EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002842 (Gene tree)
Gene ID: -
Gene Symbol: alkbh6
Alias: -
Full Name: Xenopus tropicalis alkB homolog 6 (alkbh6)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 7360 bases
Position: chrGL173097.1:801540-808899
Accession: NM_001078753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006206	2OG-FeII_Oxy_2	PF13532.6	5.8e-14	1	1
ENSXETP00000062964	2OG-FeII_Oxy_2	PF13532.6	9.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006206	-	708	-	ENSXETP00000006206	236 (aa)	-	F7DD00
ENSXETT00000063720	-	976	-	ENSXETP00000062964	170 (aa)	-	Q0VFK1

Gene Model

Click here to download ENSXETG00000002842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002842	alkbh6	96	60.262	ENSG00000239382	ALKBH6	96	61.135	Homo_sapiens
ENSXETG00000002842	alkbh6	96	56.710	ENSAMEG00000000900	ALKBH6	96	56.710	Ailuropoda_melanoleuca
ENSXETG00000002842	alkbh6	99	59.524	ENSACIG00000006337	alkbh6	93	61.860	Amphilophus_citrinellus
ENSXETG00000002842	alkbh6	99	59.916	ENSAOCG00000023885	alkbh6	93	59.916	Amphiprion_ocellaris
ENSXETG00000002842	alkbh6	99	59.064	ENSAPEG00000003934	alkbh6	98	60.435	Amphiprion_percula
ENSXETG00000002842	alkbh6	99	57.310	ENSATEG00000008859	alkbh6	97	57.269	Anabas_testudineus
ENSXETG00000002842	alkbh6	96	60.262	ENSANAG00000034195	ALKBH6	86	60.699	Aotus_nancymaae
ENSXETG00000002842	alkbh6	99	58.333	ENSACLG00000001836	alkbh6	97	59.471	Astatotilapia_calliptera
ENSXETG00000002842	alkbh6	99	58.333	ENSAMXG00000033280	alkbh6	96	60.088	Astyanax_mexicanus
ENSXETG00000002842	alkbh6	96	60.606	ENSBTAG00000019678	ALKBH6	86	60.606	Bos_taurus
ENSXETG00000002842	alkbh6	95	41.718	WBGene00007202	B0564.2	94	40.708	Caenorhabditis_elegans
ENSXETG00000002842	alkbh6	96	59.740	ENSCJAG00000043322	ALKBH6	86	60.606	Callithrix_jacchus
ENSXETG00000002842	alkbh6	96	60.173	ENSCAFG00000006669	ALKBH6	86	60.173	Canis_familiaris
ENSXETG00000002842	alkbh6	99	54.913	ENSCAFG00020018151	ALKBH6	96	54.978	Canis_lupus_dingo
ENSXETG00000002842	alkbh6	96	60.173	ENSCHIG00000015494	ALKBH6	96	60.173	Capra_hircus
ENSXETG00000002842	alkbh6	99	55.814	ENSCAPG00000010410	ALKBH6	96	58.333	Cavia_aperea
ENSXETG00000002842	alkbh6	96	60.699	ENSCPOG00000035954	ALKBH6	96	61.039	Cavia_porcellus
ENSXETG00000002842	alkbh6	96	61.039	ENSCCAG00000028476	ALKBH6	86	61.472	Cebus_capucinus
ENSXETG00000002842	alkbh6	98	59.574	ENSCATG00000029769	ALKBH6	96	62.232	Cercocebus_atys
ENSXETG00000002842	alkbh6	96	61.572	ENSCLAG00000014273	ALKBH6	96	61.905	Chinchilla_lanigera
ENSXETG00000002842	alkbh6	96	61.135	ENSCSAG00000004282	ALKBH6	86	61.135	Chlorocebus_sabaeus
ENSXETG00000002842	alkbh6	92	69.863	ENSCPBG00000006841	ALKBH6	89	69.863	Chrysemys_picta_bellii
ENSXETG00000002842	alkbh6	58	56.618	ENSCING00000020875	-	90	56.618	Ciona_intestinalis
ENSXETG00000002842	alkbh6	98	42.222	ENSCSAVG00000006115	-	88	42.623	Ciona_savignyi
ENSXETG00000002842	alkbh6	96	55.895	ENSCANG00000029705	ALKBH6	86	57.082	Colobus_angolensis_palliatus
ENSXETG00000002842	alkbh6	96	60.944	ENSCGRG00001022841	Alkbh6	96	60.944	Cricetulus_griseus_chok1gshd
ENSXETG00000002842	alkbh6	99	57.738	ENSCSEG00000016413	alkbh6	95	57.522	Cynoglossus_semilaevis
ENSXETG00000002842	alkbh6	99	55.621	ENSCVAG00000004657	alkbh6	97	56.957	Cyprinodon_variegatus
ENSXETG00000002842	alkbh6	98	55.603	ENSDARG00000077253	alkbh6	98	55.603	Danio_rerio
ENSXETG00000002842	alkbh6	96	59.227	ENSDNOG00000033659	ALKBH6	96	60.173	Dasypus_novemcinctus
ENSXETG00000002842	alkbh6	98	43.787	FBgn0032259	CG6144	99	44.541	Drosophila_melanogaster
ENSXETG00000002842	alkbh6	55	71.538	ENSETEG00000004833	ALKBH6	76	71.538	Echinops_telfairi
ENSXETG00000002842	alkbh6	97	46.667	ENSEBUG00000002396	alkbh6	99	46.667	Eptatretus_burgeri
ENSXETG00000002842	alkbh6	96	61.304	ENSEASG00005001464	ALKBH6	94	61.304	Equus_asinus_asinus
ENSXETG00000002842	alkbh6	99	53.757	ENSEEUG00000002238	ALKBH6	88	49.345	Erinaceus_europaeus
ENSXETG00000002842	alkbh6	99	60.119	ENSELUG00000017352	alkbh6	97	59.825	Esox_lucius
ENSXETG00000002842	alkbh6	96	61.304	ENSFCAG00000006619	ALKBH6	94	61.304	Felis_catus
ENSXETG00000002842	alkbh6	96	60.944	ENSFDAG00000012270	ALKBH6	96	60.944	Fukomys_damarensis
ENSXETG00000002842	alkbh6	98	59.649	ENSGMOG00000020607	alkbh6	100	61.574	Gadus_morhua
ENSXETG00000002842	alkbh6	99	57.447	ENSGAFG00000010793	alkbh6	98	57.447	Gambusia_affinis
ENSXETG00000002842	alkbh6	98	60.355	ENSGACG00000002647	alkbh6	99	62.150	Gasterosteus_aculeatus
ENSXETG00000002842	alkbh6	100	66.279	ENSGAGG00000006766	ALKBH6	82	66.480	Gopherus_agassizii
ENSXETG00000002842	alkbh6	96	60.262	ENSGGOG00000037040	ALKBH6	96	61.135	Gorilla_gorilla
ENSXETG00000002842	alkbh6	99	57.738	ENSHBUG00000023541	alkbh6	97	59.292	Haplochromis_burtoni
ENSXETG00000002842	alkbh6	96	58.874	ENSHGLG00000008091	ALKBH6	96	60.173	Heterocephalus_glaber_female
ENSXETG00000002842	alkbh6	96	58.874	ENSHGLG00100012062	ALKBH6	96	60.173	Heterocephalus_glaber_male
ENSXETG00000002842	alkbh6	99	58.333	ENSHCOG00000000308	alkbh6	99	57.627	Hippocampus_comes
ENSXETG00000002842	alkbh6	99	58.333	ENSIPUG00000018672	alkbh6	96	58.772	Ictalurus_punctatus
ENSXETG00000002842	alkbh6	96	59.825	ENSSTOG00000009337	ALKBH6	96	60.173	Ictidomys_tridecemlineatus
ENSXETG00000002842	alkbh6	97	57.940	ENSJJAG00000019843	Alkbh6	97	58.798	Jaculus_jaculus
ENSXETG00000002842	alkbh6	99	58.333	ENSKMAG00000003959	alkbh6	98	58.590	Kryptolebias_marmoratus
ENSXETG00000002842	alkbh6	99	62.500	ENSLBEG00000028172	alkbh6	97	63.158	Labrus_bergylta
ENSXETG00000002842	alkbh6	99	60.116	ENSLACG00000002470	alkbh6	97	59.322	Latimeria_chalumnae
ENSXETG00000002842	alkbh6	99	60.000	ENSLOCG00000014771	alkbh6	98	60.000	Lepisosteus_oculatus
ENSXETG00000002842	alkbh6	96	62.232	ENSMFAG00000042361	ALKBH6	96	62.232	Macaca_fascicularis
ENSXETG00000002842	alkbh6	96	61.135	ENSMMUG00000019700	ALKBH6	96	62.232	Macaca_mulatta
ENSXETG00000002842	alkbh6	96	61.135	ENSMNEG00000032917	ALKBH6	96	62.232	Macaca_nemestrina
ENSXETG00000002842	alkbh6	99	59.524	ENSMAMG00000010698	alkbh6	97	59.389	Mastacembelus_armatus
ENSXETG00000002842	alkbh6	99	58.333	ENSMZEG00005014192	alkbh6	97	59.471	Maylandia_zebra
ENSXETG00000002842	alkbh6	96	61.702	ENSMAUG00000013258	Alkbh6	96	61.702	Mesocricetus_auratus
ENSXETG00000002842	alkbh6	96	61.472	ENSMICG00000033414	ALKBH6	96	61.472	Microcebus_murinus
ENSXETG00000002842	alkbh6	96	61.803	ENSMOCG00000008724	Alkbh6	96	61.803	Microtus_ochrogaster
ENSXETG00000002842	alkbh6	99	58.929	ENSMMOG00000019353	alkbh6	98	54.321	Mola_mola
ENSXETG00000002842	alkbh6	99	60.119	ENSMALG00000013511	alkbh6	97	58.952	Monopterus_albus
ENSXETG00000002842	alkbh6	99	60.119	ENSMALG00000003655	-	98	58.547	Monopterus_albus
ENSXETG00000002842	alkbh6	96	61.905	MGP_CAROLIEiJ_G0029512	Alkbh6	99	60.185	Mus_caroli
ENSXETG00000002842	alkbh6	96	61.905	ENSMUSG00000042831	Alkbh6	99	60.185	Mus_musculus
ENSXETG00000002842	alkbh6	96	61.472	MGP_PahariEiJ_G0012746	Alkbh6	99	59.722	Mus_pahari
ENSXETG00000002842	alkbh6	96	61.905	MGP_SPRETEiJ_G0030608	Alkbh6	99	60.185	Mus_spretus
ENSXETG00000002842	alkbh6	96	61.304	ENSMPUG00000005804	ALKBH6	77	61.304	Mustela_putorius_furo
ENSXETG00000002842	alkbh6	96	60.000	ENSMLUG00000030420	ALKBH6	96	60.000	Myotis_lucifugus
ENSXETG00000002842	alkbh6	96	60.606	ENSNGAG00000012659	Alkbh6	90	60.606	Nannospalax_galili
ENSXETG00000002842	alkbh6	99	58.333	ENSNBRG00000018188	alkbh6	97	59.471	Neolamprologus_brichardi
ENSXETG00000002842	alkbh6	96	60.699	ENSNLEG00000011624	ALKBH6	96	60.699	Nomascus_leucogenys
ENSXETG00000002842	alkbh6	99	57.647	ENSMEUG00000007262	ALKBH6	99	61.421	Notamacropus_eugenii
ENSXETG00000002842	alkbh6	96	61.905	ENSODEG00000015515	ALKBH6	96	61.905	Octodon_degus
ENSXETG00000002842	alkbh6	99	59.402	ENSONIG00000021156	alkbh6	98	59.402	Oreochromis_niloticus
ENSXETG00000002842	alkbh6	96	61.472	ENSOCUG00000017671	ALKBH6	96	61.472	Oryctolagus_cuniculus
ENSXETG00000002842	alkbh6	99	59.524	ENSORLG00000015103	alkbh6	92	61.927	Oryzias_latipes
ENSXETG00000002842	alkbh6	99	60.119	ENSORLG00020004747	alkbh6	87	61.304	Oryzias_latipes_hni
ENSXETG00000002842	alkbh6	53	67.200	ENSORLG00015006159	alkbh6	87	67.200	Oryzias_latipes_hsok
ENSXETG00000002842	alkbh6	99	60.684	ENSOMEG00000022075	alkbh6	98	60.684	Oryzias_melastigma
ENSXETG00000002842	alkbh6	96	59.389	ENSOGAG00000011490	ALKBH6	86	59.825	Otolemur_garnettii
ENSXETG00000002842	alkbh6	78	64.865	ENSOARG00000005191	ALKBH6	64	64.865	Ovis_aries
ENSXETG00000002842	alkbh6	96	60.262	ENSPPAG00000036802	ALKBH6	96	60.699	Pan_paniscus
ENSXETG00000002842	alkbh6	96	61.739	ENSPPRG00000011495	ALKBH6	85	61.739	Panthera_pardus
ENSXETG00000002842	alkbh6	96	60.262	ENSPTRG00000039251	ALKBH6	96	60.699	Pan_troglodytes
ENSXETG00000002842	alkbh6	96	60.699	ENSPANG00000012372	ALKBH6	86	62.232	Papio_anubis
ENSXETG00000002842	alkbh6	97	61.572	ENSPKIG00000015358	alkbh6	97	62.727	Paramormyrops_kingsleyae
ENSXETG00000002842	alkbh6	93	65.471	ENSPSIG00000012465	ALKBH6	80	65.471	Pelodiscus_sinensis
ENSXETG00000002842	alkbh6	99	56.548	ENSPMGG00000012259	alkbh6	95	57.965	Periophthalmus_magnuspinnatus
ENSXETG00000002842	alkbh6	96	61.803	ENSPEMG00000001920	Alkbh6	96	61.803	Peromyscus_maniculatus_bairdii
ENSXETG00000002842	alkbh6	98	47.458	ENSPMAG00000005422	alkbh6	92	52.838	Petromyzon_marinus
ENSXETG00000002842	alkbh6	99	57.738	ENSPFOG00000019931	alkbh6	84	57.265	Poecilia_formosa
ENSXETG00000002842	alkbh6	99	57.738	ENSPLAG00000001926	alkbh6	84	57.265	Poecilia_latipinna
ENSXETG00000002842	alkbh6	99	58.333	ENSPMEG00000022559	alkbh6	92	60.577	Poecilia_mexicana
ENSXETG00000002842	alkbh6	99	58.929	ENSPREG00000001145	alkbh6	95	59.556	Poecilia_reticulata
ENSXETG00000002842	alkbh6	96	61.135	ENSPPYG00000029809	ALKBH6	84	61.472	Pongo_abelii
ENSXETG00000002842	alkbh6	96	60.173	ENSPCAG00000018829	ALKBH6	85	60.606	Procavia_capensis
ENSXETG00000002842	alkbh6	96	60.173	ENSPCOG00000024098	ALKBH6	86	60.173	Propithecus_coquereli
ENSXETG00000002842	alkbh6	99	53.714	ENSPVAG00000024193	ALKBH6	74	59.406	Pteropus_vampyrus
ENSXETG00000002842	alkbh6	99	58.333	ENSPNYG00000011487	alkbh6	97	59.471	Pundamilia_nyererei
ENSXETG00000002842	alkbh6	98	60.086	ENSPNAG00000024220	alkbh6	98	60.086	Pygocentrus_nattereri
ENSXETG00000002842	alkbh6	96	61.039	ENSRNOG00000025216	LOC108348106	96	61.373	Rattus_norvegicus
ENSXETG00000002842	alkbh6	96	61.039	ENSRNOG00000047943	Alkbh6	96	61.373	Rattus_norvegicus
ENSXETG00000002842	alkbh6	96	60.699	ENSRBIG00000010440	ALKBH6	96	61.135	Rhinopithecus_bieti
ENSXETG00000002842	alkbh6	96	61.472	ENSSBOG00000027983	ALKBH6	86	61.472	Saimiri_boliviensis_boliviensis
ENSXETG00000002842	alkbh6	97	60.426	ENSSHAG00000010575	ALKBH6	95	60.426	Sarcophilus_harrisii
ENSXETG00000002842	alkbh6	99	58.929	ENSSFOG00015005576	alkbh6	99	61.818	Scleropages_formosus
ENSXETG00000002842	alkbh6	99	58.929	ENSSMAG00000016306	alkbh6	90	60.465	Scophthalmus_maximus
ENSXETG00000002842	alkbh6	99	57.895	ENSSDUG00000007406	alkbh6	97	57.826	Seriola_dumerili
ENSXETG00000002842	alkbh6	99	58.480	ENSSLDG00000015256	alkbh6	97	58.696	Seriola_lalandi_dorsalis
ENSXETG00000002842	alkbh6	99	58.480	ENSSLDG00000009873	-	98	57.806	Seriola_lalandi_dorsalis
ENSXETG00000002842	alkbh6	99	67.647	ENSSPUG00000011895	ALKBH6	94	67.568	Sphenodon_punctatus
ENSXETG00000002842	alkbh6	99	58.333	ENSSPAG00000000608	alkbh6	97	58.590	Stegastes_partitus
ENSXETG00000002842	alkbh6	96	59.825	ENSSSCG00000002910	ALKBH6	96	59.825	Sus_scrofa
ENSXETG00000002842	alkbh6	99	58.929	ENSTNIG00000002453	alkbh6	98	57.384	Tetraodon_nigroviridis
ENSXETG00000002842	alkbh6	96	60.944	ENSTTRG00000021443	ALKBH6	86	60.944	Tursiops_truncatus
ENSXETG00000002842	alkbh6	96	61.304	ENSUAMG00000020580	ALKBH6	87	61.304	Ursus_americanus
ENSXETG00000002842	alkbh6	96	60.606	ENSVVUG00000013636	ALKBH6	96	60.606	Vulpes_vulpes