EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002072 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: -
Full Name: Xenopus tropicalis calcium homeostasis endoplasmic reticulum protein (cherp)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 17675 bases
Position: chrGL173576.1:23363-41037
Accession: NM_001011099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004448	Surp	PF01805.20	4.9e-16	1	1
ENSXETP00000004447	Surp	PF01805.20	5.1e-16	1	1
ENSXETP00000004448	G-patch	PF01585.23	8.8e-11	1	1
ENSXETP00000004447	G-patch	PF01585.23	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004448	-	3733	-	ENSXETP00000004448	932 (aa)	-	F6Q2F5
ENSXETT00000004447	-	3781	XM_012960708	ENSXETP00000004447	948 (aa)	XP_012816162	F6Q2I1

Gene Model

Click here to download ENSXETG00000002072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002072	cherp	97	79.543	ENSG00000085872	CHERP	56	83.041	Homo_sapiens
ENSXETG00000002072	cherp	57	60.759	ENSAPOG00000009646	cherp	90	68.798	Acanthochromis_polyacanthus
ENSXETG00000002072	cherp	97	75.110	ENSAMEG00000010048	CHERP	56	76.218	Ailuropoda_melanoleuca
ENSXETG00000002072	cherp	97	66.056	ENSAOCG00000017846	cherp	99	65.773	Amphiprion_ocellaris
ENSXETG00000002072	cherp	97	65.264	ENSAPEG00000021128	cherp	99	65.914	Amphiprion_percula
ENSXETG00000002072	cherp	97	67.132	ENSATEG00000006341	cherp	98	66.235	Anabas_testudineus
ENSXETG00000002072	cherp	75	78.236	ENSAPLG00000010773	CHERP	98	76.497	Anas_platyrhynchos
ENSXETG00000002072	cherp	97	69.828	ENSANAG00000024284	CHERP	55	83.236	Aotus_nancymaae
ENSXETG00000002072	cherp	97	78.890	ENSBTAG00000005289	CHERP	56	82.651	Bos_taurus
ENSXETG00000002072	cherp	78	78.505	ENSCJAG00000040462	CHERP	55	83.236	Callithrix_jacchus
ENSXETG00000002072	cherp	78	79.456	ENSCAFG00000015671	CHERP	56	83.236	Canis_familiaris
ENSXETG00000002072	cherp	84	91.139	ENSCAFG00020009941	CHERP	91	90.244	Canis_lupus_dingo
ENSXETG00000002072	cherp	86	86.022	ENSCHIG00000013765	CHERP	95	86.022	Capra_hircus
ENSXETG00000002072	cherp	97	78.548	ENSCPOG00000019949	CHERP	55	82.261	Cavia_porcellus
ENSXETG00000002072	cherp	78	77.971	ENSCCAG00000031534	CHERP	55	83.236	Cebus_capucinus
ENSXETG00000002072	cherp	78	78.238	ENSCATG00000031409	CHERP	55	83.236	Cercocebus_atys
ENSXETG00000002072	cherp	86	78.129	ENSCLAG00000005484	CHERP	58	82.617	Chinchilla_lanigera
ENSXETG00000002072	cherp	97	78.671	ENSCSAG00000005740	CHERP	56	83.236	Chlorocebus_sabaeus
ENSXETG00000002072	cherp	97	77.912	ENSCPBG00000014970	CHERP	99	78.022	Chrysemys_picta_bellii
ENSXETG00000002072	cherp	71	45.994	ENSCING00000004814	-	59	57.143	Ciona_intestinalis
ENSXETG00000002072	cherp	51	76.667	ENSCSAVG00000002455	-	55	55.634	Ciona_savignyi
ENSXETG00000002072	cherp	97	79.847	ENSCANG00000032053	CHERP	56	83.236	Colobus_angolensis_palliatus
ENSXETG00000002072	cherp	97	77.239	ENSCGRG00001023316	Cherp	54	83.821	Cricetulus_griseus_chok1gshd
ENSXETG00000002072	cherp	97	78.158	ENSCGRG00000015901	Cherp	56	83.821	Cricetulus_griseus_crigri
ENSXETG00000002072	cherp	75	66.387	ENSCVAG00000003622	cherp	93	65.966	Cyprinodon_variegatus
ENSXETG00000002072	cherp	97	63.656	ENSDARG00000021812	cherp	100	72.932	Danio_rerio
ENSXETG00000002072	cherp	97	75.741	ENSDORG00000027623	Cherp	79	75.466	Dipodomys_ordii
ENSXETG00000002072	cherp	82	79.911	ENSETEG00000019543	CHERP	80	79.556	Echinops_telfairi
ENSXETG00000002072	cherp	78	78.912	ENSEASG00005000428	CHERP	51	83.398	Equus_asinus_asinus
ENSXETG00000002072	cherp	78	79.348	ENSECAG00000012713	CHERP	56	83.398	Equus_caballus
ENSXETG00000002072	cherp	98	64.681	ENSELUG00000023026	cherp	98	61.890	Esox_lucius
ENSXETG00000002072	cherp	78	77.644	ENSFCAG00000013172	CHERP	55	83.236	Felis_catus
ENSXETG00000002072	cherp	78	77.763	ENSFALG00000013410	CHERP	86	77.547	Ficedula_albicollis
ENSXETG00000002072	cherp	78	77.778	ENSGALG00000003824	CHERP	88	77.582	Gallus_gallus
ENSXETG00000002072	cherp	97	62.633	ENSGACG00000002053	cherp	98	61.818	Gasterosteus_aculeatus
ENSXETG00000002072	cherp	97	77.253	ENSGAGG00000014208	CHERP	99	77.582	Gopherus_agassizii
ENSXETG00000002072	cherp	61	87.912	ENSGGOG00000016348	CHERP	55	66.732	Gorilla_gorilla
ENSXETG00000002072	cherp	97	79.409	ENSHGLG00000002993	CHERP	55	82.651	Heterocephalus_glaber_female
ENSXETG00000002072	cherp	58	74.436	ENSHGLG00100010390	CHERP	55	77.273	Heterocephalus_glaber_male
ENSXETG00000002072	cherp	78	64.447	ENSHCOG00000007691	cherp	99	62.292	Hippocampus_comes
ENSXETG00000002072	cherp	97	67.756	ENSIPUG00000025008	cherp	99	66.920	Ictalurus_punctatus
ENSXETG00000002072	cherp	77	80.110	ENSSTOG00000012089	CHERP	56	82.846	Ictidomys_tridecemlineatus
ENSXETG00000002072	cherp	78	66.667	ENSKMAG00000009101	cherp	78	65.909	Kryptolebias_marmoratus
ENSXETG00000002072	cherp	77	66.440	ENSLBEG00000007586	cherp	84	73.457	Labrus_bergylta
ENSXETG00000002072	cherp	78	75.429	ENSLACG00000018221	CHERP	62	77.095	Latimeria_chalumnae
ENSXETG00000002072	cherp	97	71.459	ENSLOCG00000003654	cherp	99	70.677	Lepisosteus_oculatus
ENSXETG00000002072	cherp	78	78.464	ENSLAFG00000009096	CHERP	100	76.915	Loxodonta_africana
ENSXETG00000002072	cherp	78	78.342	ENSMFAG00000033267	CHERP	55	83.236	Macaca_fascicularis
ENSXETG00000002072	cherp	78	78.342	ENSMNEG00000004125	CHERP	55	83.236	Macaca_nemestrina
ENSXETG00000002072	cherp	82	87.988	ENSMLEG00000044337	CHERP	86	87.988	Mandrillus_leucophaeus
ENSXETG00000002072	cherp	71	77.644	ENSMGAG00000005571	CHERP	99	76.640	Meleagris_gallopavo
ENSXETG00000002072	cherp	97	79.117	ENSMAUG00000015856	Cherp	55	83.626	Mesocricetus_auratus
ENSXETG00000002072	cherp	97	77.005	ENSMICG00000004577	CHERP	56	82.456	Microcebus_murinus
ENSXETG00000002072	cherp	97	79.630	ENSMOCG00000014697	Cherp	55	83.821	Microtus_ochrogaster
ENSXETG00000002072	cherp	57	83.117	ENSMODG00000014938	CHERP	54	85.686	Monodelphis_domestica
ENSXETG00000002072	cherp	97	66.096	ENSMALG00000020688	cherp	99	65.705	Monopterus_albus
ENSXETG00000002072	cherp	58	81.718	MGP_CAROLIEiJ_G0031220	Cherp	55	83.821	Mus_caroli
ENSXETG00000002072	cherp	97	79.847	MGP_PahariEiJ_G0021685	Cherp	55	83.821	Mus_pahari
ENSXETG00000002072	cherp	98	77.297	MGP_SPRETEiJ_G0032341	Cherp	55	83.626	Mus_spretus
ENSXETG00000002072	cherp	78	73.613	ENSMLUG00000013881	CHERP	56	82.101	Myotis_lucifugus
ENSXETG00000002072	cherp	57	84.015	ENSNGAG00000023323	Cherp	55	85.519	Nannospalax_galili
ENSXETG00000002072	cherp	97	78.671	ENSNLEG00000005536	CHERP	56	83.431	Nomascus_leucogenys
ENSXETG00000002072	cherp	85	84.983	ENSMEUG00000010840	CHERP	87	85.686	Notamacropus_eugenii
ENSXETG00000002072	cherp	78	66.129	ENSORLG00020013142	cherp	86	73.077	Oryzias_latipes_hni
ENSXETG00000002072	cherp	97	62.540	ENSOMEG00000016947	cherp	75	73.574	Oryzias_melastigma
ENSXETG00000002072	cherp	98	76.997	ENSOGAG00000005834	CHERP	56	84.333	Otolemur_garnettii
ENSXETG00000002072	cherp	97	72.204	ENSOARG00000018876	CHERP	55	80.620	Ovis_aries
ENSXETG00000002072	cherp	78	77.867	ENSPPAG00000029195	CHERP	55	83.041	Pan_paniscus
ENSXETG00000002072	cherp	78	77.644	ENSPPRG00000003275	CHERP	55	83.236	Panthera_pardus
ENSXETG00000002072	cherp	97	79.457	ENSPTRG00000010647	CHERP	56	83.041	Pan_troglodytes
ENSXETG00000002072	cherp	78	78.342	ENSPANG00000011698	CHERP	55	83.236	Papio_anubis
ENSXETG00000002072	cherp	97	79.121	ENSPSIG00000011974	CHERP	99	77.437	Pelodiscus_sinensis
ENSXETG00000002072	cherp	57	82.037	ENSPEMG00000011238	Cherp	54	83.626	Peromyscus_maniculatus_bairdii
ENSXETG00000002072	cherp	97	76.336	ENSPPYG00000009691	CHERP	54	78.474	Pongo_abelii
ENSXETG00000002072	cherp	67	80.488	ENSPCOG00000022788	CHERP	95	93.939	Propithecus_coquereli
ENSXETG00000002072	cherp	57	82.407	ENSRNOG00000012323	Cherp	55	83.821	Rattus_norvegicus
ENSXETG00000002072	cherp	97	71.953	ENSRBIG00000038621	CHERP	55	83.398	Rhinopithecus_bieti
ENSXETG00000002072	cherp	97	71.953	ENSRROG00000040770	CHERP	55	83.236	Rhinopithecus_roxellana
ENSXETG00000002072	cherp	78	77.867	ENSSBOG00000014492	CHERP	55	83.236	Saimiri_boliviensis_boliviensis
ENSXETG00000002072	cherp	58	82.994	ENSSHAG00000010752	CHERP	57	85.547	Sarcophilus_harrisii
ENSXETG00000002072	cherp	66	83.333	ENSSFOG00015008022	cherp	84	75.602	Scleropages_formosus
ENSXETG00000002072	cherp	97	63.799	ENSSMAG00000005362	cherp	99	64.301	Scophthalmus_maximus
ENSXETG00000002072	cherp	97	66.454	ENSSDUG00000019712	cherp	99	64.657	Seriola_dumerili
ENSXETG00000002072	cherp	78	77.824	ENSSPUG00000008901	CHERP	99	75.851	Sphenodon_punctatus
ENSXETG00000002072	cherp	97	78.349	ENSSSCG00000013860	CHERP	56	83.431	Sus_scrofa
ENSXETG00000002072	cherp	78	78.825	ENSTGUG00000000680	CHERP	99	79.341	Taeniopygia_guttata
ENSXETG00000002072	cherp	67	76.471	ENSTTRG00000015006	CHERP	68	82.812	Tursiops_truncatus
ENSXETG00000002072	cherp	97	73.932	ENSUAMG00000017295	CHERP	80	76.397	Ursus_americanus
ENSXETG00000002072	cherp	67	75.325	ENSUMAG00000000965	CHERP	65	76.052	Ursus_maritimus
ENSXETG00000002072	cherp	78	77.674	ENSVVUG00000016546	CHERP	55	83.236	Vulpes_vulpes