EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002498 (Gene tree)
Gene ID: -
Gene Symbol: ddx39b
Alias: -
Full Name: DEAD-box helicase 39B
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 20420 bases
Position: chrGL173388.1:46836-67255
Accession: XB-GENE-478336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000005318	DEAD	PF00270.29	1.5e-18	1	1
ENSXETP00000053126	DEAD	PF00270.29	9.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000005318	-	1293	-	ENSXETP00000005318	430 (aa)	-	F6WK31
ENSXETT00000053126	-	1293	-	ENSXETP00000053126	430 (aa)	-	F7AD52

Gene Model

Click here to download ENSXETG00000002498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002498	ddx39b	81	31.768	ENSXETG00000022984	ddx47	77	32.370
ENSXETG00000002498	ddx39b	99	79.254	ENSXETG00000020607	ddx39a	99	79.254
ENSXETG00000002498	ddx39b	87	31.008	ENSXETG00000013568	ddx20	51	31.008
ENSXETG00000002498	ddx39b	87	32.888	ENSXETG00000020123	eif4a1	90	33.333
ENSXETG00000002498	ddx39b	90	33.247	ENSXETG00000010061	ddx6	79	33.247
ENSXETG00000002498	ddx39b	86	34.309	ENSXETG00000019390	eif4a2	90	34.817
ENSXETG00000002498	ddx39b	85	32.527	ENSXETG00000013720	eif4a3	88	32.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002498	ddx39b	99	83.953	ENSG00000198563	DDX39B	95	97.753	Homo_sapiens
ENSXETG00000002498	ddx39b	99	83.721	ENSAMEG00000009508	DDX39B	99	83.721	Ailuropoda_melanoleuca
ENSXETG00000002498	ddx39b	99	80.653	ENSACIG00000004534	ddx39b	98	81.818	Amphilophus_citrinellus
ENSXETG00000002498	ddx39b	100	80.460	ENSATEG00000012366	ddx39b	100	80.920	Anabas_testudineus
ENSXETG00000002498	ddx39b	99	84.223	ENSACAG00000012240	DDX39B	100	84.223	Anolis_carolinensis
ENSXETG00000002498	ddx39b	99	83.953	ENSANAG00000030372	DDX39B	100	83.953	Aotus_nancymaae
ENSXETG00000002498	ddx39b	99	79.770	ENSACLG00000018759	ddx39b	99	80.000	Astatotilapia_calliptera
ENSXETG00000002498	ddx39b	99	81.279	ENSAMXG00000017837	ddx39b	100	81.279	Astyanax_mexicanus
ENSXETG00000002498	ddx39b	99	84.186	ENSBTAG00000014490	DDX39B	100	84.186	Bos_taurus
ENSXETG00000002498	ddx39b	99	83.953	ENSCJAG00000003152	DDX39B	100	83.953	Callithrix_jacchus
ENSXETG00000002498	ddx39b	99	83.721	ENSCAFG00000000509	DDX39B	100	83.721	Canis_familiaris
ENSXETG00000002498	ddx39b	99	83.721	ENSCAFG00020020530	DDX39B	100	83.721	Canis_lupus_dingo
ENSXETG00000002498	ddx39b	99	84.186	ENSCHIG00000004579	DDX39B	100	84.186	Capra_hircus
ENSXETG00000002498	ddx39b	99	73.660	ENSTSYG00000029741	-	94	69.312	Carlito_syrichta
ENSXETG00000002498	ddx39b	99	83.953	ENSTSYG00000010226	-	100	83.953	Carlito_syrichta
ENSXETG00000002498	ddx39b	99	83.721	ENSCAPG00000010066	DDX39B	100	83.721	Cavia_aperea
ENSXETG00000002498	ddx39b	99	83.721	ENSCPOG00000002335	DDX39B	100	83.721	Cavia_porcellus
ENSXETG00000002498	ddx39b	99	83.953	ENSCCAG00000027897	DDX39B	100	83.953	Cebus_capucinus
ENSXETG00000002498	ddx39b	98	75.410	ENSCATG00000043709	DDX39B	99	75.410	Cercocebus_atys
ENSXETG00000002498	ddx39b	99	83.721	ENSCLAG00000014555	DDX39B	100	83.721	Chinchilla_lanigera
ENSXETG00000002498	ddx39b	98	83.607	ENSCSAG00000008517	DDX39B	100	83.607	Chlorocebus_sabaeus
ENSXETG00000002498	ddx39b	61	85.985	ENSCPBG00000014671	-	96	85.985	Chrysemys_picta_bellii
ENSXETG00000002498	ddx39b	99	83.953	ENSCANG00000041217	DDX39B	100	83.953	Colobus_angolensis_palliatus
ENSXETG00000002498	ddx39b	83	68.611	ENSCGRG00001021916	-	89	68.611	Cricetulus_griseus_chok1gshd
ENSXETG00000002498	ddx39b	57	73.279	ENSCGRG00001017315	-	95	68.269	Cricetulus_griseus_chok1gshd
ENSXETG00000002498	ddx39b	57	73.279	ENSCGRG00000012479	-	76	73.279	Cricetulus_griseus_crigri
ENSXETG00000002498	ddx39b	99	81.465	ENSDARG00000036069	ddx39b	100	81.693	Danio_rerio
ENSXETG00000002498	ddx39b	99	83.953	ENSDNOG00000010215	DDX39B	100	83.953	Dasypus_novemcinctus
ENSXETG00000002498	ddx39b	99	69.977	ENSDORG00000004985	Ddx39b	100	81.915	Dipodomys_ordii
ENSXETG00000002498	ddx39b	87	69.681	ENSETEG00000009649	DDX39B	87	69.681	Echinops_telfairi
ENSXETG00000002498	ddx39b	99	83.953	ENSEASG00005017156	DDX39B	100	83.953	Equus_asinus_asinus
ENSXETG00000002498	ddx39b	99	83.953	ENSECAG00000007750	DDX39B	100	83.953	Equus_caballus
ENSXETG00000002498	ddx39b	100	80.324	ENSELUG00000017904	ddx39b	100	81.019	Esox_lucius
ENSXETG00000002498	ddx39b	99	83.721	ENSFCAG00000004497	DDX39B	100	83.721	Felis_catus
ENSXETG00000002498	ddx39b	99	83.721	ENSFDAG00000011074	DDX39B	100	83.721	Fukomys_damarensis
ENSXETG00000002498	ddx39b	85	74.064	ENSGAGG00000001300	-	80	83.019	Gopherus_agassizii
ENSXETG00000002498	ddx39b	99	83.953	ENSGGOG00000005989	DDX39B	100	83.953	Gorilla_gorilla
ENSXETG00000002498	ddx39b	99	83.488	ENSHGLG00000019248	DDX39B	100	83.488	Heterocephalus_glaber_female
ENSXETG00000002498	ddx39b	99	83.488	ENSHGLG00100011850	DDX39B	100	83.488	Heterocephalus_glaber_male
ENSXETG00000002498	ddx39b	99	81.050	ENSIPUG00000015733	DDX39B	94	81.507	Ictalurus_punctatus
ENSXETG00000002498	ddx39b	99	83.721	ENSSTOG00000012838	DDX39B	100	83.721	Ictidomys_tridecemlineatus
ENSXETG00000002498	ddx39b	99	83.488	ENSJJAG00000005660	-	100	83.488	Jaculus_jaculus
ENSXETG00000002498	ddx39b	66	65.371	ENSLBEG00000017177	-	81	65.398	Labrus_bergylta
ENSXETG00000002498	ddx39b	99	68.000	ENSLBEG00000012254	ddx39b	99	68.000	Labrus_bergylta
ENSXETG00000002498	ddx39b	99	76.376	ENSLACG00000002110	DDX39B	100	76.376	Latimeria_chalumnae
ENSXETG00000002498	ddx39b	99	83.721	ENSLAFG00000014202	DDX39B	100	83.721	Loxodonta_africana
ENSXETG00000002498	ddx39b	99	83.953	ENSMFAG00000034233	DDX39B	100	83.953	Macaca_fascicularis
ENSXETG00000002498	ddx39b	99	83.953	ENSMMUG00000008839	DDX39B	100	83.953	Macaca_mulatta
ENSXETG00000002498	ddx39b	99	83.953	ENSMNEG00000041059	DDX39B	100	83.953	Macaca_nemestrina
ENSXETG00000002498	ddx39b	99	83.953	ENSMLEG00000043791	DDX39B	100	83.953	Mandrillus_leucophaeus
ENSXETG00000002498	ddx39b	99	79.499	ENSMZEG00005017654	ddx39b	99	79.727	Maylandia_zebra
ENSXETG00000002498	ddx39b	99	83.721	ENSMAUG00000008059	Ddx39b	100	83.721	Mesocricetus_auratus
ENSXETG00000002498	ddx39b	99	83.953	ENSMICG00000017349	DDX39B	100	83.953	Microcebus_murinus
ENSXETG00000002498	ddx39b	99	83.721	ENSMOCG00000011169	Ddx39b	100	83.721	Microtus_ochrogaster
ENSXETG00000002498	ddx39b	87	82.011	ENSMODG00000015791	DDX39B	88	82.011	Monodelphis_domestica
ENSXETG00000002498	ddx39b	99	83.953	ENSMUSG00000019432	Ddx39b	100	83.953	Mus_musculus
ENSXETG00000002498	ddx39b	99	83.953	MGP_PahariEiJ_G0020513	Ddx39b	100	83.953	Mus_pahari
ENSXETG00000002498	ddx39b	99	83.953	MGP_SPRETEiJ_G0022424	Ddx39b	100	83.953	Mus_spretus
ENSXETG00000002498	ddx39b	99	83.721	ENSMPUG00000011407	DDX39B	100	83.721	Mustela_putorius_furo
ENSXETG00000002498	ddx39b	72	82.428	ENSMLUG00000001681	DDX39B	100	82.428	Myotis_lucifugus
ENSXETG00000002498	ddx39b	99	83.953	ENSNGAG00000022948	Ddx39b	100	83.953	Nannospalax_galili
ENSXETG00000002498	ddx39b	78	85.985	ENSNLEG00000006094	DDX39B	94	85.985	Nomascus_leucogenys
ENSXETG00000002498	ddx39b	85	98.198	ENSMEUG00000008264	DDX39B	86	98.198	Notamacropus_eugenii
ENSXETG00000002498	ddx39b	99	83.721	ENSOPRG00000011923	DDX39B	100	83.721	Ochotona_princeps
ENSXETG00000002498	ddx39b	99	83.488	ENSODEG00000018083	DDX39B	100	83.488	Octodon_degus
ENSXETG00000002498	ddx39b	99	80.876	ENSONIG00000004740	ddx39b	100	81.106	Oreochromis_niloticus
ENSXETG00000002498	ddx39b	55	71.967	ENSOANG00000008361	DDX39B	95	71.967	Ornithorhynchus_anatinus
ENSXETG00000002498	ddx39b	99	80.674	ENSOCUG00000024126	DDX39B	100	80.674	Oryctolagus_cuniculus
ENSXETG00000002498	ddx39b	100	81.628	ENSOGAG00000028850	-	100	82.599	Otolemur_garnettii
ENSXETG00000002498	ddx39b	84	77.926	ENSOGAG00000009067	-	100	81.595	Otolemur_garnettii
ENSXETG00000002498	ddx39b	99	84.186	ENSOARG00000008787	DDX39B	98	84.186	Ovis_aries
ENSXETG00000002498	ddx39b	99	83.953	ENSPPAG00000043072	DDX39B	100	83.953	Pan_paniscus
ENSXETG00000002498	ddx39b	99	83.721	ENSPPRG00000001913	DDX39B	100	83.721	Panthera_pardus
ENSXETG00000002498	ddx39b	99	83.488	ENSPTIG00000017669	DDX39B	100	83.488	Panthera_tigris_altaica
ENSXETG00000002498	ddx39b	99	83.953	ENSPTRG00000032509	DDX39B	100	83.953	Pan_troglodytes
ENSXETG00000002498	ddx39b	99	83.953	ENSPANG00000018609	DDX39B	100	83.953	Papio_anubis
ENSXETG00000002498	ddx39b	99	80.410	ENSPKIG00000011324	ddx39b	100	80.638	Paramormyrops_kingsleyae
ENSXETG00000002498	ddx39b	99	83.721	ENSPEMG00000016905	Ddx39b	100	83.721	Peromyscus_maniculatus_bairdii
ENSXETG00000002498	ddx39b	99	83.953	ENSPCIG00000017572	DDX39B	100	83.953	Phascolarctos_cinereus
ENSXETG00000002498	ddx39b	99	83.953	ENSPPYG00000016433	DDX39B	100	83.953	Pongo_abelii
ENSXETG00000002498	ddx39b	61	85.606	ENSPCAG00000003484	DDX39B	92	85.606	Procavia_capensis
ENSXETG00000002498	ddx39b	99	83.953	ENSPCOG00000018656	DDX39B	100	83.953	Propithecus_coquereli
ENSXETG00000002498	ddx39b	99	84.186	ENSPVAG00000004653	DDX39B	100	84.186	Pteropus_vampyrus
ENSXETG00000002498	ddx39b	97	80.095	ENSPNYG00000010382	ddx39b	98	80.471	Pundamilia_nyererei
ENSXETG00000002498	ddx39b	99	80.822	ENSPNAG00000026926	ddx39b	100	80.822	Pygocentrus_nattereri
ENSXETG00000002498	ddx39b	99	83.953	ENSRNOG00000000841	Ddx39b	100	83.953	Rattus_norvegicus
ENSXETG00000002498	ddx39b	99	73.953	ENSRBIG00000031309	DDX39B	100	73.953	Rhinopithecus_bieti
ENSXETG00000002498	ddx39b	99	83.953	ENSRROG00000039517	DDX39B	100	83.953	Rhinopithecus_roxellana
ENSXETG00000002498	ddx39b	99	73.953	ENSSBOG00000035513	-	100	73.953	Saimiri_boliviensis_boliviensis
ENSXETG00000002498	ddx39b	99	83.953	ENSSHAG00000003209	DDX39B	100	83.953	Sarcophilus_harrisii
ENSXETG00000002498	ddx39b	99	80.866	ENSSFOG00015016107	ddx39b	100	80.866	Scleropages_formosus
ENSXETG00000002498	ddx39b	100	80.184	ENSSDUG00000011557	ddx39b	100	81.609	Seriola_dumerili
ENSXETG00000002498	ddx39b	100	79.954	ENSSLDG00000015763	ddx39b	100	81.379	Seriola_lalandi_dorsalis
ENSXETG00000002498	ddx39b	87	70.479	ENSSARG00000005245	DDX39B	100	70.479	Sorex_araneus
ENSXETG00000002498	ddx39b	99	84.419	ENSSPUG00000012805	DDX39B	100	84.419	Sphenodon_punctatus
ENSXETG00000002498	ddx39b	99	83.953	ENSSSCG00000001400	DDX39B	100	83.908	Sus_scrofa
ENSXETG00000002498	ddx39b	99	61.395	ENSTBEG00000003721	DDX39B	100	61.395	Tupaia_belangeri
ENSXETG00000002498	ddx39b	100	81.293	ENSTTRG00000014074	DDX39B	100	81.293	Tursiops_truncatus
ENSXETG00000002498	ddx39b	100	76.047	ENSUAMG00000027335	DDX39B	100	76.047	Ursus_americanus
ENSXETG00000002498	ddx39b	99	74.884	ENSUMAG00000015124	DDX39B	100	74.884	Ursus_maritimus
ENSXETG00000002498	ddx39b	61	87.611	ENSVPAG00000009167	-	74	87.611	Vicugna_pacos
ENSXETG00000002498	ddx39b	99	83.721	ENSVVUG00000019518	DDX39B	99	83.721	Vulpes_vulpes