EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002211 (Gene tree)
Gene ID: -
Gene Symbol: srsf5
Alias: -
Full Name: Xenopus tropicalis serine/arginine-rich splicing factor 5 (srsf5)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 3893 bases
Position: chrGL172882.1:1463821-1467713
Accession: NM_001004783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000057107	RRM_1	PF00076.22	1.4e-31	1	2
ENSXETP00000057107	RRM_1	PF00076.22	1.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000057107	-	1238	XM_012968191	ENSXETP00000057107	272 (aa)	XP_012823645	Q6DK94

Gene Model

Click here to download ENSXETG00000002211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002211	srsf5	70	39.604	ENSXETG00000008954	srsf1	69	41.791
ENSXETG00000002211	srsf5	99	57.840	ENSXETG00000017937	srsf5a	73	70.000
ENSXETG00000002211	srsf5	81	38.158	ENSXETG00000026940	srsf9	69	40.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002211	srsf5	67	92.308	ENSG00000100650	SRSF5	99	87.129	Homo_sapiens
ENSXETG00000002211	srsf5	92	74.427	ENSAPOG00000008642	srsf5b	64	84.043	Acanthochromis_polyacanthus
ENSXETG00000002211	srsf5	67	92.308	ENSAMEG00000014574	SRSF5	93	83.846	Ailuropoda_melanoleuca
ENSXETG00000002211	srsf5	93	72.491	ENSACIG00000010742	srsf5b	81	79.070	Amphilophus_citrinellus
ENSXETG00000002211	srsf5	92	74.427	ENSAOCG00000005719	srsf5b	64	84.043	Amphiprion_ocellaris
ENSXETG00000002211	srsf5	92	74.427	ENSAPEG00000007830	srsf5b	64	84.043	Amphiprion_percula
ENSXETG00000002211	srsf5	92	73.664	ENSATEG00000019112	srsf5b	64	83.511	Anabas_testudineus
ENSXETG00000002211	srsf5	98	84.701	ENSAPLG00000014681	SRSF5	94	80.077	Anas_platyrhynchos
ENSXETG00000002211	srsf5	67	91.758	ENSACAG00000005143	SRSF5	94	83.077	Anolis_carolinensis
ENSXETG00000002211	srsf5	67	92.308	ENSANAG00000027977	-	99	87.129	Aotus_nancymaae
ENSXETG00000002211	srsf5	93	73.234	ENSACLG00000026424	srsf5b	64	82.979	Astatotilapia_calliptera
ENSXETG00000002211	srsf5	92	67.843	ENSAMXG00000011932	srsf5b	84	80.645	Astyanax_mexicanus
ENSXETG00000002211	srsf5	67	92.308	ENSBTAG00000011596	SRSF5	93	83.846	Bos_taurus
ENSXETG00000002211	srsf5	67	92.308	ENSCJAG00000014884	SRSF5	99	87.129	Callithrix_jacchus
ENSXETG00000002211	srsf5	67	92.308	ENSCAFG00000016589	SRSF5	93	83.846	Canis_familiaris
ENSXETG00000002211	srsf5	67	92.308	ENSCAFG00020005661	SRSF5	93	83.846	Canis_lupus_dingo
ENSXETG00000002211	srsf5	67	92.308	ENSCHIG00000016794	SRSF5	92	83.846	Capra_hircus
ENSXETG00000002211	srsf5	90	88.980	ENSTSYG00000007786	SRSF5	99	87.129	Carlito_syrichta
ENSXETG00000002211	srsf5	67	92.308	ENSCAPG00000008801	SRSF5	92	83.462	Cavia_aperea
ENSXETG00000002211	srsf5	67	92.308	ENSCPOG00000039926	SRSF5	92	83.077	Cavia_porcellus
ENSXETG00000002211	srsf5	67	92.308	ENSCCAG00000029002	SRSF5	99	87.129	Cebus_capucinus
ENSXETG00000002211	srsf5	67	92.308	ENSCATG00000045051	SRSF5	99	87.129	Cercocebus_atys
ENSXETG00000002211	srsf5	67	92.308	ENSCLAG00000004755	SRSF5	93	82.308	Chinchilla_lanigera
ENSXETG00000002211	srsf5	67	92.308	ENSCSAG00000013041	SRSF5	94	85.385	Chlorocebus_sabaeus
ENSXETG00000002211	srsf5	67	92.857	ENSCPBG00000021653	SRSF5	94	82.308	Chrysemys_picta_bellii
ENSXETG00000002211	srsf5	67	92.308	ENSCANG00000030560	SRSF5	99	87.129	Colobus_angolensis_palliatus
ENSXETG00000002211	srsf5	67	92.308	ENSCGRG00001015339	Srsf5	94	83.846	Cricetulus_griseus_chok1gshd
ENSXETG00000002211	srsf5	67	92.308	ENSCGRG00000009833	Srsf5	94	83.846	Cricetulus_griseus_crigri
ENSXETG00000002211	srsf5	90	75.697	ENSCSEG00000003801	srsf5b	65	82.540	Cynoglossus_semilaevis
ENSXETG00000002211	srsf5	68	83.598	ENSCVAG00000017240	srsf5b	58	82.979	Cyprinodon_variegatus
ENSXETG00000002211	srsf5	67	83.425	ENSDARG00000027734	srsf5b	90	79.839	Danio_rerio
ENSXETG00000002211	srsf5	67	92.308	ENSDNOG00000006160	SRSF5	93	83.721	Dasypus_novemcinctus
ENSXETG00000002211	srsf5	67	92.308	ENSDORG00000003989	Srsf5	94	83.846	Dipodomys_ordii
ENSXETG00000002211	srsf5	67	83.978	ENSETEG00000020396	SRSF5	93	78.682	Echinops_telfairi
ENSXETG00000002211	srsf5	68	65.957	ENSEBUG00000006229	srsf5b	69	66.120	Eptatretus_burgeri
ENSXETG00000002211	srsf5	67	92.308	ENSEASG00005016615	SRSF5	93	83.846	Equus_asinus_asinus
ENSXETG00000002211	srsf5	67	92.308	ENSECAG00000026873	SRSF5	93	83.846	Equus_caballus
ENSXETG00000002211	srsf5	68	75.743	ENSELUG00000019852	srsf5b	85	72.917	Esox_lucius
ENSXETG00000002211	srsf5	67	92.308	ENSFCAG00000008848	SRSF5	98	87.129	Felis_catus
ENSXETG00000002211	srsf5	67	86.740	ENSFALG00000004979	SRSF5	94	81.538	Ficedula_albicollis
ENSXETG00000002211	srsf5	67	92.308	ENSFDAG00000011562	SRSF5	94	83.462	Fukomys_damarensis
ENSXETG00000002211	srsf5	84	63.869	ENSFHEG00000009476	srsf5b	61	82.979	Fundulus_heteroclitus
ENSXETG00000002211	srsf5	68	65.812	ENSGMOG00000000595	srsf5b	98	69.778	Gadus_morhua
ENSXETG00000002211	srsf5	67	87.293	ENSGALG00000009421	SRSF5	90	87.402	Gallus_gallus
ENSXETG00000002211	srsf5	94	73.507	ENSGAFG00000002865	srsf5b	62	82.979	Gambusia_affinis
ENSXETG00000002211	srsf5	67	60.236	ENSGACG00000007834	srsf5b	86	72.059	Gasterosteus_aculeatus
ENSXETG00000002211	srsf5	67	92.857	ENSGAGG00000004447	SRSF5	94	82.308	Gopherus_agassizii
ENSXETG00000002211	srsf5	67	92.308	ENSGGOG00000016462	SRSF5	99	87.129	Gorilla_gorilla
ENSXETG00000002211	srsf5	93	72.862	ENSHBUG00000012462	srsf5b	93	79.070	Haplochromis_burtoni
ENSXETG00000002211	srsf5	67	92.857	ENSHGLG00000010147	SRSF5	94	84.231	Heterocephalus_glaber_female
ENSXETG00000002211	srsf5	67	92.857	ENSHGLG00100015328	SRSF5	94	84.231	Heterocephalus_glaber_male
ENSXETG00000002211	srsf5	100	61.172	ENSHGLG00100000095	-	62	64.205	Heterocephalus_glaber_male
ENSXETG00000002211	srsf5	68	74.000	ENSHCOG00000005592	srsf5b	65	79.058	Hippocampus_comes
ENSXETG00000002211	srsf5	67	92.308	ENSSTOG00000020672	SRSF5	94	83.846	Ictidomys_tridecemlineatus
ENSXETG00000002211	srsf5	67	92.308	ENSJJAG00000001688	Srsf5	93	84.615	Jaculus_jaculus
ENSXETG00000002211	srsf5	68	82.447	ENSKMAG00000020486	srsf5b	84	79.688	Kryptolebias_marmoratus
ENSXETG00000002211	srsf5	68	81.579	ENSLBEG00000013647	srsf5b	64	82.011	Labrus_bergylta
ENSXETG00000002211	srsf5	67	90.110	ENSLACG00000005874	SRSF5	93	78.077	Latimeria_chalumnae
ENSXETG00000002211	srsf5	66	83.957	ENSLOCG00000012438	srsf5b	69	82.888	Lepisosteus_oculatus
ENSXETG00000002211	srsf5	67	91.758	ENSLAFG00000005260	SRSF5	93	83.077	Loxodonta_africana
ENSXETG00000002211	srsf5	67	92.308	ENSMFAG00000002393	SRSF5	99	87.129	Macaca_fascicularis
ENSXETG00000002211	srsf5	67	92.308	ENSMNEG00000030872	SRSF5	99	87.129	Macaca_nemestrina
ENSXETG00000002211	srsf5	67	92.308	ENSMLEG00000030017	SRSF5	99	87.129	Mandrillus_leucophaeus
ENSXETG00000002211	srsf5	92	72.556	ENSMAMG00000002673	srsf5b	64	82.723	Mastacembelus_armatus
ENSXETG00000002211	srsf5	93	73.234	ENSMZEG00005003550	srsf5b	64	82.979	Maylandia_zebra
ENSXETG00000002211	srsf5	52	80.986	ENSMGAG00000011835	SRSF5	93	79.638	Meleagris_gallopavo
ENSXETG00000002211	srsf5	67	92.308	ENSMAUG00000009544	Srsf5	94	83.846	Mesocricetus_auratus
ENSXETG00000002211	srsf5	67	92.308	ENSMICG00000037432	-	99	87.129	Microcebus_murinus
ENSXETG00000002211	srsf5	67	92.308	ENSMOCG00000013134	Srsf5	94	83.462	Microtus_ochrogaster
ENSXETG00000002211	srsf5	67	83.871	ENSMMOG00000000137	srsf5b	93	64.122	Mola_mola
ENSXETG00000002211	srsf5	67	92.857	ENSMODG00000011362	SRSF5	94	81.923	Monodelphis_domestica
ENSXETG00000002211	srsf5	68	84.127	ENSMALG00000021875	srsf5b	84	79.070	Monopterus_albus
ENSXETG00000002211	srsf5	67	92.308	ENSMUSG00000021134	Srsf5	96	97.727	Mus_musculus
ENSXETG00000002211	srsf5	67	92.308	MGP_PahariEiJ_G0029659	Srsf5	94	83.846	Mus_pahari
ENSXETG00000002211	srsf5	67	92.308	ENSMPUG00000007458	SRSF5	93	83.846	Mustela_putorius_furo
ENSXETG00000002211	srsf5	67	92.308	ENSMLUG00000011939	SRSF5	92	78.161	Myotis_lucifugus
ENSXETG00000002211	srsf5	67	92.308	ENSNGAG00000010073	-	94	84.231	Nannospalax_galili
ENSXETG00000002211	srsf5	93	72.015	ENSNBRG00000001285	srsf5b	65	82.540	Neolamprologus_brichardi
ENSXETG00000002211	srsf5	67	92.308	ENSNLEG00000001615	SRSF5	99	87.129	Nomascus_leucogenys
ENSXETG00000002211	srsf5	67	92.308	ENSOPRG00000008286	SRSF5	93	87.023	Ochotona_princeps
ENSXETG00000002211	srsf5	67	90.110	ENSODEG00000000700	-	69	88.043	Octodon_degus
ENSXETG00000002211	srsf5	67	92.308	ENSODEG00000013469	-	94	81.923	Octodon_degus
ENSXETG00000002211	srsf5	93	73.234	ENSONIG00000005759	srsf5b	64	82.979	Oreochromis_niloticus
ENSXETG00000002211	srsf5	67	86.813	ENSOANG00000013336	SRSF5	94	79.923	Ornithorhynchus_anatinus
ENSXETG00000002211	srsf5	67	92.308	ENSOCUG00000009274	SRSF5	92	83.462	Oryctolagus_cuniculus
ENSXETG00000002211	srsf5	68	80.526	ENSORLG00000029854	srsf5b	59	82.703	Oryzias_latipes
ENSXETG00000002211	srsf5	92	71.004	ENSORLG00015001720	srsf5b	65	81.053	Oryzias_latipes_hsok
ENSXETG00000002211	srsf5	67	92.308	ENSOGAG00000015122	SRSF5	94	83.846	Otolemur_garnettii
ENSXETG00000002211	srsf5	67	92.308	ENSPPAG00000029921	SRSF5	99	87.129	Pan_paniscus
ENSXETG00000002211	srsf5	67	92.308	ENSPPRG00000012903	SRSF5	98	87.129	Panthera_pardus
ENSXETG00000002211	srsf5	67	92.308	ENSPTIG00000018589	SRSF5	98	87.129	Panthera_tigris_altaica
ENSXETG00000002211	srsf5	67	92.308	ENSPTRG00000006488	SRSF5	99	87.129	Pan_troglodytes
ENSXETG00000002211	srsf5	67	92.308	ENSPANG00000021091	SRSF5	99	87.129	Papio_anubis
ENSXETG00000002211	srsf5	67	92.857	ENSPSIG00000012522	SRSF5	68	90.761	Pelodiscus_sinensis
ENSXETG00000002211	srsf5	67	92.308	ENSPEMG00000020173	Srsf5	94	83.846	Peromyscus_maniculatus_bairdii
ENSXETG00000002211	srsf5	99	53.041	ENSPMAG00000007790	srsf5b	68	62.755	Petromyzon_marinus
ENSXETG00000002211	srsf5	67	92.857	ENSPCIG00000011877	SRSF5	94	81.923	Phascolarctos_cinereus
ENSXETG00000002211	srsf5	94	73.881	ENSPFOG00000017700	srsf5b	62	83.511	Poecilia_formosa
ENSXETG00000002211	srsf5	94	73.134	ENSPLAG00000006480	srsf5b	62	83.511	Poecilia_latipinna
ENSXETG00000002211	srsf5	94	73.881	ENSPMEG00000012751	srsf5b	84	79.070	Poecilia_mexicana
ENSXETG00000002211	srsf5	94	73.507	ENSPREG00000010381	srsf5b	62	83.511	Poecilia_reticulata
ENSXETG00000002211	srsf5	67	92.308	ENSPPYG00000005945	SRSF5	94	85.385	Pongo_abelii
ENSXETG00000002211	srsf5	54	90.604	ENSPCAG00000004405	SRSF5	100	88.591	Procavia_capensis
ENSXETG00000002211	srsf5	67	92.308	ENSPCOG00000014442	SRSF5	94	83.846	Propithecus_coquereli
ENSXETG00000002211	srsf5	93	68.702	ENSPNYG00000002669	srsf5b	94	79.070	Pundamilia_nyererei
ENSXETG00000002211	srsf5	68	83.152	ENSPNAG00000011262	srsf5b	84	79.839	Pygocentrus_nattereri
ENSXETG00000002211	srsf5	67	92.308	ENSRNOG00000005513	Srsf5	94	83.846	Rattus_norvegicus
ENSXETG00000002211	srsf5	67	92.308	ENSRBIG00000013003	SRSF5	99	87.129	Rhinopithecus_bieti
ENSXETG00000002211	srsf5	67	92.308	ENSRROG00000043407	SRSF5	99	87.129	Rhinopithecus_roxellana
ENSXETG00000002211	srsf5	67	92.308	ENSSBOG00000030784	SRSF5	99	87.129	Saimiri_boliviensis_boliviensis
ENSXETG00000002211	srsf5	67	92.857	ENSSHAG00000002871	SRSF5	94	81.923	Sarcophilus_harrisii
ENSXETG00000002211	srsf5	68	75.120	ENSSMAG00000019728	srsf5b	62	78.500	Scophthalmus_maximus
ENSXETG00000002211	srsf5	97	71.377	ENSSDUG00000005766	srsf5b	66	84.043	Seriola_dumerili
ENSXETG00000002211	srsf5	92	73.664	ENSSLDG00000023255	srsf5b	84	79.070	Seriola_lalandi_dorsalis
ENSXETG00000002211	srsf5	67	79.670	ENSSARG00000001059	SRSF5	94	74.615	Sorex_araneus
ENSXETG00000002211	srsf5	100	86.268	ENSSPUG00000002464	SRSF5	95	79.182	Sphenodon_punctatus
ENSXETG00000002211	srsf5	92	74.046	ENSSPAG00000015325	srsf5b	64	83.511	Stegastes_partitus
ENSXETG00000002211	srsf5	67	92.308	ENSSSCG00000032583	SRSF5	93	84.231	Sus_scrofa
ENSXETG00000002211	srsf5	67	86.740	ENSTGUG00000011425	SRSF5	94	81.923	Taeniopygia_guttata
ENSXETG00000002211	srsf5	68	82.011	ENSTRUG00000017811	srsf5b	60	81.915	Takifugu_rubripes
ENSXETG00000002211	srsf5	68	82.011	ENSTNIG00000016411	srsf5b	67	81.915	Tetraodon_nigroviridis
ENSXETG00000002211	srsf5	67	90.110	ENSTBEG00000001972	SRSF5	94	86.641	Tupaia_belangeri
ENSXETG00000002211	srsf5	66	92.265	ENSTTRG00000003318	SRSF5	92	83.784	Tursiops_truncatus
ENSXETG00000002211	srsf5	67	92.308	ENSUAMG00000014184	SRSF5	93	83.846	Ursus_americanus
ENSXETG00000002211	srsf5	70	91.333	ENSUMAG00000009827	SRSF5	93	83.846	Ursus_maritimus
ENSXETG00000002211	srsf5	67	92.308	ENSVPAG00000006448	SRSF5	94	83.846	Vicugna_pacos
ENSXETG00000002211	srsf5	67	92.308	ENSVVUG00000003790	SRSF5	93	83.846	Vulpes_vulpes
ENSXETG00000002211	srsf5	94	67.816	ENSXCOG00000001570	srsf5b	64	83.511	Xiphophorus_couchianus
ENSXETG00000002211	srsf5	94	72.761	ENSXMAG00000026416	srsf5b	84	79.070	Xiphophorus_maculatus