EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002305 (Gene tree)
Gene ID: -
Gene Symbol: rab5a
Alias: -
Full Name: Xenopus tropicalis RAB5A%2C member RAS oncogene family (rab5a)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 23928 bases
Position: chrGL172662.1:3160341-3184268
Accession: NM_001008067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000030581	MMR_HSR1	PF01926.23	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000030581	-	1917	-	ENSXETP00000030581	216 (aa)	-	Q66JD2

Gene Model

Click here to download ENSXETG00000002305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002305	rab5a	89	35.533	ENSXETG00000014257	mgc75872	98	35.025
ENSXETG00000002305	rab5a	89	41.667	ENSXETG00000025484	rab11b.1	92	41.667
ENSXETG00000002305	rab5a	88	42.932	ENSXETG00000020404	rab25	88	42.932
ENSXETG00000002305	rab5a	90	42.439	ENSXETG00000006639	rab11a	94	42.439
ENSXETG00000002305	rab5a	55	30.328	ENSXETG00000000910	arl8a	60	30.328
ENSXETG00000002305	rab5a	77	42.604	ENSXETG00000016920	rab33b	74	42.604
ENSXETG00000002305	rab5a	71	41.558	ENSXETG00000002201	rab15	73	41.558
ENSXETG00000002305	rab5a	75	36.585	ENSXETG00000032443	RAB39B	77	36.585
ENSXETG00000002305	rab5a	56	32.258	ENSXETG00000005212	arl8b	63	32.258
ENSXETG00000002305	rab5a	76	37.427	ENSXETG00000020622	rab39a	81	37.427
ENSXETG00000002305	rab5a	76	33.939	ENSXETG00000003398	kras	89	33.533
ENSXETG00000002305	rab5a	86	43.548	ENSXETG00000004556	rab18	95	41.919
ENSXETG00000002305	rab5a	81	42.529	ENSXETG00000013633	rab30	86	42.529
ENSXETG00000002305	rab5a	89	37.949	ENSXETG00000026943	rab35	96	38.693
ENSXETG00000002305	rab5a	81	44.000	ENSXETG00000023200	rab6a	93	44.000
ENSXETG00000002305	rab5a	90	41.748	ENSXETG00000021890	rab11b.2	94	41.748
ENSXETG00000002305	rab5a	59	38.281	ENSXETG00000020729	rab13	80	38.281
ENSXETG00000002305	rab5a	55	31.148	ENSXETG00000022124	arl10b	61	31.148
ENSXETG00000002305	rab5a	76	33.939	ENSXETG00000014935	ralb	88	33.533
ENSXETG00000002305	rab5a	80	45.349	ENSXETG00000030938	rab41	82	45.349
ENSXETG00000002305	rab5a	78	41.040	ENSXETG00000016176	rab7a	83	41.040
ENSXETG00000002305	rab5a	78	43.452	ENSXETG00000017184	rab2b	78	43.452
ENSXETG00000002305	rab5a	93	32.353	ENSXETG00000005944	rab7b	99	32.353
ENSXETG00000002305	rab5a	89	34.197	ENSXETG00000008055	rab3b	98	34.197
ENSXETG00000002305	rab5a	78	39.773	ENSXETG00000018183	rab33a	82	39.773
ENSXETG00000002305	rab5a	80	32.768	ENSXETG00000022517	rerg	87	32.768
ENSXETG00000002305	rab5a	76	33.735	ENSXETG00000021449	nras	86	33.735
ENSXETG00000002305	rab5a	81	37.778	ENSXETG00000004289	rab12	58	37.778
ENSXETG00000002305	rab5a	89	39.086	ENSXETG00000011370	rab35	96	39.086
ENSXETG00000002305	rab5a	89	43.878	ENSXETG00000014011	rab1a	96	43.878
ENSXETG00000002305	rab5a	75	31.902	ENSXETG00000006040	hras	85	31.902
ENSXETG00000002305	rab5a	69	35.333	ENSXETG00000007760	rap2b	89	36.196
ENSXETG00000002305	rab5a	75	34.356	ENSXETG00000004449	rab23	73	35.429
ENSXETG00000002305	rab5a	89	34.848	ENSXETG00000013345	rab9a	97	34.848
ENSXETG00000002305	rab5a	89	34.328	ENSXETG00000018133	rab9b	97	34.328
ENSXETG00000002305	rab5a	81	41.143	ENSXETG00000031363	-	84	41.143
ENSXETG00000002305	rab5a	71	36.601	ENSXETG00000015712	rabl2b	66	36.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002305	rab5a	100	92.593	ENSG00000144566	RAB5A	100	92.593	Homo_sapiens
ENSXETG00000002305	rab5a	100	93.519	ENSAPOG00000021391	rab5aa	100	93.519	Acanthochromis_polyacanthus
ENSXETG00000002305	rab5a	100	93.519	ENSAMEG00000000954	RAB5A	100	93.519	Ailuropoda_melanoleuca
ENSXETG00000002305	rab5a	100	93.981	ENSACIG00000019251	rab5aa	100	93.981	Amphilophus_citrinellus
ENSXETG00000002305	rab5a	100	93.056	ENSAOCG00000000090	rab5aa	100	93.056	Amphiprion_ocellaris
ENSXETG00000002305	rab5a	100	93.056	ENSAPEG00000013376	rab5aa	100	93.056	Amphiprion_percula
ENSXETG00000002305	rab5a	100	93.519	ENSATEG00000014748	rab5aa	100	93.519	Anabas_testudineus
ENSXETG00000002305	rab5a	100	92.593	ENSACAG00000000017	RAB5A	100	92.593	Anolis_carolinensis
ENSXETG00000002305	rab5a	100	93.519	ENSANAG00000025120	RAB5A	100	93.519	Aotus_nancymaae
ENSXETG00000002305	rab5a	100	93.056	ENSACLG00000018066	rab5aa	100	93.056	Astatotilapia_calliptera
ENSXETG00000002305	rab5a	100	93.056	ENSAMXG00000036179	rab5aa	100	93.056	Astyanax_mexicanus
ENSXETG00000002305	rab5a	100	90.783	ENSAMXG00000035919	rab5ab	100	90.783	Astyanax_mexicanus
ENSXETG00000002305	rab5a	100	93.519	ENSBTAG00000046385	RAB5A	100	93.519	Bos_taurus
ENSXETG00000002305	rab5a	100	93.519	ENSCJAG00000048394	RAB5A	100	93.519	Callithrix_jacchus
ENSXETG00000002305	rab5a	100	93.519	ENSCAFG00000005814	RAB5A	100	93.519	Canis_familiaris
ENSXETG00000002305	rab5a	100	93.519	ENSCAFG00020027287	RAB5A	100	93.519	Canis_lupus_dingo
ENSXETG00000002305	rab5a	100	93.056	ENSCHIG00000025419	-	100	93.056	Capra_hircus
ENSXETG00000002305	rab5a	98	89.573	ENSTSYG00000030238	-	98	89.573	Carlito_syrichta
ENSXETG00000002305	rab5a	100	93.056	ENSTSYG00000007642	-	100	93.056	Carlito_syrichta
ENSXETG00000002305	rab5a	100	93.519	ENSCCAG00000022405	RAB5A	100	93.519	Cebus_capucinus
ENSXETG00000002305	rab5a	100	93.519	ENSCATG00000033588	-	100	93.519	Cercocebus_atys
ENSXETG00000002305	rab5a	100	92.593	ENSCLAG00000006053	-	100	92.593	Chinchilla_lanigera
ENSXETG00000002305	rab5a	100	93.519	ENSCSAG00000009831	RAB5A	100	93.519	Chlorocebus_sabaeus
ENSXETG00000002305	rab5a	100	92.593	ENSCPBG00000022559	RAB5A	100	92.593	Chrysemys_picta_bellii
ENSXETG00000002305	rab5a	100	93.519	ENSCANG00000043514	RAB5A	100	93.519	Colobus_angolensis_palliatus
ENSXETG00000002305	rab5a	100	93.519	ENSCGRG00001020018	-	100	93.519	Cricetulus_griseus_chok1gshd
ENSXETG00000002305	rab5a	100	93.519	ENSCGRG00000002786	-	100	93.519	Cricetulus_griseus_crigri
ENSXETG00000002305	rab5a	99	93.488	ENSCVAG00000008239	rab5aa	99	93.488	Cyprinodon_variegatus
ENSXETG00000002305	rab5a	100	93.519	ENSDARG00000018602	rab5aa	100	93.519	Danio_rerio
ENSXETG00000002305	rab5a	99	91.163	ENSDARG00000007257	rab5ab	99	91.163	Danio_rerio
ENSXETG00000002305	rab5a	100	93.056	ENSDNOG00000038467	RAB5A	100	93.056	Dasypus_novemcinctus
ENSXETG00000002305	rab5a	100	93.519	ENSDORG00000024958	-	100	93.519	Dipodomys_ordii
ENSXETG00000002305	rab5a	100	93.519	ENSEASG00005005818	RAB5A	100	93.519	Equus_asinus_asinus
ENSXETG00000002305	rab5a	100	93.519	ENSECAG00000019062	RAB5A	100	93.519	Equus_caballus
ENSXETG00000002305	rab5a	100	93.056	ENSEEUG00000009044	RAB5A	100	93.056	Erinaceus_europaeus
ENSXETG00000002305	rab5a	100	93.519	ENSELUG00000006462	rab5aa	100	93.519	Esox_lucius
ENSXETG00000002305	rab5a	99	92.093	ENSELUG00000013436	rab5ab	99	92.093	Esox_lucius
ENSXETG00000002305	rab5a	100	93.519	ENSFCAG00000039795	-	100	93.519	Felis_catus
ENSXETG00000002305	rab5a	100	93.519	ENSFALG00000009239	RAB5A	100	93.519	Ficedula_albicollis
ENSXETG00000002305	rab5a	100	92.593	ENSFDAG00000005631	-	100	92.593	Fukomys_damarensis
ENSXETG00000002305	rab5a	99	93.023	ENSFHEG00000014070	rab5aa	99	93.023	Fundulus_heteroclitus
ENSXETG00000002305	rab5a	99	91.628	ENSGMOG00000002868	rab5aa	99	91.628	Gadus_morhua
ENSXETG00000002305	rab5a	84	93.370	ENSGMOG00000007127	RAB5A	99	93.370	Gadus_morhua
ENSXETG00000002305	rab5a	100	93.519	ENSGALG00000011272	RAB5A	100	93.519	Gallus_gallus
ENSXETG00000002305	rab5a	99	93.023	ENSGAFG00000011619	rab5aa	99	93.023	Gambusia_affinis
ENSXETG00000002305	rab5a	100	92.593	ENSGACG00000004997	rab5aa	100	92.593	Gasterosteus_aculeatus
ENSXETG00000002305	rab5a	100	93.056	ENSGAGG00000005319	RAB5A	100	93.056	Gopherus_agassizii
ENSXETG00000002305	rab5a	100	92.593	ENSGGOG00000015981	RAB5A	100	92.593	Gorilla_gorilla
ENSXETG00000002305	rab5a	100	93.056	ENSHBUG00000003752	rab5aa	100	93.056	Haplochromis_burtoni
ENSXETG00000002305	rab5a	98	86.730	ENSHGLG00000017749	-	95	86.730	Heterocephalus_glaber_female
ENSXETG00000002305	rab5a	97	93.780	ENSHGLG00000006357	-	100	93.780	Heterocephalus_glaber_female
ENSXETG00000002305	rab5a	98	86.256	ENSHGLG00100008816	-	95	86.256	Heterocephalus_glaber_male
ENSXETG00000002305	rab5a	100	93.519	ENSHGLG00100007553	RAB5A	100	93.519	Heterocephalus_glaber_male
ENSXETG00000002305	rab5a	100	91.705	ENSIPUG00000023392	rab5a	100	91.705	Ictalurus_punctatus
ENSXETG00000002305	rab5a	100	93.519	ENSSTOG00000026229	RAB5A	100	93.519	Ictidomys_tridecemlineatus
ENSXETG00000002305	rab5a	100	92.130	ENSJJAG00000020190	Rab5a	100	92.130	Jaculus_jaculus
ENSXETG00000002305	rab5a	100	93.056	ENSKMAG00000005111	rab5aa	100	93.056	Kryptolebias_marmoratus
ENSXETG00000002305	rab5a	97	92.381	ENSLBEG00000002516	rab5aa	93	92.381	Labrus_bergylta
ENSXETG00000002305	rab5a	100	93.056	ENSLACG00000004663	RAB5A	100	93.056	Latimeria_chalumnae
ENSXETG00000002305	rab5a	100	92.130	ENSLOCG00000006591	rab5ab	100	92.130	Lepisosteus_oculatus
ENSXETG00000002305	rab5a	100	93.519	ENSLAFG00000008321	RAB5A	100	93.519	Loxodonta_africana
ENSXETG00000002305	rab5a	100	93.519	ENSMFAG00000002326	RAB5A	100	93.519	Macaca_fascicularis
ENSXETG00000002305	rab5a	83	96.667	ENSMMUG00000006992	RAB5A	91	96.667	Macaca_mulatta
ENSXETG00000002305	rab5a	69	93.333	ENSMMUG00000032398	-	87	93.333	Macaca_mulatta
ENSXETG00000002305	rab5a	100	93.519	ENSMNEG00000039149	-	100	93.519	Macaca_nemestrina
ENSXETG00000002305	rab5a	100	93.519	ENSMLEG00000028944	RAB5A	100	93.519	Mandrillus_leucophaeus
ENSXETG00000002305	rab5a	100	93.519	ENSMAMG00000012573	rab5aa	100	93.519	Mastacembelus_armatus
ENSXETG00000002305	rab5a	100	93.056	ENSMZEG00005005205	rab5aa	100	93.056	Maylandia_zebra
ENSXETG00000002305	rab5a	100	93.981	ENSMGAG00000010961	RAB5A	100	93.981	Meleagris_gallopavo
ENSXETG00000002305	rab5a	100	93.519	ENSMAUG00000011242	-	100	93.519	Mesocricetus_auratus
ENSXETG00000002305	rab5a	100	93.519	ENSMICG00000049130	RAB5A	100	93.519	Microcebus_murinus
ENSXETG00000002305	rab5a	100	93.519	ENSMOCG00000009706	Rab5a	100	93.519	Microtus_ochrogaster
ENSXETG00000002305	rab5a	100	92.593	ENSMMOG00000019135	rab5aa	100	92.593	Mola_mola
ENSXETG00000002305	rab5a	100	93.981	ENSMODG00000014793	RAB5A	97	97.222	Monodelphis_domestica
ENSXETG00000002305	rab5a	100	92.593	ENSMALG00000014929	rab5aa	100	92.593	Monopterus_albus
ENSXETG00000002305	rab5a	100	93.519	MGP_CAROLIEiJ_G0021741	Rab5a	98	96.667	Mus_caroli
ENSXETG00000002305	rab5a	100	93.519	ENSMUSG00000017831	Rab5a	100	93.519	Mus_musculus
ENSXETG00000002305	rab5a	87	93.583	MGP_PahariEiJ_G0020730	Rab5a	99	93.583	Mus_pahari
ENSXETG00000002305	rab5a	100	93.519	ENSMPUG00000013147	RAB5A	100	93.519	Mustela_putorius_furo
ENSXETG00000002305	rab5a	100	93.519	ENSMLUG00000011716	RAB5A	100	93.519	Myotis_lucifugus
ENSXETG00000002305	rab5a	100	94.444	ENSNGAG00000021245	-	100	94.444	Nannospalax_galili
ENSXETG00000002305	rab5a	100	93.056	ENSNBRG00000011763	rab5aa	100	93.056	Neolamprologus_brichardi
ENSXETG00000002305	rab5a	100	93.056	ENSNLEG00000003434	RAB5A	100	93.056	Nomascus_leucogenys
ENSXETG00000002305	rab5a	82	96.629	ENSOPRG00000011278	RAB5A	100	96.629	Ochotona_princeps
ENSXETG00000002305	rab5a	68	97.959	ENSODEG00000000290	-	99	97.959	Octodon_degus
ENSXETG00000002305	rab5a	87	86.316	ENSODEG00000019065	-	99	86.316	Octodon_degus
ENSXETG00000002305	rab5a	100	93.056	ENSONIG00000002425	rab5aa	100	93.056	Oreochromis_niloticus
ENSXETG00000002305	rab5a	99	91.080	ENSOANG00000004989	RAB5A	97	91.080	Ornithorhynchus_anatinus
ENSXETG00000002305	rab5a	100	93.519	ENSOCUG00000012200	RAB5A	100	93.519	Oryctolagus_cuniculus
ENSXETG00000002305	rab5a	100	91.667	ENSORLG00000012261	rab5aa	100	91.667	Oryzias_latipes
ENSXETG00000002305	rab5a	100	91.667	ENSORLG00020020922	rab5aa	100	91.667	Oryzias_latipes_hni
ENSXETG00000002305	rab5a	100	91.667	ENSORLG00015012854	rab5aa	100	91.667	Oryzias_latipes_hsok
ENSXETG00000002305	rab5a	100	90.278	ENSORLG00015017737	rab5ab	100	90.278	Oryzias_latipes_hsok
ENSXETG00000002305	rab5a	100	92.593	ENSOMEG00000010692	rab5aa	100	92.593	Oryzias_melastigma
ENSXETG00000002305	rab5a	100	93.056	ENSOARG00000015722	RAB5A	100	93.056	Ovis_aries
ENSXETG00000002305	rab5a	100	92.166	ENSPPAG00000041763	RAB5A	100	92.166	Pan_paniscus
ENSXETG00000002305	rab5a	100	93.519	ENSPPRG00000001655	-	100	93.519	Panthera_pardus
ENSXETG00000002305	rab5a	100	93.519	ENSPTIG00000021685	RAB5A	100	93.519	Panthera_tigris_altaica
ENSXETG00000002305	rab5a	100	92.166	ENSPTRG00000014682	RAB5A	100	92.166	Pan_troglodytes
ENSXETG00000002305	rab5a	100	93.519	ENSPANG00000001328	RAB5A	100	93.519	Papio_anubis
ENSXETG00000002305	rab5a	100	90.278	ENSPKIG00000010291	RAB5A	100	90.278	Paramormyrops_kingsleyae
ENSXETG00000002305	rab5a	100	93.056	ENSPKIG00000009578	rab5ab	100	93.056	Paramormyrops_kingsleyae
ENSXETG00000002305	rab5a	100	93.056	ENSPSIG00000007157	RAB5A	100	93.056	Pelodiscus_sinensis
ENSXETG00000002305	rab5a	100	93.519	ENSPMGG00000001915	rab5aa	100	93.519	Periophthalmus_magnuspinnatus
ENSXETG00000002305	rab5a	100	93.056	ENSPCIG00000018321	RAB5A	100	93.056	Phascolarctos_cinereus
ENSXETG00000002305	rab5a	99	93.488	ENSPFOG00000011263	rab5aa	99	93.488	Poecilia_formosa
ENSXETG00000002305	rab5a	99	93.488	ENSPLAG00000017838	rab5aa	99	93.488	Poecilia_latipinna
ENSXETG00000002305	rab5a	99	93.488	ENSPMEG00000007238	rab5aa	99	93.488	Poecilia_mexicana
ENSXETG00000002305	rab5a	100	93.056	ENSPPYG00000014074	RAB5A	100	93.056	Pongo_abelii
ENSXETG00000002305	rab5a	100	93.519	ENSPCOG00000013289	RAB5A	100	93.519	Propithecus_coquereli
ENSXETG00000002305	rab5a	100	93.056	ENSPVAG00000006730	RAB5A	100	93.056	Pteropus_vampyrus
ENSXETG00000002305	rab5a	100	93.056	ENSPNYG00000010612	rab5aa	100	93.056	Pundamilia_nyererei
ENSXETG00000002305	rab5a	100	90.323	ENSPNAG00000009496	rab5ab	100	90.323	Pygocentrus_nattereri
ENSXETG00000002305	rab5a	100	93.056	ENSPNAG00000023223	rab5aa	100	93.056	Pygocentrus_nattereri
ENSXETG00000002305	rab5a	100	93.519	ENSRBIG00000036122	RAB5A	100	93.519	Rhinopithecus_bieti
ENSXETG00000002305	rab5a	100	93.519	ENSRROG00000037687	RAB5A	100	93.519	Rhinopithecus_roxellana
ENSXETG00000002305	rab5a	100	92.627	ENSSHAG00000006787	RAB5A	100	92.627	Sarcophilus_harrisii
ENSXETG00000002305	rab5a	100	93.056	ENSSFOG00015014517	rab5a	100	93.056	Scleropages_formosus
ENSXETG00000002305	rab5a	100	90.741	ENSSFOG00015021115	-	100	90.741	Scleropages_formosus
ENSXETG00000002305	rab5a	100	93.519	ENSSMAG00000009229	rab5aa	100	93.519	Scophthalmus_maximus
ENSXETG00000002305	rab5a	100	93.056	ENSSDUG00000009835	rab5aa	100	93.056	Seriola_dumerili
ENSXETG00000002305	rab5a	100	93.056	ENSSLDG00000011069	rab5aa	100	93.056	Seriola_lalandi_dorsalis
ENSXETG00000002305	rab5a	87	96.277	ENSSPUG00000001173	RAB5A	96	96.277	Sphenodon_punctatus
ENSXETG00000002305	rab5a	100	93.056	ENSSPAG00000015678	rab5aa	100	93.056	Stegastes_partitus
ENSXETG00000002305	rab5a	100	93.519	ENSSSCG00000037653	RAB5A	100	93.519	Sus_scrofa
ENSXETG00000002305	rab5a	100	93.056	ENSTGUG00000003236	RAB5A	100	93.056	Taeniopygia_guttata
ENSXETG00000002305	rab5a	99	92.558	ENSTRUG00000024368	rab5aa	99	92.558	Takifugu_rubripes
ENSXETG00000002305	rab5a	100	92.593	ENSTNIG00000009196	rab5aa	100	92.593	Tetraodon_nigroviridis
ENSXETG00000002305	rab5a	100	93.519	ENSTTRG00000001374	RAB5A	100	93.519	Tursiops_truncatus
ENSXETG00000002305	rab5a	100	87.826	ENSUAMG00000027471	RAB5A	99	95.109	Ursus_americanus
ENSXETG00000002305	rab5a	100	93.519	ENSUMAG00000018295	RAB5A	100	93.519	Ursus_maritimus
ENSXETG00000002305	rab5a	100	93.519	ENSVVUG00000000489	RAB5A	100	93.519	Vulpes_vulpes
ENSXETG00000002305	rab5a	99	93.023	ENSXCOG00000020121	rab5aa	99	93.023	Xiphophorus_couchianus
ENSXETG00000002305	rab5a	99	93.488	ENSXMAG00000028889	rab5aa	99	93.488	Xiphophorus_maculatus