EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002888 (Gene tree)
Gene ID: -
Gene Symbol: supt5h
Alias: -
Full Name: Xenopus tropicalis SPT5 homolog%2C DSIF elongation factor subunit (supt5h)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 23861 bases
Position: chrGL173025.1:293674-317534
Accession: NM_001130324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006329	KOW	PF00467.29	9.3e-31	1	1
ENSXETP00000061419	KOW	PF00467.29	9.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006329	-	3735	-	ENSXETP00000006329	1078 (aa)	-	F7EGJ0
ENSXETT00000063324	-	3762	-	ENSXETP00000061419	1087 (aa)	-	F7B4G3

Gene Model

Click here to download ENSXETG00000002888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002888	supt5h	99	89.843	ENSG00000196235	SUPT5H	100	95.833	Homo_sapiens
ENSXETG00000002888	supt5h	94	82.498	ENSAPOG00000012970	supt5h	99	80.073	Acanthochromis_polyacanthus
ENSXETG00000002888	supt5h	99	89.512	ENSAMEG00000008382	SUPT5H	99	89.420	Ailuropoda_melanoleuca
ENSXETG00000002888	supt5h	92	89.052	ENSACIG00000021245	supt5h	93	89.542	Amphilophus_citrinellus
ENSXETG00000002888	supt5h	94	87.611	ENSAOCG00000001136	supt5h	99	85.873	Amphiprion_ocellaris
ENSXETG00000002888	supt5h	94	83.579	ENSAPEG00000021060	supt5h	96	83.563	Amphiprion_percula
ENSXETG00000002888	supt5h	94	88.889	ENSATEG00000002626	supt5h	99	87.258	Anabas_testudineus
ENSXETG00000002888	supt5h	94	91.757	ENSACAG00000000375	SUPT5H	99	90.037	Anolis_carolinensis
ENSXETG00000002888	supt5h	99	89.566	ENSANAG00000033469	SUPT5H	99	89.474	Aotus_nancymaae
ENSXETG00000002888	supt5h	94	86.359	ENSACLG00000011374	supt5h	96	85.288	Astatotilapia_calliptera
ENSXETG00000002888	supt5h	94	89.314	ENSAMXG00000009128	supt5h	99	87.823	Astyanax_mexicanus
ENSXETG00000002888	supt5h	99	89.751	ENSBTAG00000010467	SUPT5H	99	89.658	Bos_taurus
ENSXETG00000002888	supt5h	89	39.257	WBGene00005015	spt-5	89	40.018	Caenorhabditis_elegans
ENSXETG00000002888	supt5h	99	89.144	ENSCJAG00000014182	SUPT5H	99	89.052	Callithrix_jacchus
ENSXETG00000002888	supt5h	99	89.328	ENSCAFG00000005469	SUPT5H	99	89.236	Canis_familiaris
ENSXETG00000002888	supt5h	97	88.826	ENSCAFG00020015732	SUPT5H	99	90.873	Canis_lupus_dingo
ENSXETG00000002888	supt5h	99	89.328	ENSCHIG00000023821	SUPT5H	99	89.236	Capra_hircus
ENSXETG00000002888	supt5h	97	90.228	ENSTSYG00000010636	SUPT5H	94	91.527	Carlito_syrichta
ENSXETG00000002888	supt5h	97	87.724	ENSCAPG00000008285	SUPT5H	99	87.666	Cavia_aperea
ENSXETG00000002888	supt5h	99	88.868	ENSCPOG00000011367	SUPT5H	99	88.960	Cavia_porcellus
ENSXETG00000002888	supt5h	99	89.566	ENSCCAG00000034052	SUPT5H	99	89.474	Cebus_capucinus
ENSXETG00000002888	supt5h	99	89.751	ENSCATG00000035589	SUPT5H	99	89.658	Cercocebus_atys
ENSXETG00000002888	supt5h	99	88.868	ENSCLAG00000013796	SUPT5H	99	88.960	Chinchilla_lanigera
ENSXETG00000002888	supt5h	99	89.420	ENSCSAG00000003826	SUPT5H	99	89.328	Chlorocebus_sabaeus
ENSXETG00000002888	supt5h	94	92.414	ENSCPBG00000018792	SUPT5H	100	91.889	Chrysemys_picta_bellii
ENSXETG00000002888	supt5h	94	58.122	ENSCING00000021624	-	94	59.762	Ciona_intestinalis
ENSXETG00000002888	supt5h	100	60.743	ENSCSAVG00000000030	-	99	58.573	Ciona_savignyi
ENSXETG00000002888	supt5h	99	89.751	ENSCANG00000043752	SUPT5H	99	89.658	Colobus_angolensis_palliatus
ENSXETG00000002888	supt5h	99	87.948	ENSCGRG00001012522	Supt5	99	87.856	Cricetulus_griseus_chok1gshd
ENSXETG00000002888	supt5h	94	90.490	ENSCGRG00000006779	Supt5	97	89.100	Cricetulus_griseus_crigri
ENSXETG00000002888	supt5h	71	69.141	ENSCSEG00000017151	-	96	67.342	Cynoglossus_semilaevis
ENSXETG00000002888	supt5h	94	81.774	ENSCSEG00000015699	supt5h	97	82.066	Cynoglossus_semilaevis
ENSXETG00000002888	supt5h	94	87.941	ENSCVAG00000007501	supt5h	95	87.007	Cyprinodon_variegatus
ENSXETG00000002888	supt5h	94	89.510	ENSDARG00000042724	supt5h	99	87.731	Danio_rerio
ENSXETG00000002888	supt5h	91	91.185	ENSDNOG00000033920	SUPT5H	100	88.667	Dasypus_novemcinctus
ENSXETG00000002888	supt5h	99	83.736	ENSDORG00000016582	Supt5	99	84.387	Dipodomys_ordii
ENSXETG00000002888	supt5h	94	53.405	FBgn0040273	Spt5	91	53.422	Drosophila_melanogaster
ENSXETG00000002888	supt5h	54	92.164	ENSETEG00000009497	-	53	92.164	Echinops_telfairi
ENSXETG00000002888	supt5h	90	74.407	ENSEBUG00000011892	supt5h	100	74.303	Eptatretus_burgeri
ENSXETG00000002888	supt5h	99	88.920	ENSEASG00005011861	SUPT5H	99	91.582	Equus_asinus_asinus
ENSXETG00000002888	supt5h	99	89.012	ENSECAG00000013309	SUPT5H	99	91.516	Equus_caballus
ENSXETG00000002888	supt5h	97	81.481	ENSEEUG00000012879	SUPT5H	99	81.256	Erinaceus_europaeus
ENSXETG00000002888	supt5h	99	87.465	ENSELUG00000011402	supt5h	99	87.420	Esox_lucius
ENSXETG00000002888	supt5h	99	89.658	ENSFCAG00000010744	SUPT5H	99	89.566	Felis_catus
ENSXETG00000002888	supt5h	99	88.592	ENSFDAG00000015803	SUPT5H	99	88.684	Fukomys_damarensis
ENSXETG00000002888	supt5h	94	86.713	ENSFHEG00000012497	supt5h	95	86.319	Fundulus_heteroclitus
ENSXETG00000002888	supt5h	99	73.010	ENSGMOG00000003422	supt5h	95	73.664	Gadus_morhua
ENSXETG00000002888	supt5h	98	79.720	ENSGACG00000004934	supt5h	95	81.818	Gasterosteus_aculeatus
ENSXETG00000002888	supt5h	92	91.423	ENSGAGG00000019112	SUPT5H	99	91.991	Gopherus_agassizii
ENSXETG00000002888	supt5h	99	89.843	ENSGGOG00000014425	SUPT5H	99	90.397	Gorilla_gorilla
ENSXETG00000002888	supt5h	94	89.030	ENSHBUG00000017144	supt5h	95	88.558	Haplochromis_burtoni
ENSXETG00000002888	supt5h	99	88.592	ENSHGLG00000018339	SUPT5H	99	88.701	Heterocephalus_glaber_female
ENSXETG00000002888	supt5h	99	87.856	ENSHGLG00100017126	SUPT5H	99	88.040	Heterocephalus_glaber_male
ENSXETG00000002888	supt5h	94	86.765	ENSHCOG00000004932	supt5h	94	87.059	Hippocampus_comes
ENSXETG00000002888	supt5h	94	89.764	ENSIPUG00000007308	supt5h	99	88.078	Ictalurus_punctatus
ENSXETG00000002888	supt5h	99	88.408	ENSSTOG00000026638	SUPT5H	99	88.316	Ictidomys_tridecemlineatus
ENSXETG00000002888	supt5h	99	88.132	ENSJJAG00000022374	Supt5	99	88.500	Jaculus_jaculus
ENSXETG00000002888	supt5h	94	85.616	ENSKMAG00000004401	supt5h	95	84.741	Kryptolebias_marmoratus
ENSXETG00000002888	supt5h	100	88.235	ENSLACG00000008663	SUPT5H	100	88.327	Latimeria_chalumnae
ENSXETG00000002888	supt5h	81	79.622	ENSLOCG00000014703	SUPT5H	89	90.948	Lepisosteus_oculatus
ENSXETG00000002888	supt5h	99	85.976	ENSLAFG00000027736	SUPT5H	99	85.793	Loxodonta_africana
ENSXETG00000002888	supt5h	99	89.751	ENSMFAG00000038707	SUPT5H	99	89.658	Macaca_fascicularis
ENSXETG00000002888	supt5h	99	89.751	ENSMMUG00000019372	SUPT5H	99	89.658	Macaca_mulatta
ENSXETG00000002888	supt5h	99	89.751	ENSMNEG00000041553	SUPT5H	99	89.658	Macaca_nemestrina
ENSXETG00000002888	supt5h	99	89.751	ENSMLEG00000036432	SUPT5H	99	89.658	Mandrillus_leucophaeus
ENSXETG00000002888	supt5h	94	88.802	ENSMAMG00000019715	supt5h	99	87.396	Mastacembelus_armatus
ENSXETG00000002888	supt5h	94	88.856	ENSMZEG00005024864	supt5h	95	88.388	Maylandia_zebra
ENSXETG00000002888	supt5h	99	90.564	ENSMGAG00000012449	SUPT5H	99	91.128	Meleagris_gallopavo
ENSXETG00000002888	supt5h	99	82.870	ENSMAUG00000009006	Supt5	99	84.958	Mesocricetus_auratus
ENSXETG00000002888	supt5h	99	89.381	ENSMICG00000006115	SUPT5H	99	89.381	Microcebus_murinus
ENSXETG00000002888	supt5h	94	90.490	ENSMOCG00000012211	Supt5	99	88.122	Microtus_ochrogaster
ENSXETG00000002888	supt5h	94	87.500	ENSMMOG00000009770	supt5h	98	86.044	Mola_mola
ENSXETG00000002888	supt5h	94	84.277	ENSMODG00000013570	SUPT5H	99	84.231	Monodelphis_domestica
ENSXETG00000002888	supt5h	99	86.661	ENSMALG00000017833	supt5h	98	86.827	Monopterus_albus
ENSXETG00000002888	supt5h	99	88.540	MGP_CAROLIEiJ_G0029441	Supt5	99	88.447	Mus_caroli
ENSXETG00000002888	supt5h	99	88.203	ENSMUSG00000003435	Supt5	99	88.111	Mus_musculus
ENSXETG00000002888	supt5h	99	88.447	MGP_PahariEiJ_G0012677	Supt5	99	88.355	Mus_pahari
ENSXETG00000002888	supt5h	99	88.540	MGP_SPRETEiJ_G0030539	Supt5	99	88.447	Mus_spretus
ENSXETG00000002888	supt5h	99	89.328	ENSMPUG00000017721	SUPT5H	99	89.236	Mustela_putorius_furo
ENSXETG00000002888	supt5h	99	85.343	ENSMLUG00000008079	-	97	87.236	Myotis_lucifugus
ENSXETG00000002888	supt5h	99	88.787	ENSMLUG00000013886	-	99	88.695	Myotis_lucifugus
ENSXETG00000002888	supt5h	99	88.122	ENSNGAG00000022458	Supt5	99	88.029	Nannospalax_galili
ENSXETG00000002888	supt5h	80	81.749	ENSNBRG00000005030	supt5h	72	80.832	Neolamprologus_brichardi
ENSXETG00000002888	supt5h	94	89.567	ENSNLEG00000014365	SUPT5H	96	89.567	Nomascus_leucogenys
ENSXETG00000002888	supt5h	93	86.128	ENSMEUG00000016423	SUPT5H	98	85.844	Notamacropus_eugenii
ENSXETG00000002888	supt5h	97	84.681	ENSOPRG00000016844	SUPT5H	100	84.396	Ochotona_princeps
ENSXETG00000002888	supt5h	99	88.868	ENSODEG00000016445	SUPT5H	99	88.960	Octodon_degus
ENSXETG00000002888	supt5h	94	88.834	ENSONIG00000001100	supt5h	95	88.365	Oreochromis_niloticus
ENSXETG00000002888	supt5h	81	89.444	ENSOANG00000008175	SUPT5H	100	89.103	Ornithorhynchus_anatinus
ENSXETG00000002888	supt5h	99	88.848	ENSOCUG00000002155	SUPT5H	99	88.479	Oryctolagus_cuniculus
ENSXETG00000002888	supt5h	94	87.353	ENSORLG00000000394	supt5h	95	86.802	Oryzias_latipes
ENSXETG00000002888	supt5h	94	87.451	ENSORLG00020021680	supt5h	95	86.898	Oryzias_latipes_hni
ENSXETG00000002888	supt5h	94	87.451	ENSORLG00015010686	supt5h	95	86.994	Oryzias_latipes_hsok
ENSXETG00000002888	supt5h	99	89.144	ENSOGAG00000033979	SUPT5H	99	89.052	Otolemur_garnettii
ENSXETG00000002888	supt5h	99	88.132	ENSOARG00000006174	SUPT5H	99	88.040	Ovis_aries
ENSXETG00000002888	supt5h	99	89.843	ENSPPAG00000040180	SUPT5H	99	90.397	Pan_paniscus
ENSXETG00000002888	supt5h	99	89.566	ENSPPRG00000009686	SUPT5H	99	89.474	Panthera_pardus
ENSXETG00000002888	supt5h	99	89.658	ENSPTIG00000011633	SUPT5H	99	89.566	Panthera_tigris_altaica
ENSXETG00000002888	supt5h	99	89.843	ENSPTRG00000010971	SUPT5H	99	90.397	Pan_troglodytes
ENSXETG00000002888	supt5h	99	89.751	ENSPANG00000007383	SUPT5H	99	89.658	Papio_anubis
ENSXETG00000002888	supt5h	94	89.118	ENSPKIG00000006261	supt5h	99	87.580	Paramormyrops_kingsleyae
ENSXETG00000002888	supt5h	99	87.386	ENSPSIG00000014117	SUPT5H	99	87.294	Pelodiscus_sinensis
ENSXETG00000002888	supt5h	90	85.056	ENSPMGG00000020581	supt5h	96	84.954	Periophthalmus_magnuspinnatus
ENSXETG00000002888	supt5h	99	88.029	ENSPEMG00000015730	Supt5	99	87.845	Peromyscus_maniculatus_bairdii
ENSXETG00000002888	supt5h	100	77.605	ENSPMAG00000006913	supt5h	95	78.298	Petromyzon_marinus
ENSXETG00000002888	supt5h	94	92.020	ENSPCIG00000010477	SUPT5H	99	89.042	Phascolarctos_cinereus
ENSXETG00000002888	supt5h	92	85.586	ENSPFOG00000011126	supt5h	100	84.669	Poecilia_formosa
ENSXETG00000002888	supt5h	94	88.235	ENSPLAG00000013092	supt5h	95	87.488	Poecilia_latipinna
ENSXETG00000002888	supt5h	87	88.653	ENSPMEG00000020479	supt5h	93	87.838	Poecilia_mexicana
ENSXETG00000002888	supt5h	99	85.089	ENSPREG00000006712	supt5h	94	86.122	Poecilia_reticulata
ENSXETG00000002888	supt5h	99	88.735	ENSPPYG00000009968	SUPT5H	99	88.643	Pongo_abelii
ENSXETG00000002888	supt5h	94	73.039	ENSPCAG00000010830	SUPT5H	99	73.413	Procavia_capensis
ENSXETG00000002888	supt5h	99	89.474	ENSPCOG00000021231	SUPT5H	99	89.474	Propithecus_coquereli
ENSXETG00000002888	supt5h	72	95.340	ENSPVAG00000011129	SUPT5H	71	95.340	Pteropus_vampyrus
ENSXETG00000002888	supt5h	94	86.248	ENSPNYG00000009203	supt5h	95	86.149	Pundamilia_nyererei
ENSXETG00000002888	supt5h	94	81.934	ENSPNAG00000010925	supt5h	98	81.738	Pygocentrus_nattereri
ENSXETG00000002888	supt5h	99	85.281	ENSRNOG00000032034	Supt5h	100	91.120	Rattus_norvegicus
ENSXETG00000002888	supt5h	97	89.688	ENSRBIG00000039828	SUPT5H	94	90.462	Rhinopithecus_bieti
ENSXETG00000002888	supt5h	99	89.751	ENSRROG00000019625	SUPT5H	99	89.658	Rhinopithecus_roxellana
ENSXETG00000002888	supt5h	99	89.566	ENSSBOG00000022657	SUPT5H	99	89.474	Saimiri_boliviensis_boliviensis
ENSXETG00000002888	supt5h	91	86.904	ENSSHAG00000009504	SUPT5H	99	87.107	Sarcophilus_harrisii
ENSXETG00000002888	supt5h	94	89.676	ENSSFOG00015005973	supt5h	99	88.273	Scleropages_formosus
ENSXETG00000002888	supt5h	87	88.365	ENSSMAG00000004503	supt5h	98	86.190	Scophthalmus_maximus
ENSXETG00000002888	supt5h	94	89.381	ENSSDUG00000014520	supt5h	99	87.431	Seriola_dumerili
ENSXETG00000002888	supt5h	94	89.479	ENSSLDG00000008112	supt5h	99	87.431	Seriola_lalandi_dorsalis
ENSXETG00000002888	supt5h	54	96.377	ENSSARG00000000997	-	64	96.377	Sorex_araneus
ENSXETG00000002888	supt5h	91	89.048	ENSSPUG00000011434	SUPT5H	96	87.802	Sphenodon_punctatus
ENSXETG00000002888	supt5h	94	89.282	ENSSPAG00000010429	supt5h	99	87.719	Stegastes_partitus
ENSXETG00000002888	supt5h	99	87.153	ENSSSCG00000023556	SUPT5H	99	84.934	Sus_scrofa
ENSXETG00000002888	supt5h	94	87.217	ENSTRUG00000002370	supt5h	100	85.596	Takifugu_rubripes
ENSXETG00000002888	supt5h	95	87.078	ENSTNIG00000011178	supt5h	99	84.940	Tetraodon_nigroviridis
ENSXETG00000002888	supt5h	65	79.301	ENSTBEG00000017617	SUPT5H	96	79.624	Tupaia_belangeri
ENSXETG00000002888	supt5h	99	88.684	ENSTTRG00000003573	SUPT5H	99	88.592	Tursiops_truncatus
ENSXETG00000002888	supt5h	99	89.420	ENSUAMG00000020014	SUPT5H	99	89.328	Ursus_americanus
ENSXETG00000002888	supt5h	94	91.765	ENSUMAG00000019558	SUPT5H	98	91.145	Ursus_maritimus
ENSXETG00000002888	supt5h	91	91.539	ENSVVUG00000006193	SUPT5H	93	91.548	Vulpes_vulpes
ENSXETG00000002888	supt5h	99	84.716	ENSXMAG00000004169	supt5h	94	86.024	Xiphophorus_maculatus