EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002760 (Gene tree)
Gene ID: -
Gene Symbol: srbd1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 95304 bases
Position: chrGL172661.1:1134881-1230184
Accession: XB-GENE-6035351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006009	S1	PF00575.23	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006009	-	3063	-	ENSXETP00000006009	1020 (aa)	-	F7D0C2

Gene Model

Click here to download ENSXETG00000002760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002760	srbd1	100	53.003	ENSG00000068784	SRBD1	100	52.802	Homo_sapiens
ENSXETG00000002760	srbd1	98	46.065	ENSAPOG00000005103	si:ch211-117n7.8	98	46.065	Acanthochromis_polyacanthus
ENSXETG00000002760	srbd1	100	53.043	ENSAMEG00000005993	SRBD1	100	52.754	Ailuropoda_melanoleuca
ENSXETG00000002760	srbd1	96	44.402	ENSACIG00000009875	si:ch211-117n7.8	99	45.043	Amphilophus_citrinellus
ENSXETG00000002760	srbd1	98	46.139	ENSAOCG00000024718	si:ch211-117n7.8	98	46.139	Amphiprion_ocellaris
ENSXETG00000002760	srbd1	96	46.387	ENSAPEG00000002645	si:ch211-117n7.8	99	46.078	Amphiprion_percula
ENSXETG00000002760	srbd1	98	45.663	ENSATEG00000010844	si:ch211-117n7.8	98	45.821	Anabas_testudineus
ENSXETG00000002760	srbd1	100	53.169	ENSAPLG00000006313	SRBD1	100	53.252	Anas_platyrhynchos
ENSXETG00000002760	srbd1	100	52.526	ENSANAG00000025573	SRBD1	100	52.546	Aotus_nancymaae
ENSXETG00000002760	srbd1	98	45.146	ENSACLG00000024219	si:ch211-117n7.8	98	45.429	Astatotilapia_calliptera
ENSXETG00000002760	srbd1	98	46.435	ENSAMXG00000004294	SRBD1	98	47.206	Astyanax_mexicanus
ENSXETG00000002760	srbd1	100	51.393	ENSBTAG00000007508	SRBD1	97	51.396	Bos_taurus
ENSXETG00000002760	srbd1	100	53.014	ENSCJAG00000000727	SRBD1	100	52.834	Callithrix_jacchus
ENSXETG00000002760	srbd1	100	52.788	ENSCAFG00000002554	SRBD1	100	52.692	Canis_familiaris
ENSXETG00000002760	srbd1	100	50.048	ENSCAFG00020026284	SRBD1	99	60.000	Canis_lupus_dingo
ENSXETG00000002760	srbd1	100	51.156	ENSCHIG00000016535	SRBD1	98	51.823	Capra_hircus
ENSXETG00000002760	srbd1	100	52.818	ENSTSYG00000012797	SRBD1	100	52.727	Carlito_syrichta
ENSXETG00000002760	srbd1	100	53.043	ENSCPOG00000004773	SRBD1	100	52.718	Cavia_porcellus
ENSXETG00000002760	srbd1	100	52.930	ENSCCAG00000025589	SRBD1	100	52.930	Cebus_capucinus
ENSXETG00000002760	srbd1	100	53.026	ENSCATG00000039530	SRBD1	100	53.026	Cercocebus_atys
ENSXETG00000002760	srbd1	100	52.845	ENSCLAG00000008623	SRBD1	100	52.748	Chinchilla_lanigera
ENSXETG00000002760	srbd1	100	53.352	ENSCSAG00000013350	SRBD1	100	53.161	Chlorocebus_sabaeus
ENSXETG00000002760	srbd1	84	86.000	ENSCHOG00000003805	SRBD1	87	86.000	Choloepus_hoffmanni
ENSXETG00000002760	srbd1	95	55.612	ENSCPBG00000005677	SRBD1	100	54.440	Chrysemys_picta_bellii
ENSXETG00000002760	srbd1	80	34.420	ENSCING00000005950	-	99	33.981	Ciona_intestinalis
ENSXETG00000002760	srbd1	80	34.867	ENSCSAVG00000000861	-	99	34.867	Ciona_savignyi
ENSXETG00000002760	srbd1	99	53.173	ENSCANG00000016307	SRBD1	99	52.987	Colobus_angolensis_palliatus
ENSXETG00000002760	srbd1	100	52.069	ENSCGRG00001000513	Srbd1	100	51.538	Cricetulus_griseus_chok1gshd
ENSXETG00000002760	srbd1	100	52.069	ENSCGRG00000002283	Srbd1	100	51.538	Cricetulus_griseus_crigri
ENSXETG00000002760	srbd1	99	43.804	ENSCSEG00000000856	si:ch211-117n7.8	98	43.900	Cynoglossus_semilaevis
ENSXETG00000002760	srbd1	88	47.243	ENSCVAG00000020212	si:ch211-117n7.8	99	44.466	Cyprinodon_variegatus
ENSXETG00000002760	srbd1	100	52.046	ENSDNOG00000018686	SRBD1	100	51.859	Dasypus_novemcinctus
ENSXETG00000002760	srbd1	100	51.691	ENSDORG00000010468	Srbd1	100	51.691	Dipodomys_ordii
ENSXETG00000002760	srbd1	90	49.663	ENSETEG00000000739	SRBD1	92	49.497	Echinops_telfairi
ENSXETG00000002760	srbd1	74	39.309	ENSEBUG00000008902	si:ch211-117n7.8	96	39.382	Eptatretus_burgeri
ENSXETG00000002760	srbd1	100	49.809	ENSEASG00005003132	SRBD1	98	64.364	Equus_asinus_asinus
ENSXETG00000002760	srbd1	100	52.390	ENSECAG00000013865	SRBD1	98	52.004	Equus_caballus
ENSXETG00000002760	srbd1	95	49.252	ENSELUG00000012592	si:ch211-117n7.8	94	48.680	Esox_lucius
ENSXETG00000002760	srbd1	100	52.318	ENSFCAG00000005101	SRBD1	100	52.223	Felis_catus
ENSXETG00000002760	srbd1	88	56.022	ENSFALG00000012966	SRBD1	100	52.606	Ficedula_albicollis
ENSXETG00000002760	srbd1	98	52.668	ENSFDAG00000016670	SRBD1	99	52.071	Fukomys_damarensis
ENSXETG00000002760	srbd1	98	45.152	ENSFHEG00000019480	si:ch211-117n7.8	98	44.890	Fundulus_heteroclitus
ENSXETG00000002760	srbd1	96	53.346	ENSGALG00000009990	SRBD1	100	53.616	Gallus_gallus
ENSXETG00000002760	srbd1	98	45.946	ENSGAFG00000019664	si:ch211-117n7.8	98	46.339	Gambusia_affinis
ENSXETG00000002760	srbd1	64	48.054	ENSGACG00000010794	si:ch211-117n7.8	100	48.126	Gasterosteus_aculeatus
ENSXETG00000002760	srbd1	84	70.144	ENSGAGG00000006166	SRBD1	98	70.909	Gopherus_agassizii
ENSXETG00000002760	srbd1	98	53.967	ENSGGOG00000005910	SRBD1	99	53.673	Gorilla_gorilla
ENSXETG00000002760	srbd1	96	40.377	ENSHBUG00000013207	si:ch211-117n7.8	99	41.071	Haplochromis_burtoni
ENSXETG00000002760	srbd1	99	52.422	ENSHGLG00000018153	-	99	52.427	Heterocephalus_glaber_female
ENSXETG00000002760	srbd1	99	52.519	ENSHGLG00100015183	-	99	52.422	Heterocephalus_glaber_male
ENSXETG00000002760	srbd1	96	47.528	ENSIPUG00000009661	srbd1	98	46.432	Ictalurus_punctatus
ENSXETG00000002760	srbd1	100	52.372	ENSSTOG00000005898	SRBD1	100	52.372	Ictidomys_tridecemlineatus
ENSXETG00000002760	srbd1	100	50.289	ENSJJAG00000022244	Srbd1	100	50.583	Jaculus_jaculus
ENSXETG00000002760	srbd1	98	46.169	ENSKMAG00000003473	si:ch211-117n7.8	98	45.881	Kryptolebias_marmoratus
ENSXETG00000002760	srbd1	98	45.584	ENSLBEG00000027518	si:ch211-117n7.8	98	45.489	Labrus_bergylta
ENSXETG00000002760	srbd1	86	56.821	ENSLACG00000009790	SRBD1	99	56.821	Latimeria_chalumnae
ENSXETG00000002760	srbd1	96	49.601	ENSLOCG00000016360	si:ch211-117n7.8	99	48.853	Lepisosteus_oculatus
ENSXETG00000002760	srbd1	100	53.116	ENSMFAG00000042026	SRBD1	100	52.930	Macaca_fascicularis
ENSXETG00000002760	srbd1	100	53.116	ENSMMUG00000003490	SRBD1	100	52.930	Macaca_mulatta
ENSXETG00000002760	srbd1	100	51.965	ENSMNEG00000034701	SRBD1	100	51.777	Macaca_nemestrina
ENSXETG00000002760	srbd1	100	53.020	ENSMLEG00000000745	SRBD1	100	52.834	Mandrillus_leucophaeus
ENSXETG00000002760	srbd1	100	44.673	ENSMAMG00000021921	si:ch211-117n7.8	99	45.532	Mastacembelus_armatus
ENSXETG00000002760	srbd1	98	45.146	ENSMZEG00005027369	si:ch211-117n7.8	98	45.429	Maylandia_zebra
ENSXETG00000002760	srbd1	80	54.524	ENSMGAG00000010273	SRBD1	99	54.524	Meleagris_gallopavo
ENSXETG00000002760	srbd1	80	58.293	ENSMAUG00000013916	Srbd1	95	57.561	Mesocricetus_auratus
ENSXETG00000002760	srbd1	100	53.110	ENSMICG00000007835	SRBD1	100	53.110	Microcebus_murinus
ENSXETG00000002760	srbd1	100	52.478	ENSMOCG00000018716	Srbd1	100	51.398	Microtus_ochrogaster
ENSXETG00000002760	srbd1	96	44.608	ENSMMOG00000007507	si:ch211-117n7.8	99	44.218	Mola_mola
ENSXETG00000002760	srbd1	98	44.910	ENSMALG00000001562	si:ch211-117n7.8	98	45.290	Monopterus_albus
ENSXETG00000002760	srbd1	100	51.691	MGP_CAROLIEiJ_G0021934	Srbd1	99	62.215	Mus_caroli
ENSXETG00000002760	srbd1	100	51.638	ENSMUSG00000024135	Srbd1	96	66.176	Mus_musculus
ENSXETG00000002760	srbd1	100	50.920	MGP_PahariEiJ_G0020924	Srbd1	100	49.616	Mus_pahari
ENSXETG00000002760	srbd1	100	51.884	MGP_SPRETEiJ_G0022850	Srbd1	100	50.963	Mus_spretus
ENSXETG00000002760	srbd1	100	51.579	ENSMLUG00000007039	SRBD1	100	51.579	Myotis_lucifugus
ENSXETG00000002760	srbd1	100	52.124	ENSNGAG00000011893	Srbd1	100	51.616	Nannospalax_galili
ENSXETG00000002760	srbd1	98	43.732	ENSNBRG00000012873	si:ch211-117n7.8	99	44.412	Neolamprologus_brichardi
ENSXETG00000002760	srbd1	100	52.997	ENSNLEG00000016877	SRBD1	100	52.958	Nomascus_leucogenys
ENSXETG00000002760	srbd1	100	53.372	ENSODEG00000012095	SRBD1	100	53.146	Octodon_degus
ENSXETG00000002760	srbd1	98	45.009	ENSONIG00000000945	si:ch211-117n7.8	99	49.083	Oreochromis_niloticus
ENSXETG00000002760	srbd1	100	52.408	ENSOCUG00000015385	SRBD1	100	52.408	Oryctolagus_cuniculus
ENSXETG00000002760	srbd1	98	42.410	ENSORLG00000004427	si:ch211-117n7.8	98	42.762	Oryzias_latipes
ENSXETG00000002760	srbd1	98	44.834	ENSORLG00020012792	si:ch211-117n7.8	98	45.118	Oryzias_latipes_hni
ENSXETG00000002760	srbd1	98	44.759	ENSORLG00015018598	si:ch211-117n7.8	98	45.118	Oryzias_latipes_hsok
ENSXETG00000002760	srbd1	98	44.828	ENSOMEG00000012229	si:ch211-117n7.8	97	52.281	Oryzias_melastigma
ENSXETG00000002760	srbd1	100	49.084	ENSOGAG00000001076	SRBD1	100	49.377	Otolemur_garnettii
ENSXETG00000002760	srbd1	100	50.577	ENSOARG00000005958	SRBD1	100	51.149	Ovis_aries
ENSXETG00000002760	srbd1	100	52.924	ENSPPAG00000038442	SRBD1	100	52.991	Pan_paniscus
ENSXETG00000002760	srbd1	100	52.367	ENSPPRG00000003449	SRBD1	100	52.273	Panthera_pardus
ENSXETG00000002760	srbd1	100	52.637	ENSPTIG00000012495	SRBD1	100	52.637	Panthera_tigris_altaica
ENSXETG00000002760	srbd1	100	52.733	ENSPTRG00000011889	SRBD1	100	52.802	Pan_troglodytes
ENSXETG00000002760	srbd1	100	53.308	ENSPANG00000008063	SRBD1	100	53.122	Papio_anubis
ENSXETG00000002760	srbd1	98	47.520	ENSPKIG00000021973	si:ch211-117n7.8	98	46.961	Paramormyrops_kingsleyae
ENSXETG00000002760	srbd1	100	54.415	ENSPSIG00000008992	SRBD1	100	54.067	Pelodiscus_sinensis
ENSXETG00000002760	srbd1	97	45.034	ENSPMGG00000013348	si:ch211-117n7.8	98	45.098	Periophthalmus_magnuspinnatus
ENSXETG00000002760	srbd1	100	52.682	ENSPEMG00000020684	Srbd1	100	51.965	Peromyscus_maniculatus_bairdii
ENSXETG00000002760	srbd1	99	45.985	ENSPFOG00000010650	si:ch211-117n7.8	98	45.793	Poecilia_formosa
ENSXETG00000002760	srbd1	99	46.065	ENSPLAG00000002141	si:ch211-117n7.8	98	45.873	Poecilia_latipinna
ENSXETG00000002760	srbd1	99	45.985	ENSPMEG00000018537	si:ch211-117n7.8	98	45.793	Poecilia_mexicana
ENSXETG00000002760	srbd1	98	45.419	ENSPREG00000003258	si:ch211-117n7.8	99	45.224	Poecilia_reticulata
ENSXETG00000002760	srbd1	100	52.186	ENSPPYG00000012444	SRBD1	99	52.239	Pongo_abelii
ENSXETG00000002760	srbd1	77	51.139	ENSPCAG00000005629	SRBD1	80	50.884	Procavia_capensis
ENSXETG00000002760	srbd1	100	45.928	ENSPCOG00000017669	SRBD1	100	45.742	Propithecus_coquereli
ENSXETG00000002760	srbd1	94	63.259	ENSPVAG00000001782	SRBD1	97	61.981	Pteropus_vampyrus
ENSXETG00000002760	srbd1	96	44.225	ENSPNYG00000000508	si:ch211-117n7.8	99	44.916	Pundamilia_nyererei
ENSXETG00000002760	srbd1	94	49.080	ENSPNAG00000013492	SRBD1	98	48.249	Pygocentrus_nattereri
ENSXETG00000002760	srbd1	97	51.506	ENSRNOG00000014720	Srbd1	83	56.895	Rattus_norvegicus
ENSXETG00000002760	srbd1	99	53.071	ENSRBIG00000033486	SRBD1	99	52.987	Rhinopithecus_bieti
ENSXETG00000002760	srbd1	99	53.071	ENSRROG00000041599	SRBD1	99	52.987	Rhinopithecus_roxellana
ENSXETG00000002760	srbd1	100	52.975	ENSSBOG00000024982	SRBD1	100	52.642	Saimiri_boliviensis_boliviensis
ENSXETG00000002760	srbd1	97	47.100	ENSSFOG00015001128	si:ch211-117n7.8	99	47.065	Scleropages_formosus
ENSXETG00000002760	srbd1	99	44.290	ENSSMAG00000018256	si:ch211-117n7.8	99	43.680	Scophthalmus_maximus
ENSXETG00000002760	srbd1	95	45.837	ENSSLDG00000023189	si:ch211-117n7.8	99	45.204	Seriola_lalandi_dorsalis
ENSXETG00000002760	srbd1	100	47.665	ENSSARG00000009740	SRBD1	100	47.287	Sorex_araneus
ENSXETG00000002760	srbd1	90	55.914	ENSSPUG00000010475	SRBD1	100	53.908	Sphenodon_punctatus
ENSXETG00000002760	srbd1	96	45.962	ENSSPAG00000008092	-	99	45.149	Stegastes_partitus
ENSXETG00000002760	srbd1	100	51.862	ENSSSCG00000008445	SRBD1	98	57.258	Sus_scrofa
ENSXETG00000002760	srbd1	84	58.161	ENSTGUG00000003878	SRBD1	99	57.883	Taeniopygia_guttata
ENSXETG00000002760	srbd1	99	44.249	ENSTRUG00000007080	si:ch211-117n7.8	96	46.746	Takifugu_rubripes
ENSXETG00000002760	srbd1	98	44.359	ENSTNIG00000007464	si:ch211-117n7.8	98	43.679	Tetraodon_nigroviridis
ENSXETG00000002760	srbd1	73	76.842	ENSTBEG00000004556	SRBD1	75	76.842	Tupaia_belangeri
ENSXETG00000002760	srbd1	86	66.154	ENSTTRG00000011871	SRBD1	87	66.848	Tursiops_truncatus
ENSXETG00000002760	srbd1	100	53.513	ENSUAMG00000008126	SRBD1	98	66.192	Ursus_americanus
ENSXETG00000002760	srbd1	100	52.743	ENSUMAG00000012902	SRBD1	98	52.454	Ursus_maritimus
ENSXETG00000002760	srbd1	86	56.229	ENSVPAG00000006825	SRBD1	93	56.229	Vicugna_pacos
ENSXETG00000002760	srbd1	100	52.408	ENSVVUG00000005389	SRBD1	100	52.839	Vulpes_vulpes
ENSXETG00000002760	srbd1	98	45.977	ENSXMAG00000016861	si:ch211-117n7.8	98	45.977	Xiphophorus_maculatus