78.095	ENSGMOG00000004541	rnf113a	94	78.095	Gadus_morhua
ENSXETG00000002042	rnf113a	96	76.677	ENSGALG00000000538	RNF113A	95	76.730	Gallus_gallus
ENSXETG00000002042	rnf113a	99	78.056	ENSGAFG00000011863	rnf113a	98	77.429	Gambusia_affinis
ENSXETG00000002042	rnf113a	98	77.090	ENSGACG00000009738	rnf113a	97	77.090	Gasterosteus_aculeatus
ENSXETG00000002042	rnf113a	97	77.532	ENSGAGG00000020490	-	97	76.341	Gopherus_agassizii
ENSXETG00000002042	rnf113a	97	59.494	ENSGGOG00000023052	RNF113B	96	59.062	Gorilla_gorilla
ENSXETG00000002042	rnf113a	99	70.448	ENSGGOG00000002324	RNF113A	96	70.427	Gorilla_gorilla
ENSXETG00000002042	rnf113a	96	76.433	ENSHBUG00000008626	rnf113a	97	77.143	Haplochromis_burtoni
ENSXETG00000002042	rnf113a	97	70.093	ENSHGLG00000019571	-	94	70.405	Heterocephalus_glaber_female
ENSXETG00000002042	rnf113a	97	69.018	ENSHGLG00100019582	-	94	69.325	Heterocephalus_glaber_male
ENSXETG00000002042	rnf113a	97	77.636	ENSHCOG00000003421	rnf113a	96	76.677	Hippocampus_comes
ENSXETG00000002042	rnf113a	97	77.707	ENSIPUG00000013431	RNF113A	97	78.344	Ictalurus_punctatus
ENSXETG00000002042	rnf113a	99	69.345	ENSSTOG00000019866	-	98	68.750	Ictidomys_tridecemlineatus
ENSXETG00000002042	rnf113a	79	54.545	ENSJJAG00000019849	Rnf113a1	94	53.788	Jaculus_jaculus
ENSXETG00000002042	rnf113a	99	76.852	ENSKMAG00000009830	rnf113a	99	76.235	Kryptolebias_marmoratus
ENSXETG00000002042	rnf113a	99	75.000	ENSLBEG00000004627	rnf113a	99	75.617	Labrus_bergylta
ENSXETG00000002042	rnf113a	99	74.847	ENSLACG00000013178	rnf113a	95	76.206	Latimeria_chalumnae
ENSXETG00000002042	rnf113a	97	75.949	ENSLOCG00000011785	rnf113a	97	75.235	Lepisosteus_oculatus
ENSXETG00000002042	rnf113a	99	67.761	ENSLAFG00000013906	-	98	67.463	Loxodonta_africana
ENSXETG00000002042	rnf113a	98	70.482	ENSMFAG00000018472	RNF113A	92	72.240	Macaca_fascicularis
ENSXETG00000002042	rnf113a	98	70.482	ENSMMUG00000020223	RNF113A	92	72.240	Macaca_mulatta
ENSXETG00000002042	rnf113a	98	70.482	ENSMNEG00000019778	RNF113A	92	72.240	Macaca_nemestrina
ENSXETG00000002042	rnf113a	98	70.482	ENSMLEG00000020750	RNF113A	92	72.240	Mandrillus_leucophaeus
ENSXETG00000002042	rnf113a	80	66.667	ENSMLEG00000038757	RNF113B	87	66.667	Mandrillus_leucophaeus
ENSXETG00000002042	rnf113a	99	77.160	ENSMAMG00000021895	rnf113a	99	77.469	Mastacembelus_armatus
ENSXETG00000002042	rnf113a	96	76.752	ENSMZEG00005023086	rnf113a	97	77.460	Maylandia_zebra
ENSXETG00000002042	rnf113a	87	81.588	ENSMGAG00000001753	-	95	81.720	Meleagris_gallopavo
ENSXETG00000002042	rnf113a	99	68.249	ENSMICG00000001750	-	98	68.249	Microcebus_murinus
ENSXETG00000002042	rnf113a	98	67.683	ENSMICG00000038084	-	96	67.073	Microcebus_murinus
ENSXETG00000002042	rnf113a	99	69.725	ENSMOCG00000005370	-	91	70.938	Microtus_ochrogaster
ENSXETG00000002042	rnf113a	96	78.095	ENSMMOG00000016954	rnf113a	97	78.095	Mola_mola
ENSXETG00000002042	rnf113a	99	69.846	ENSMALG00000007938	rnf113a	99	69.846	Monopterus_albus
ENSXETG00000002042	rnf113a	97	70.533	MGP_CAROLIEiJ_G0017943	Rnf113a2	96	69.350	Mus_caroli
ENSXETG00000002042	rnf113a	99	71.472	ENSMUSG00000036537	Rnf113a1	95	71.166	Mus_musculus
ENSXETG00000002042	rnf113a	97	70.533	ENSMUSG00000098134	Rnf113a2	94	71.293	Mus_musculus
ENSXETG00000002042	rnf113a	98	70.405	MGP_PahariEiJ_G0031547	Rnf113a1	94	70.717	Mus_pahari
ENSXETG00000002042	rnf113a	97	70.717	MGP_PahariEiJ_G0029702	Rnf113a2	95	70.093	Mus_pahari
ENSXETG00000002042	rnf113a	97	71.787	MGP_SPRETEiJ_G0034156	Rnf113a1	93	71.787	Mus_spretus
ENSXETG00000002042	rnf113a	97	70.533	MGP_SPRETEiJ_G0018788	Rnf113a2	94	71.293	Mus_spretus
ENSXETG00000002042	rnf113a	99	69.617	ENSMPUG00000019358	-	94	71.472	Mustela_putorius_furo
ENSXETG00000002042	rnf113a	99	67.941	ENSMLUG00000016812	-	98	67.941	Myotis_lucifugus
ENSXETG00000002042	rnf113a	99	67.463	ENSMLUG00000010856	-	97	67.463	Myotis_lucifugus
ENSXETG00000002042	rnf113a	99	75.309	ENSNBRG00000004314	rnf113a	99	76.000	Neolamprologus_brichardi
ENSXETG00000002042	rnf113a	97	59.621	ENSNLEG00000007844	RNF113B	96	58.805	Nomascus_leucogenys
ENSXETG00000002042	rnf113a	97	71.429	ENSNLEG00000018333	RNF113A	98	69.254	Nomascus_leucogenys
ENSXETG00000002042	rnf113a	95	72.642	ENSMEUG00000001855	-	95	72.956	Notamacropus_eugenii
ENSXETG00000002042	rnf113a	96	76.115	ENSONIG00000000741	rnf113a	97	76.825	Oreochromis_niloticus
ENSXETG00000002042	rnf113a	99	68.847	ENSOANG00000002592	-	95	70.093	Ornithorhynchus_anatinus
ENSXETG00000002042	rnf113a	99	67.761	ENSOCUG00000016207	-	97	67.463	Oryctolagus_cuniculus
ENSXETG00000002042	rnf113a	99	78.086	ENSORLG00000002442	rnf113a	100	78.086	Oryzias_latipes
ENSXETG00000002042	rnf113a	99	77.778	ENSORLG00020011512	rnf113a	100	77.778	Oryzias_latipes_hni
ENSXETG00000002042	rnf113a	99	78.086	ENSORLG00015004382	rnf113a	100	78.086	Oryzias_latipes_hsok
ENSXETG00000002042	rnf113a	96	79.936	ENSOMEG00000020197	rnf113a	97	79.936	Oryzias_melastigma
ENSXETG00000002042	rnf113a	97	68.438	ENSOGAG00000011638	RNF113B	94	67.188	Otolemur_garnettii
ENSXETG00000002042	rnf113a	99	69.345	ENSOGAG00000031602	RNF113A	98	68.750	Otolemur_garnettii
ENSXETG00000002042	rnf113a	99	63.717	ENSOARG00000015294	-	98	62.537	Ovis_aries
ENSXETG00000002042	rnf113a	99	70.175	ENSOARG00000009771	-	98	70.149	Ovis_aries
ENSXETG00000002042	rnf113a	97	59.810	ENSPPAG00000040641	RNF113B	96	59.375	Pan_paniscus
ENSXETG00000002042	rnf113a	99	70.448	ENSPPAG00000009537	RNF113A	98	69.254	Pan_paniscus
ENSXETG00000002042	rnf113a	99	69.552	ENSPPRG00000011512	-	98	69.254	Panthera_pardus
ENSXETG00000002042	rnf113a	100	65.579	ENSPPRG00000020640	-	96	67.879	Panthera_pardus
ENSXETG00000002042	rnf113a	99	69.552	ENSPTIG00000007986	-	98	69.254	Panthera_tigris_altaica
ENSXETG00000002042	rnf113a	97	59.810	ENSPTRG00000005987	RNF113B	96	59.375	Pan_troglodytes
ENSXETG00000002042	rnf113a	99	70.448	ENSPTRG00000022231	RNF113A	98	69.254	Pan_troglodytes
ENSXETG00000002042	rnf113a	98	70.482	ENSPANG00000011522	RNF113A	92	72.240	Papio_anubis
ENSXETG00000002042	rnf113a	97	74.522	ENSPKIG00000016796	rnf113a	99	74.613	Paramormyrops_kingsleyae
ENSXETG00000002042	rnf113a	89	80.769	ENSPSIG00000012676	-	96	81.362	Pelodiscus_sinensis
ENSXETG00000002042	rnf113a	99	76.308	ENSPMGG00000009668	rnf113a	99	76.308	Periophthalmus_magnuspinnatus
ENSXETG00000002042	rnf113a	99	69.725	ENSPEMG00000002490	Rnf113a1	95	69.419	Peromyscus_maniculatus_bairdii
ENSXETG00000002042	rnf113a	90	74.306	ENSPMAG00000005184	rnf113a	95	74.648	Petromyzon_marinus
ENSXETG00000002042	rnf113a	98	69.880	ENSPCIG00000028916	-	91	72.897	Phascolarctos_cinereus
ENSXETG00000002042	rnf113a	99	76.803	ENSPFOG00000014248	rnf113a	98	76.176	Poecilia_formosa
ENSXETG00000002042	rnf113a	99	76.489	ENSPLAG00000010435	rnf113a	98	75.862	Poecilia_latipinna
ENSXETG00000002042	rnf113a	99	77.743	ENSPMEG00000010641	rnf113a	98	77.116	Poecilia_mexicana
ENSXETG00000002042	rnf113a	99	77.743	ENSPREG00000009900	rnf113a	98	77.116	Poecilia_reticulata
ENSXETG00000002042	rnf113a	95	62.136	ENSPPYG00000005460	RNF113B	95	61.736	Pongo_abelii
ENSXETG00000002042	rnf113a	99	70.149	ENSPPYG00000020676	RNF113A	96	69.909	Pongo_abelii
ENSXETG00000002042	rnf113a	99	67.665	ENSPCAG00000014633	-	97	67.365	Procavia_capensis
ENSXETG00000002042	rnf113a	97	67.081	ENSPCOG00000005671	-	93	67.081	Propithecus_coquereli
ENSXETG00000002042	rnf113a	96	76.752	ENSPNYG00000013863	rnf113a	97	77.460	Pundamilia_nyererei
ENSXETG00000002042	rnf113a	96	77.316	ENSPNAG00000017428	rnf113a	97	77.636	Pygocentrus_nattereri
ENSXETG00000002042	rnf113a	99	70.031	ENSRNOG00000059412	Rnf113a1	94	71.028	Rattus_norvegicus
ENSXETG00000002042	rnf113a	99	70.031	ENSRNOG00000034040	LOC108348079	94	71.028	Rattus_norvegicus
ENSXETG00000002042	rnf113a	97	71.429	ENSRBIG00000017389	RNF113A	94	70.497	Rhinopithecus_bieti
ENSXETG00000002042	rnf113a	95	59.603	ENSRBIG00000036094	RNF113B	94	60.000	Rhinopithecus_bieti
ENSXETG00000002042	rnf113a	97	71.429	ENSRROG00000012149	RNF113A	94	70.497	Rhinopithecus_roxellana
ENSXETG00000002042	rnf113a	95	59.272	ENSRROG00000045661	RNF113B	94	59.677	Rhinopithecus_roxellana
ENSXETG00000002042	rnf113a	99	68.657	ENSSBOG00000017704	RNF113A	98	67.761	Saimiri_boliviensis_boliviensis
ENSXETG00000002042	rnf113a	92	61.935	ENSSBOG00000029719	RNF113B	94	61.812	Saimiri_boliviensis_boliviensis
ENSXETG00000002042	rnf113a	95	71.562	ENSSHAG00000008839	-	91	71.875	Sarcophilus_harrisii
ENSXETG00000002042	rnf113a	94	76.645	ENSSFOG00015016567	rnf113a	93	75.896	Scleropages_formosus
ENSXETG00000002042	rnf113a	98	77.215	ENSSMAG00000009235	rnf113a	97	77.848	Scophthalmus_maximus
ENSXETG00000002042	rnf113a	96	78.344	ENSSDUG00000022244	rnf113a	97	78.344	Seriola_dumerili
ENSXETG00000002042	rnf113a	96	78.344	ENSSLDG00000018582	rnf113a	97	78.344	Seriola_lalandi_dorsalis
ENSXETG00000002042	rnf113a	98	69.789	ENSSARG00000010436	-	95	69.632	Sorex_araneus
ENSXETG00000002042	rnf113a	95	75.962	ENSSPUG00000018786	-	86	75.000	Sphenodon_punctatus
ENSXETG00000002042	rnf113a	99	76.235	ENSSPAG00000013187	rnf113a	99	76.235	Stegastes_partitus
ENSXETG00000002042	rnf113a	100	66.569	ENSSSCG00000032973	-	99	66.862	Sus_scrofa
ENSXETG00000002042	rnf113a	99	76.074	ENSTGUG00000001947	-	99	74.233	Taeniopygia_guttata
ENSXETG00000002042	rnf113a	99	75.077	ENSTRUG00000011142	rnf113a	98	75.385	Takifugu_rubripes
ENSXETG00000002042	rnf113a	99	75.460	ENSTNIG00000014938	rnf113a	98	75.767	Tetraodon_nigroviridis
ENSXETG00000002042	rnf113a	98	69.512	ENSTBEG00000012687	-	96	69.512	Tupaia_belangeri
ENSXETG00000002042	rnf113a	97	68.807	ENSUAMG00000024564	-	96	70.642	Ursus_americanus
ENSXETG00000002042	rnf113a	98	69.394	ENSUMAG00000002167	-	95	72.381	Ursus_maritimus
ENSXETG00000002042	rnf113a	92	69.000	ENSVPAG00000004521	-	94	69.966	Vicugna_pacos
ENSXETG00000002042	rnf113a	58	65.608	ENSVVUG00000004522	-	82	57.317	Vulpes_vulpes
ENSXETG00000002042	rnf113a	99	68.824	ENSVVUG00000011662	-	98	68.824	Vulpes_vulpes
ENSXETG00000002042	rnf113a	95	77.778	ENSXCOG00000017542	rnf113a	97	77.124	Xiphophorus_couchianus
ENSXETG00000002042	rnf113a	99	77.116	ENSXMAG00000008169	rnf113a	98	76.489	Xiphophorus_maculatus