EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002690 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 2124 bases
Position: chrGL176520.1:1126-3249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	1	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	2	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	3	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	4	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	5	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	6	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	7	8
ENSXETP00000005782	zf-C2H2	PF00096.26	3.4e-37	8	8
ENSXETP00000005782	zf-met	PF12874.7	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000005782	-	1362	-	ENSXETP00000005782	454 (aa)	-	F6ZDY0

Gene Model

Click here to download ENSXETG00000002690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002690	-	54	51.174	ENSXETG00000006490	znf350	94	51.174
ENSXETG00000002690	-	55	41.975	ENSXETG00000001980	znf408	77	41.975
ENSXETG00000002690	-	63	53.191	ENSXETG00000023643	znf484	100	53.191
ENSXETG00000002690	-	87	48.223	ENSXETG00000031310	-	86	48.223
ENSXETG00000002690	-	54	48.636	ENSXETG00000032038	-	93	48.636
ENSXETG00000002690	-	58	41.558	ENSXETG00000027366	snai1	83	41.558
ENSXETG00000002690	-	56	39.450	ENSXETG00000027536	znf574	58	39.450
ENSXETG00000002690	-	55	48.178	ENSXETG00000034213	-	99	48.178
ENSXETG00000002690	-	58	52.466	ENSXETG00000025282	-	99	52.466
ENSXETG00000002690	-	58	51.852	ENSXETG00000017175	-	100	51.852
ENSXETG00000002690	-	56	44.681	ENSXETG00000015125	-	95	44.681
ENSXETG00000002690	-	54	53.982	ENSXETG00000016781	-	99	53.982
ENSXETG00000002690	-	63	53.846	ENSXETG00000027149	-	100	53.846
ENSXETG00000002690	-	71	42.857	ENSXETG00000016091	e4f1	67	31.541
ENSXETG00000002690	-	75	54.299	ENSXETG00000031460	-	99	54.299
ENSXETG00000002690	-	93	45.802	ENSXETG00000002279	zbtb14	59	45.802
ENSXETG00000002690	-	67	38.342	ENSXETG00000006162	zbtb47	54	38.342
ENSXETG00000002690	-	66	53.441	ENSXETG00000023597	-	100	53.441
ENSXETG00000002690	-	54	37.037	ENSXETG00000002339	znf423	61	37.037
ENSXETG00000002690	-	54	57.082	ENSXETG00000024118	-	100	57.082
ENSXETG00000002690	-	57	44.934	ENSXETG00000008801	znf628	96	44.737
ENSXETG00000002690	-	67	36.800	ENSXETG00000012506	znf91	99	37.313
ENSXETG00000002690	-	91	51.807	ENSXETG00000030249	-	100	51.807
ENSXETG00000002690	-	54	45.662	ENSXETG00000031192	-	100	45.662
ENSXETG00000002690	-	76	45.333	ENSXETG00000027484	znf432	97	45.333
ENSXETG00000002690	-	63	35.025	ENSXETG00000001910	znf646	100	40.244
ENSXETG00000002690	-	72	42.188	ENSXETG00000001911	znf668	95	42.400
ENSXETG00000002690	-	54	42.262	ENSXETG00000006263	gfi1b	55	42.262
ENSXETG00000002690	-	61	48.908	ENSXETG00000033508	-	76	48.908
ENSXETG00000002690	-	69	51.012	ENSXETG00000030307	-	100	51.012
ENSXETG00000002690	-	89	49.798	ENSXETG00000006575	znf420	95	49.798
ENSXETG00000002690	-	54	47.685	ENSXETG00000026673	-	91	47.685
ENSXETG00000002690	-	54	48.879	ENSXETG00000030967	-	98	48.879
ENSXETG00000002690	-	58	50.000	ENSXETG00000010512	-	99	50.000
ENSXETG00000002690	-	65	51.528	ENSXETG00000016062	znf184	99	51.528
ENSXETG00000002690	-	56	36.283	ENSXETG00000033098	ZNF366	50	36.283
ENSXETG00000002690	-	56	41.743	ENSXETG00000013744	znf319	82	41.743
ENSXETG00000002690	-	54	54.825	ENSXETG00000013882	-	99	54.825
ENSXETG00000002690	-	59	48.971	ENSXETG00000002717	-	99	48.971
ENSXETG00000002690	-	56	35.341	ENSXETG00000002101	prdm5	73	35.341
ENSXETG00000002690	-	56	39.552	ENSXETG00000024006	snai2	54	39.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002690	-	54	40.092	ENSAPOG00000021496	-	50	40.092	Acanthochromis_polyacanthus
ENSXETG00000002690	-	53	43.038	ENSAPOG00000000128	-	56	43.038	Acanthochromis_polyacanthus
ENSXETG00000002690	-	66	40.994	ENSACIG00000016133	-	58	40.994	Amphilophus_citrinellus
ENSXETG00000002690	-	55	52.406	ENSAPEG00000011635	-	56	52.406	Amphiprion_percula
ENSXETG00000002690	-	55	40.488	ENSATEG00000022022	-	92	40.488	Anabas_testudineus
ENSXETG00000002690	-	54	42.211	ENSATEG00000024551	-	65	42.211	Anabas_testudineus
ENSXETG00000002690	-	59	52.105	ENSATEG00000011235	-	69	47.093	Anabas_testudineus
ENSXETG00000002690	-	59	35.841	ENSATEG00000015828	-	65	35.841	Anabas_testudineus
ENSXETG00000002690	-	54	51.701	ENSATEG00000011202	-	67	51.701	Anabas_testudineus
ENSXETG00000002690	-	68	42.963	ENSAMXG00000035090	-	58	42.963	Astyanax_mexicanus
ENSXETG00000002690	-	57	50.265	ENSCVAG00000003630	-	81	50.265	Cyprinodon_variegatus
ENSXETG00000002690	-	53	40.455	ENSCVAG00000004508	-	60	40.455	Cyprinodon_variegatus
ENSXETG00000002690	-	56	45.378	ENSHBUG00000011264	-	51	45.378	Haplochromis_burtoni
ENSXETG00000002690	-	61	43.299	ENSHBUG00000002878	-	58	43.299	Haplochromis_burtoni
ENSXETG00000002690	-	66	37.795	ENSHBUG00000000731	-	53	37.795	Haplochromis_burtoni
ENSXETG00000002690	-	62	54.118	ENSHCOG00000008205	-	83	54.118	Hippocampus_comes
ENSXETG00000002690	-	94	41.228	ENSIPUG00000024007	-	94	41.228	Ictalurus_punctatus
ENSXETG00000002690	-	78	40.659	ENSKMAG00000000520	-	74	40.659	Kryptolebias_marmoratus
ENSXETG00000002690	-	59	38.272	ENSKMAG00000019912	-	51	38.272	Kryptolebias_marmoratus
ENSXETG00000002690	-	55	43.304	ENSLBEG00000011006	-	51	43.304	Labrus_bergylta
ENSXETG00000002690	-	54	38.235	ENSLBEG00000014676	-	56	38.235	Labrus_bergylta
ENSXETG00000002690	-	58	51.795	ENSMAMG00000022152	-	51	51.795	Mastacembelus_armatus
ENSXETG00000002690	-	54	39.004	ENSMZEG00005004047	-	51	39.004	Maylandia_zebra
ENSXETG00000002690	-	59	44.053	ENSMALG00000014761	-	64	44.053	Monopterus_albus
ENSXETG00000002690	-	54	50.000	ENSNBRG00000004381	-	76	50.000	Neolamprologus_brichardi
ENSXETG00000002690	-	55	44.681	ENSNBRG00000024051	-	50	44.681	Neolamprologus_brichardi
ENSXETG00000002690	-	54	44.724	ENSORLG00000025719	-	55	44.724	Oryzias_latipes
ENSXETG00000002690	-	58	38.519	ENSORLG00020009554	-	86	39.015	Oryzias_latipes_hni
ENSXETG00000002690	-	61	34.649	ENSORLG00020005815	-	73	34.649	Oryzias_latipes_hni
ENSXETG00000002690	-	54	44.724	ENSORLG00015012599	-	55	44.724	Oryzias_latipes_hsok
ENSXETG00000002690	-	55	38.565	ENSOMEG00000015640	-	70	38.565	Oryzias_melastigma
ENSXETG00000002690	-	54	41.667	ENSPFOG00000012948	-	55	41.667	Poecilia_formosa
ENSXETG00000002690	-	74	44.970	ENSPLAG00000009651	-	92	44.970	Poecilia_latipinna
ENSXETG00000002690	-	77	46.552	ENSPMEG00000023113	-	66	46.552	Poecilia_mexicana
ENSXETG00000002690	-	65	48.980	ENSPREG00000004006	-	63	48.980	Poecilia_reticulata
ENSXETG00000002690	-	63	41.830	ENSPREG00000016270	-	77	42.358	Poecilia_reticulata
ENSXETG00000002690	-	61	46.188	ENSPNYG00000023882	-	85	46.188	Pundamilia_nyererei
ENSXETG00000002690	-	54	50.704	ENSPNYG00000019187	-	80	48.198	Pundamilia_nyererei
ENSXETG00000002690	-	54	51.955	ENSPNAG00000010317	-	87	51.955	Pygocentrus_nattereri
ENSXETG00000002690	-	55	40.952	ENSPNAG00000007754	-	51	39.130	Pygocentrus_nattereri
ENSXETG00000002690	-	54	51.327	ENSSLDG00000007568	-	72	51.327	Seriola_lalandi_dorsalis
ENSXETG00000002690	-	54	39.877	ENSSPAG00000010524	-	53	39.877	Stegastes_partitus
ENSXETG00000002690	-	52	46.734	ENSSPAG00000021950	-	68	44.954	Stegastes_partitus
ENSXETG00000002690	-	54	46.875	ENSXCOG00000018315	-	91	46.875	Xiphophorus_couchianus