EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002782 (Gene tree)
Gene ID: -
Gene Symbol: nop53
Alias: -
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 12220 bases
Position: chrGL173097.1:35277-47496
Accession: XB-GENE-853827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006045	Nop53	PF07767.11	1e-90	1	1
ENSXETP00000059323	Nop53	PF07767.11	1.1e-82	1	2
ENSXETP00000059323	Nop53	PF07767.11	1.1e-82	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000062361	-	1908	-	ENSXETP00000059323	582 (aa)	-	F6Z5M4
ENSXETT00000006045	-	1653	XM_002939243	ENSXETP00000006045	448 (aa)	XP_002939289	F7CTZ8

Gene Model

Click here to download ENSXETG00000002782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002782	nop53	99	50.107	ENSG00000105373	NOP53	100	75.000	Homo_sapiens
ENSXETG00000002782	nop53	91	48.931	ENSAPOG00000006446	nop53	94	58.929	Acanthochromis_polyacanthus
ENSXETG00000002782	nop53	99	46.939	ENSAMEG00000015214	NOP53	96	59.016	Ailuropoda_melanoleuca
ENSXETG00000002782	nop53	75	46.746	ENSACIG00000002467	nop53	90	60.714	Amphilophus_citrinellus
ENSXETG00000002782	nop53	91	47.381	ENSAOCG00000007002	nop53	98	47.921	Amphiprion_ocellaris
ENSXETG00000002782	nop53	91	47.506	ENSAPEG00000024564	nop53	98	48.035	Amphiprion_percula
ENSXETG00000002782	nop53	87	48.894	ENSATEG00000021860	nop53	98	48.864	Anabas_testudineus
ENSXETG00000002782	nop53	63	56.463	ENSACAG00000011362	-	96	64.167	Anolis_carolinensis
ENSXETG00000002782	nop53	93	48.276	ENSANAG00000007933	NOP53	88	67.257	Aotus_nancymaae
ENSXETG00000002782	nop53	99	48.596	ENSACLG00000011832	nop53	94	58.036	Astatotilapia_calliptera
ENSXETG00000002782	nop53	90	48.565	ENSAMXG00000014883	nop53	87	58.559	Astyanax_mexicanus
ENSXETG00000002782	nop53	90	51.972	ENSBTAG00000021192	NOP53	86	68.696	Bos_taurus
ENSXETG00000002782	nop53	99	51.386	ENSCJAG00000011385	NOP53	93	66.957	Callithrix_jacchus
ENSXETG00000002782	nop53	99	49.788	ENSCAFG00000004080	NOP53	95	67.257	Canis_familiaris
ENSXETG00000002782	nop53	89	51.773	ENSCHIG00000009393	NOP53	94	69.027	Capra_hircus
ENSXETG00000002782	nop53	98	45.690	ENSTSYG00000036631	NOP53	91	74.627	Carlito_syrichta
ENSXETG00000002782	nop53	84	51.269	ENSCAPG00000013148	NOP53	95	66.372	Cavia_aperea
ENSXETG00000002782	nop53	99	49.045	ENSCPOG00000015665	NOP53	95	65.487	Cavia_porcellus
ENSXETG00000002782	nop53	99	51.183	ENSCCAG00000025477	NOP53	96	66.087	Cebus_capucinus
ENSXETG00000002782	nop53	99	50.959	ENSCATG00000032842	NOP53	95	66.957	Cercocebus_atys
ENSXETG00000002782	nop53	99	49.272	ENSCLAG00000001860	NOP53	95	66.087	Chinchilla_lanigera
ENSXETG00000002782	nop53	99	49.679	ENSCSAG00000002928	NOP53	95	66.087	Chlorocebus_sabaeus
ENSXETG00000002782	nop53	86	57.683	ENSCPBG00000009047	NOP53	90	66.087	Chrysemys_picta_bellii
ENSXETG00000002782	nop53	90	33.647	ENSCING00000021395	-	93	43.966	Ciona_intestinalis
ENSXETG00000002782	nop53	90	34.198	ENSCSAVG00000006009	-	79	57.303	Ciona_savignyi
ENSXETG00000002782	nop53	99	45.494	ENSCANG00000039648	NOP53	94	67.257	Colobus_angolensis_palliatus
ENSXETG00000002782	nop53	99	50.743	ENSCGRG00001019033	Nop53	93	68.142	Cricetulus_griseus_chok1gshd
ENSXETG00000002782	nop53	99	48.148	ENSCSEG00000014834	nop53	94	57.143	Cynoglossus_semilaevis
ENSXETG00000002782	nop53	91	49.061	ENSCVAG00000005940	nop53	87	60.714	Cyprinodon_variegatus
ENSXETG00000002782	nop53	90	51.683	ENSDARG00000100452	nop53	99	53.631	Danio_rerio
ENSXETG00000002782	nop53	100	49.145	ENSDNOG00000005165	NOP53	86	66.087	Dasypus_novemcinctus
ENSXETG00000002782	nop53	58	48.175	ENSDORG00000016339	-	94	48.905	Dipodomys_ordii
ENSXETG00000002782	nop53	62	30.702	FBgn0030061	CG1785	68	30.702	Drosophila_melanogaster
ENSXETG00000002782	nop53	98	44.719	ENSEBUG00000012747	nop53	86	53.390	Eptatretus_burgeri
ENSXETG00000002782	nop53	99	49.893	ENSEASG00005004345	NOP53	89	66.087	Equus_asinus_asinus
ENSXETG00000002782	nop53	99	49.576	ENSECAG00000026850	NOP53	89	66.957	Equus_caballus
ENSXETG00000002782	nop53	68	78.462	ENSEEUG00000005287	NOP53	86	78.462	Erinaceus_europaeus
ENSXETG00000002782	nop53	91	50.952	ENSELUG00000001525	nop53	88	63.158	Esox_lucius
ENSXETG00000002782	nop53	99	49.787	ENSFCAG00000010861	NOP53	95	67.826	Felis_catus
ENSXETG00000002782	nop53	98	44.027	ENSFDAG00000010478	NOP53	90	73.239	Fukomys_damarensis
ENSXETG00000002782	nop53	91	50.118	ENSFHEG00000017763	nop53	84	61.607	Fundulus_heteroclitus
ENSXETG00000002782	nop53	91	45.854	ENSGMOG00000014299	nop53	88	55.833	Gadus_morhua
ENSXETG00000002782	nop53	99	50.533	ENSGALG00000039473	NOP53	75	60.870	Gallus_gallus
ENSXETG00000002782	nop53	99	48.817	ENSGAFG00000013301	nop53	93	63.393	Gambusia_affinis
ENSXETG00000002782	nop53	91	48.086	ENSGACG00000005766	nop53	86	58.036	Gasterosteus_aculeatus
ENSXETG00000002782	nop53	99	48.678	ENSGGOG00000005462	NOP53	96	67.257	Gorilla_gorilla
ENSXETG00000002782	nop53	89	48.775	ENSGGOG00000024728	-	75	62.609	Gorilla_gorilla
ENSXETG00000002782	nop53	99	48.596	ENSHBUG00000023625	nop53	94	58.036	Haplochromis_burtoni
ENSXETG00000002782	nop53	99	47.257	ENSHGLG00000018240	NOP53	95	65.487	Heterocephalus_glaber_female
ENSXETG00000002782	nop53	77	65.217	ENSHGLG00100015613	NOP53	96	65.217	Heterocephalus_glaber_male
ENSXETG00000002782	nop53	91	47.489	ENSHCOG00000017133	nop53	88	57.983	Hippocampus_comes
ENSXETG00000002782	nop53	90	52.785	ENSIPUG00000008154	nop53	83	61.261	Ictalurus_punctatus
ENSXETG00000002782	nop53	99	49.784	ENSSTOG00000022092	NOP53	93	66.957	Ictidomys_tridecemlineatus
ENSXETG00000002782	nop53	99	48.837	ENSJJAG00000007854	Nop53	96	68.468	Jaculus_jaculus
ENSXETG00000002782	nop53	86	46.384	ENSKMAG00000020756	nop53	93	53.763	Kryptolebias_marmoratus
ENSXETG00000002782	nop53	91	51.643	ENSLBEG00000011432	nop53	86	61.062	Labrus_bergylta
ENSXETG00000002782	nop53	86	57.975	ENSLACG00000018320	NOP53	95	63.717	Latimeria_chalumnae
ENSXETG00000002782	nop53	99	49.889	ENSLOCG00000014178	nop53	94	56.522	Lepisosteus_oculatus
ENSXETG00000002782	nop53	99	50.107	ENSMFAG00000045103	NOP53	95	66.957	Macaca_fascicularis
ENSXETG00000002782	nop53	99	50.107	ENSMMUG00000013348	NOP53	100	75.000	Macaca_mulatta
ENSXETG00000002782	nop53	99	50.107	ENSMNEG00000042540	NOP53	91	66.957	Macaca_nemestrina
ENSXETG00000002782	nop53	99	45.238	ENSMLEG00000032475	NOP53	81	67.257	Mandrillus_leucophaeus
ENSXETG00000002782	nop53	91	49.884	ENSMAMG00000012652	nop53	87	62.500	Mastacembelus_armatus
ENSXETG00000002782	nop53	99	47.545	ENSMZEG00005005033	nop53	93	58.036	Maylandia_zebra
ENSXETG00000002782	nop53	99	51.812	ENSMAUG00000012617	Nop53	93	69.027	Mesocricetus_auratus
ENSXETG00000002782	nop53	92	50.459	ENSMICG00000005580	NOP53	88	64.602	Microcebus_murinus
ENSXETG00000002782	nop53	99	50.749	ENSMOCG00000008367	Nop53	93	70.270	Microtus_ochrogaster
ENSXETG00000002782	nop53	91	51.090	ENSMMOG00000006515	nop53	86	59.821	Mola_mola
ENSXETG00000002782	nop53	99	51.448	ENSMODG00000008721	NOP53	87	63.248	Monodelphis_domestica
ENSXETG00000002782	nop53	91	50.239	ENSMALG00000020350	nop53	82	58.929	Monopterus_albus
ENSXETG00000002782	nop53	99	49.156	MGP_CAROLIEiJ_G0029218	Nop53	93	66.372	Mus_caroli
ENSXETG00000002782	nop53	99	49.789	ENSMUSG00000041560	Nop53	93	66.372	Mus_musculus
ENSXETG00000002782	nop53	87	50.485	MGP_PahariEiJ_G0021074	-	91	66.372	Mus_pahari
ENSXETG00000002782	nop53	99	49.367	MGP_SPRETEiJ_G0030298	Nop53	93	66.372	Mus_spretus
ENSXETG00000002782	nop53	99	50.317	ENSMPUG00000004456	NOP53	96	67.826	Mustela_putorius_furo
ENSXETG00000002782	nop53	56	61.194	ENSMLUG00000027066	-	100	53.358	Myotis_lucifugus
ENSXETG00000002782	nop53	99	50.000	ENSNGAG00000019894	Nop53	98	69.027	Nannospalax_galili
ENSXETG00000002782	nop53	98	42.793	ENSNBRG00000002057	nop53	87	51.064	Neolamprologus_brichardi
ENSXETG00000002782	nop53	99	49.687	ENSNLEG00000003143	NOP53	96	66.957	Nomascus_leucogenys
ENSXETG00000002782	nop53	72	72.881	ENSNLEG00000028326	-	77	60.674	Nomascus_leucogenys
ENSXETG00000002782	nop53	79	45.352	ENSMEUG00000002525	-	99	45.352	Notamacropus_eugenii
ENSXETG00000002782	nop53	98	48.817	ENSODEG00000006707	NOP53	93	64.602	Octodon_degus
ENSXETG00000002782	nop53	99	48.707	ENSONIG00000016624	nop53	94	58.036	Oreochromis_niloticus
ENSXETG00000002782	nop53	99	48.430	ENSORLG00000008659	nop53	94	62.931	Oryzias_latipes
ENSXETG00000002782	nop53	99	45.270	ENSORLG00020019916	nop53	91	62.069	Oryzias_latipes_hni
ENSXETG00000002782	nop53	99	48.796	ENSORLG00015001315	nop53	94	61.207	Oryzias_latipes_hsok
ENSXETG00000002782	nop53	99	47.253	ENSOMEG00000018244	nop53	94	58.929	Oryzias_melastigma
ENSXETG00000002782	nop53	70	76.119	ENSOGAG00000024300	NOP53	80	76.119	Otolemur_garnettii
ENSXETG00000002782	nop53	88	39.110	ENSOARG00000011414	NOP53	87	39.110	Ovis_aries
ENSXETG00000002782	nop53	68	78.667	ENSPPAG00000032995	-	97	68.317	Pan_paniscus
ENSXETG00000002782	nop53	99	48.822	ENSPPAG00000002927	-	96	60.870	Pan_paniscus
ENSXETG00000002782	nop53	99	43.871	ENSPPAG00000029337	-	74	60.360	Pan_paniscus
ENSXETG00000002782	nop53	99	49.787	ENSPPRG00000008954	NOP53	95	67.826	Panthera_pardus
ENSXETG00000002782	nop53	99	50.535	ENSPTRG00000011215	NOP53	96	67.257	Pan_troglodytes
ENSXETG00000002782	nop53	99	43.656	ENSPTRG00000052493	-	87	46.602	Pan_troglodytes
ENSXETG00000002782	nop53	99	47.516	ENSPTRG00000043520	-	96	67.257	Pan_troglodytes
ENSXETG00000002782	nop53	99	49.893	ENSPANG00000002964	NOP53	96	66.957	Papio_anubis
ENSXETG00000002782	nop53	99	48.894	ENSPKIG00000000127	nop53	86	59.821	Paramormyrops_kingsleyae
ENSXETG00000002782	nop53	91	49.048	ENSPMGG00000021579	nop53	87	58.036	Periophthalmus_magnuspinnatus
ENSXETG00000002782	nop53	99	50.212	ENSPEMG00000006856	Nop53	93	69.027	Peromyscus_maniculatus_bairdii
ENSXETG00000002782	nop53	50	42.562	ENSPMAG00000001501	-	90	45.565	Petromyzon_marinus
ENSXETG00000002782	nop53	99	51.193	ENSPCIG00000016718	NOP53	96	62.609	Phascolarctos_cinereus
ENSXETG00000002782	nop53	91	48.478	ENSPFOG00000002839	nop53	87	63.393	Poecilia_formosa
ENSXETG00000002782	nop53	91	48.712	ENSPLAG00000006675	nop53	86	63.393	Poecilia_latipinna
ENSXETG00000002782	nop53	56	49.064	ENSPLAG00000009285	-	76	48.193	Poecilia_latipinna
ENSXETG00000002782	nop53	99	48.812	ENSPMEG00000009589	nop53	94	63.393	Poecilia_mexicana
ENSXETG00000002782	nop53	56	48.699	ENSPMEG00000006978	nop53	76	47.809	Poecilia_mexicana
ENSXETG00000002782	nop53	91	45.542	ENSPREG00000008711	nop53	93	63.393	Poecilia_reticulata
ENSXETG00000002782	nop53	99	46.467	ENSPPYG00000010181	NOP53	90	75.362	Pongo_abelii
ENSXETG00000002782	nop53	99	47.771	ENSPCAG00000007692	NOP53	95	66.957	Procavia_capensis
ENSXETG00000002782	nop53	84	66.087	ENSPCOG00000016124	NOP53	89	66.087	Propithecus_coquereli
ENSXETG00000002782	nop53	81	53.053	ENSPVAG00000014671	NOP53	77	67.257	Pteropus_vampyrus
ENSXETG00000002782	nop53	99	48.812	ENSPNYG00000001341	nop53	94	58.036	Pundamilia_nyererei
ENSXETG00000002782	nop53	90	50.483	ENSPNAG00000012520	nop53	86	58.559	Pygocentrus_nattereri
ENSXETG00000002782	nop53	99	51.483	ENSRNOG00000013023	Nop53	93	69.912	Rattus_norvegicus
ENSXETG00000002782	nop53	99	49.892	ENSRBIG00000036427	NOP53	94	66.372	Rhinopithecus_bieti
ENSXETG00000002782	nop53	99	50.108	ENSRROG00000042298	NOP53	94	67.568	Rhinopithecus_roxellana
ENSXETG00000002782	nop53	99	51.836	ENSSBOG00000033115	NOP53	94	66.957	Saimiri_boliviensis_boliviensis
ENSXETG00000002782	nop53	86	54.569	ENSSHAG00000002239	NOP53	96	63.248	Sarcophilus_harrisii
ENSXETG00000002782	nop53	99	50.664	ENSSFOG00015007062	gltscr2	94	64.035	Scleropages_formosus
ENSXETG00000002782	nop53	91	48.592	ENSSMAG00000000212	nop53	87	57.143	Scophthalmus_maximus
ENSXETG00000002782	nop53	91	48.926	ENSSDUG00000010575	nop53	88	57.983	Seriola_dumerili
ENSXETG00000002782	nop53	91	49.633	ENSSLDG00000000140	nop53	85	57.983	Seriola_lalandi_dorsalis
ENSXETG00000002782	nop53	75	48.968	ENSSARG00000014109	NOP53	68	61.947	Sorex_araneus
ENSXETG00000002782	nop53	98	44.035	ENSSPUG00000004420	NOP53	85	63.025	Sphenodon_punctatus
ENSXETG00000002782	nop53	91	48.585	ENSSPAG00000000318	nop53	87	58.036	Stegastes_partitus
ENSXETG00000002782	nop53	99	48.922	ENSSSCG00000022774	NOP53	95	68.142	Sus_scrofa
ENSXETG00000002782	nop53	91	49.412	ENSTRUG00000004944	nop53	86	58.036	Takifugu_rubripes
ENSXETG00000002782	nop53	80	61.111	ENSTBEG00000008708	NOP53	65	64.602	Tupaia_belangeri
ENSXETG00000002782	nop53	99	50.105	ENSTTRG00000011831	NOP53	95	66.087	Tursiops_truncatus
ENSXETG00000002782	nop53	99	46.610	ENSUAMG00000028254	NOP53	95	61.062	Ursus_americanus
ENSXETG00000002782	nop53	78	44.562	ENSVVUG00000023365	NOP53	77	44.531	Vulpes_vulpes
ENSXETG00000002782	nop53	99	48.140	ENSXCOG00000004436	nop53	94	63.478	Xiphophorus_couchianus
ENSXETG00000002782	nop53	91	49.409	ENSXMAG00000002589	nop53	94	63.478	Xiphophorus_maculatus