EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002540 (Gene tree)
Gene ID: -
Gene Symbol: arl1
Alias: -
Full Name: Xenopus tropicalis ADP ribosylation factor like GTPase 1 (arl1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9171 bases
Position: chrGL172879.1:440686-449856
Accession: NM_001016396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000005404	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000005404	-	1213	-	ENSXETP00000005404	181 (aa)	-	Q5BJ82

Gene Model

Click here to download ENSXETG00000002540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002540	arl1	97	39.011	ENSXETG00000011342	arl4a	85	40.000
ENSXETG00000002540	arl1	97	39.227	ENSXETG00000010915	arl4c	89	40.116
ENSXETG00000002540	arl1	93	44.970	ENSXETG00000022343	arl3l2	79	57.317
ENSXETG00000002540	arl1	92	44.578	ENSXETG00000015225	arl3	91	44.578
ENSXETG00000002540	arl1	91	31.737	ENSXETG00000022337	arl10	67	31.737
ENSXETG00000002540	arl1	100	56.354	ENSXETG00000013916	arf5	92	57.229
ENSXETG00000002540	arl1	96	49.133	ENSXETG00000023713	arl5c	82	49.057
ENSXETG00000002540	arl1	96	46.243	ENSXETG00000022765	arl5b	88	47.799
ENSXETG00000002540	arl1	99	48.901	ENSXETG00000021692	arl5a	92	49.701
ENSXETG00000002540	arl1	100	56.906	ENSXETG00000014250	arf1	92	57.831
ENSXETG00000002540	arl1	99	58.333	ENSXETG00000008654	arf4	92	58.182
ENSXETG00000002540	arl1	91	44.242	ENSXETG00000001661	arl2	90	44.242
ENSXETG00000002540	arl1	100	56.354	ENSXETG00000011174	arf3	92	57.831
ENSXETG00000002540	arl1	93	41.176	ENSXETG00000015673	arl11	93	42.073
ENSXETG00000002540	arl1	96	35.057	ENSXETG00000022124	arl10b	88	34.337
ENSXETG00000002540	arl1	96	32.759	ENSXETG00000005212	arl8b	89	31.928
ENSXETG00000002540	arl1	96	33.333	ENSXETG00000000910	arl8a	87	33.133
ENSXETG00000002540	arl1	94	40.698	ENSXETG00000008725	arl14	83	40.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002540	arl1	100	96.685	ENSG00000120805	ARL1	100	96.685	Homo_sapiens
ENSXETG00000002540	arl1	100	94.475	ENSAPOG00000002469	arl1	95	95.808	Acanthochromis_polyacanthus
ENSXETG00000002540	arl1	92	96.407	ENSAMEG00000016452	ARL1	92	96.407	Ailuropoda_melanoleuca
ENSXETG00000002540	arl1	99	93.296	ENSACIG00000007953	arl1	93	94.012	Amphilophus_citrinellus
ENSXETG00000002540	arl1	100	94.475	ENSAOCG00000013008	arl1	92	95.808	Amphiprion_ocellaris
ENSXETG00000002540	arl1	100	94.475	ENSAPEG00000013187	arl1	95	95.808	Amphiprion_percula
ENSXETG00000002540	arl1	99	96.089	ENSATEG00000005559	arl1	96	96.089	Anabas_testudineus
ENSXETG00000002540	arl1	100	96.133	ENSAPLG00000016092	ARL1	100	96.133	Anas_platyrhynchos
ENSXETG00000002540	arl1	100	97.238	ENSACAG00000011602	ARL1	100	97.238	Anolis_carolinensis
ENSXETG00000002540	arl1	100	97.238	ENSANAG00000023491	ARL1	100	97.238	Aotus_nancymaae
ENSXETG00000002540	arl1	100	95.580	ENSACLG00000008188	arl1	92	96.407	Astatotilapia_calliptera
ENSXETG00000002540	arl1	100	97.238	ENSAMXG00000021056	arl1	100	97.238	Astyanax_mexicanus
ENSXETG00000002540	arl1	100	97.238	ENSBTAG00000011883	ARL1	100	97.238	Bos_taurus
ENSXETG00000002540	arl1	100	72.928	WBGene00000187	arl-1	93	74.251	Caenorhabditis_elegans
ENSXETG00000002540	arl1	100	97.238	ENSCJAG00000001966	ARL1	100	97.238	Callithrix_jacchus
ENSXETG00000002540	arl1	100	97.238	ENSCAFG00000006992	ARL1	100	97.238	Canis_familiaris
ENSXETG00000002540	arl1	100	97.238	ENSCAFG00020024333	ARL1	100	97.238	Canis_lupus_dingo
ENSXETG00000002540	arl1	94	97.059	ENSCHIG00000024524	ARL1	100	97.059	Capra_hircus
ENSXETG00000002540	arl1	99	97.207	ENSTSYG00000013257	-	100	97.207	Carlito_syrichta
ENSXETG00000002540	arl1	76	95.652	ENSCAPG00000001010	ARL1	100	95.652	Cavia_aperea
ENSXETG00000002540	arl1	92	95.808	ENSCPOG00000026014	ARL1	92	95.808	Cavia_porcellus
ENSXETG00000002540	arl1	100	97.238	ENSCCAG00000025938	ARL1	100	97.238	Cebus_capucinus
ENSXETG00000002540	arl1	92	95.808	ENSCLAG00000008180	ARL1	92	95.808	Chinchilla_lanigera
ENSXETG00000002540	arl1	100	96.685	ENSCSAG00000003368	ARL1	100	96.685	Chlorocebus_sabaeus
ENSXETG00000002540	arl1	100	96.685	ENSCPBG00000004906	ARL1	100	96.685	Chrysemys_picta_bellii
ENSXETG00000002540	arl1	93	44.706	ENSCING00000004577	-	95	44.643	Ciona_intestinalis
ENSXETG00000002540	arl1	99	80.000	ENSCING00000019794	-	92	79.394	Ciona_intestinalis
ENSXETG00000002540	arl1	99	79.444	ENSCSAVG00000007620	-	90	78.788	Ciona_savignyi
ENSXETG00000002540	arl1	92	95.808	ENSCANG00000033548	ARL1	92	95.808	Colobus_angolensis_palliatus
ENSXETG00000002540	arl1	100	96.685	ENSCGRG00001010446	Arl1	100	96.685	Cricetulus_griseus_chok1gshd
ENSXETG00000002540	arl1	92	95.808	ENSCGRG00000009856	Arl1	83	95.808	Cricetulus_griseus_crigri
ENSXETG00000002540	arl1	100	94.475	ENSCVAG00000001731	arl1	92	95.210	Cyprinodon_variegatus
ENSXETG00000002540	arl1	100	96.685	ENSDARG00000101680	arl1	100	96.685	Danio_rerio
ENSXETG00000002540	arl1	100	96.685	ENSDORG00000014770	Arl1	95	96.685	Dipodomys_ordii
ENSXETG00000002540	arl1	100	78.453	FBgn0000115	Arl1	93	80.838	Drosophila_melanogaster
ENSXETG00000002540	arl1	98	94.382	ENSETEG00000020310	ARL1	94	94.048	Echinops_telfairi
ENSXETG00000002540	arl1	100	97.238	ENSEASG00005020057	ARL1	100	97.238	Equus_asinus_asinus
ENSXETG00000002540	arl1	100	97.238	ENSECAG00000000372	ARL1	100	97.238	Equus_caballus
ENSXETG00000002540	arl1	100	95.580	ENSELUG00000001287	-	92	96.407	Esox_lucius
ENSXETG00000002540	arl1	100	95.580	ENSELUG00000018440	arl1	92	97.006	Esox_lucius
ENSXETG00000002540	arl1	100	97.238	ENSFCAG00000030871	ARL1	100	97.238	Felis_catus
ENSXETG00000002540	arl1	100	96.685	ENSFALG00000011156	ARL1	100	96.685	Ficedula_albicollis
ENSXETG00000002540	arl1	92	95.808	ENSFDAG00000016393	ARL1	92	95.808	Fukomys_damarensis
ENSXETG00000002540	arl1	99	94.972	ENSFHEG00000004171	arl1	88	95.808	Fundulus_heteroclitus
ENSXETG00000002540	arl1	100	95.580	ENSGMOG00000006859	arl1	92	96.407	Gadus_morhua
ENSXETG00000002540	arl1	100	96.685	ENSGALG00000011651	ARL1	100	96.685	Gallus_gallus
ENSXETG00000002540	arl1	91	95.758	ENSGAFG00000006973	arl1	95	96.835	Gambusia_affinis
ENSXETG00000002540	arl1	100	93.923	ENSGACG00000019098	arl1	92	95.210	Gasterosteus_aculeatus
ENSXETG00000002540	arl1	100	96.685	ENSGGOG00000010788	ARL1	100	96.685	Gorilla_gorilla
ENSXETG00000002540	arl1	100	95.580	ENSHBUG00000010636	arl1	92	96.407	Haplochromis_burtoni
ENSXETG00000002540	arl1	100	96.685	ENSHGLG00000004909	ARL1	100	96.685	Heterocephalus_glaber_female
ENSXETG00000002540	arl1	92	96.407	ENSHGLG00100001832	ARL1	92	96.407	Heterocephalus_glaber_male
ENSXETG00000002540	arl1	100	96.133	ENSHCOG00000005566	arl1	100	96.133	Hippocampus_comes
ENSXETG00000002540	arl1	99	96.648	ENSIPUG00000013834	arl1	96	96.648	Ictalurus_punctatus
ENSXETG00000002540	arl1	100	97.238	ENSSTOG00000016022	ARL1	100	97.238	Ictidomys_tridecemlineatus
ENSXETG00000002540	arl1	92	86.826	ENSJJAG00000000452	-	92	86.826	Jaculus_jaculus
ENSXETG00000002540	arl1	86	97.419	ENSKMAG00000005931	arl1	84	97.419	Kryptolebias_marmoratus
ENSXETG00000002540	arl1	96	94.253	ENSLBEG00000000991	arl1	95	95.210	Labrus_bergylta
ENSXETG00000002540	arl1	100	97.238	ENSLAFG00000026143	ARL1	95	97.238	Loxodonta_africana
ENSXETG00000002540	arl1	100	96.685	ENSMFAG00000035725	ARL1	100	96.685	Macaca_fascicularis
ENSXETG00000002540	arl1	92	96.407	ENSMMUG00000031610	ARL1	92	96.407	Macaca_mulatta
ENSXETG00000002540	arl1	100	96.685	ENSMNEG00000007067	ARL1	100	96.685	Macaca_nemestrina
ENSXETG00000002540	arl1	91	96.341	ENSMLEG00000036143	ARL1	100	96.341	Mandrillus_leucophaeus
ENSXETG00000002540	arl1	99	94.413	ENSMAMG00000001968	arl1	100	94.413	Mastacembelus_armatus
ENSXETG00000002540	arl1	100	95.580	ENSMZEG00005018136	arl1	92	96.407	Maylandia_zebra
ENSXETG00000002540	arl1	100	96.133	ENSMGAG00000011748	ARL1	100	96.133	Meleagris_gallopavo
ENSXETG00000002540	arl1	92	95.808	ENSMAUG00000021923	Arl1	92	95.808	Mesocricetus_auratus
ENSXETG00000002540	arl1	100	97.238	ENSMICG00000015801	ARL1	100	97.238	Microcebus_murinus
ENSXETG00000002540	arl1	100	96.685	ENSMOCG00000005852	Arl1	100	96.685	Microtus_ochrogaster
ENSXETG00000002540	arl1	96	91.954	ENSMMOG00000003353	arl1	63	94.375	Mola_mola
ENSXETG00000002540	arl1	100	96.685	ENSMODG00000003056	ARL1	100	96.685	Monodelphis_domestica
ENSXETG00000002540	arl1	99	92.179	ENSMALG00000003003	arl1	99	95.152	Monopterus_albus
ENSXETG00000002540	arl1	100	96.685	MGP_CAROLIEiJ_G0015712	Arl1	100	96.685	Mus_caroli
ENSXETG00000002540	arl1	100	96.685	ENSMUSG00000060904	Arl1	100	96.685	Mus_musculus
ENSXETG00000002540	arl1	100	96.685	MGP_PahariEiJ_G0031373	Arl1	100	96.685	Mus_pahari
ENSXETG00000002540	arl1	100	96.685	MGP_SPRETEiJ_G0016530	Arl1	100	96.685	Mus_spretus
ENSXETG00000002540	arl1	99	96.685	ENSMPUG00000011822	ARL1	99	96.685	Mustela_putorius_furo
ENSXETG00000002540	arl1	92	91.617	ENSMLUG00000025321	-	92	91.617	Myotis_lucifugus
ENSXETG00000002540	arl1	95	97.093	ENSMLUG00000002351	-	100	97.093	Myotis_lucifugus
ENSXETG00000002540	arl1	76	96.377	ENSNGAG00000007879	-	100	96.377	Nannospalax_galili
ENSXETG00000002540	arl1	100	95.580	ENSNBRG00000019783	arl1	92	96.407	Neolamprologus_brichardi
ENSXETG00000002540	arl1	91	96.341	ENSNLEG00000006223	ARL1	100	96.341	Nomascus_leucogenys
ENSXETG00000002540	arl1	100	96.685	ENSMEUG00000015525	ARL1	95	96.685	Notamacropus_eugenii
ENSXETG00000002540	arl1	100	96.685	ENSODEG00000019783	-	100	96.685	Octodon_degus
ENSXETG00000002540	arl1	99	96.667	ENSODEG00000010531	-	100	96.667	Octodon_degus
ENSXETG00000002540	arl1	92	94.611	ENSODEG00000019880	-	92	94.611	Octodon_degus
ENSXETG00000002540	arl1	100	95.580	ENSONIG00000009921	arl1	92	96.407	Oreochromis_niloticus
ENSXETG00000002540	arl1	100	97.238	ENSOCUG00000002217	ARL1	96	97.238	Oryctolagus_cuniculus
ENSXETG00000002540	arl1	92	95.181	ENSORLG00000008909	arl1	93	96.835	Oryzias_latipes
ENSXETG00000002540	arl1	100	95.580	ENSORLG00020005754	arl1	93	96.407	Oryzias_latipes_hni
ENSXETG00000002540	arl1	100	95.580	ENSORLG00015002736	arl1	93	96.835	Oryzias_latipes_hsok
ENSXETG00000002540	arl1	96	95.402	ENSOMEG00000023497	arl1	89	96.407	Oryzias_melastigma
ENSXETG00000002540	arl1	100	96.685	ENSOGAG00000015144	ARL1	100	96.685	Otolemur_garnettii
ENSXETG00000002540	arl1	100	97.238	ENSOARG00000015007	ARL1	100	97.238	Ovis_aries
ENSXETG00000002540	arl1	100	96.685	ENSPPAG00000034860	ARL1	100	96.685	Pan_paniscus
ENSXETG00000002540	arl1	100	97.238	ENSPPRG00000023908	ARL1	100	97.238	Panthera_pardus
ENSXETG00000002540	arl1	99	97.207	ENSPTIG00000002154	-	100	97.207	Panthera_tigris_altaica
ENSXETG00000002540	arl1	100	96.685	ENSPTRG00000005350	ARL1	100	96.685	Pan_troglodytes
ENSXETG00000002540	arl1	99	96.648	ENSPANG00000018816	ARL1	97	96.648	Papio_anubis
ENSXETG00000002540	arl1	100	96.685	ENSPKIG00000007118	arl1	100	98.171	Paramormyrops_kingsleyae
ENSXETG00000002540	arl1	100	97.238	ENSPSIG00000006539	ARL1	100	97.238	Pelodiscus_sinensis
ENSXETG00000002540	arl1	91	92.121	ENSPMGG00000004070	arl1	93	93.038	Periophthalmus_magnuspinnatus
ENSXETG00000002540	arl1	100	96.685	ENSPEMG00000008781	Arl1	100	96.685	Peromyscus_maniculatus_bairdii
ENSXETG00000002540	arl1	100	92.265	ENSPMAG00000002070	arl1	92	95.210	Petromyzon_marinus
ENSXETG00000002540	arl1	99	96.667	ENSPCIG00000009683	-	97	96.667	Phascolarctos_cinereus
ENSXETG00000002540	arl1	100	95.028	ENSPFOG00000003241	arl1	92	95.808	Poecilia_formosa
ENSXETG00000002540	arl1	100	95.028	ENSPLAG00000012898	arl1	92	95.808	Poecilia_latipinna
ENSXETG00000002540	arl1	99	95.000	ENSPMEG00000005938	arl1	89	95.808	Poecilia_mexicana
ENSXETG00000002540	arl1	99	95.000	ENSPREG00000013361	arl1	89	95.808	Poecilia_reticulata
ENSXETG00000002540	arl1	100	96.685	ENSPPYG00000004872	ARL1	100	96.685	Pongo_abelii
ENSXETG00000002540	arl1	100	93.370	ENSPCOG00000015554	-	94	95.210	Propithecus_coquereli
ENSXETG00000002540	arl1	100	97.238	ENSPVAG00000008119	ARL1	95	97.238	Pteropus_vampyrus
ENSXETG00000002540	arl1	100	95.580	ENSPNYG00000011671	arl1	92	96.407	Pundamilia_nyererei
ENSXETG00000002540	arl1	91	96.970	ENSPNAG00000028795	arl1	99	96.970	Pygocentrus_nattereri
ENSXETG00000002540	arl1	100	96.685	ENSRNOG00000005763	Arl1	100	96.685	Rattus_norvegicus
ENSXETG00000002540	arl1	100	96.685	ENSRBIG00000042560	ARL1	100	96.685	Rhinopithecus_bieti
ENSXETG00000002540	arl1	100	96.685	ENSRROG00000037996	ARL1	100	96.685	Rhinopithecus_roxellana
ENSXETG00000002540	arl1	100	97.238	ENSSBOG00000024352	-	100	97.238	Saimiri_boliviensis_boliviensis
ENSXETG00000002540	arl1	100	96.133	ENSSHAG00000004634	ARL1	100	96.133	Sarcophilus_harrisii
ENSXETG00000002540	arl1	100	96.685	ENSSFOG00015001665	arl1	100	96.685	Scleropages_formosus
ENSXETG00000002540	arl1	100	96.133	ENSSMAG00000016416	arl1	100	96.133	Scophthalmus_maximus
ENSXETG00000002540	arl1	93	94.675	ENSSDUG00000013898	arl1	89	97.468	Seriola_dumerili
ENSXETG00000002540	arl1	100	96.133	ENSSLDG00000012946	arl1	100	96.133	Seriola_lalandi_dorsalis
ENSXETG00000002540	arl1	93	95.833	ENSSARG00000013944	ARL1	93	95.808	Sorex_araneus
ENSXETG00000002540	arl1	100	97.238	ENSSPUG00000004578	ARL1	100	97.238	Sphenodon_punctatus
ENSXETG00000002540	arl1	100	95.028	ENSSPAG00000014633	arl1	93	96.407	Stegastes_partitus
ENSXETG00000002540	arl1	100	97.238	ENSSSCG00000000870	ARL1	100	97.238	Sus_scrofa
ENSXETG00000002540	arl1	99	96.648	ENSTGUG00000009085	-	100	96.648	Taeniopygia_guttata
ENSXETG00000002540	arl1	100	93.370	ENSTRUG00000006254	arl1	92	94.012	Takifugu_rubripes
ENSXETG00000002540	arl1	100	92.818	ENSTNIG00000006920	arl1	92	94.012	Tetraodon_nigroviridis
ENSXETG00000002540	arl1	92	95.238	ENSTBEG00000015546	ARL1	92	95.238	Tupaia_belangeri
ENSXETG00000002540	arl1	100	97.238	ENSTTRG00000017202	ARL1	95	97.238	Tursiops_truncatus
ENSXETG00000002540	arl1	100	97.238	ENSUMAG00000019547	ARL1	100	97.238	Ursus_maritimus
ENSXETG00000002540	arl1	100	97.238	ENSVPAG00000011621	ARL1	95	97.238	Vicugna_pacos
ENSXETG00000002540	arl1	100	97.238	ENSVVUG00000018044	ARL1	100	97.238	Vulpes_vulpes
ENSXETG00000002540	arl1	99	93.296	ENSXMAG00000028338	arl1	96	96.269	Xiphophorus_maculatus