EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002899 (Gene tree)
Gene ID: -
Gene Symbol: zfp36
Alias: -
Full Name: Xenopus tropicalis ZFP36 ring finger protein (zfp36)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5159 bases
Position: chrGL173025.1:111645-116803
Accession: NM_001113071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006345	zf-CCCH	PF00642.24	1.7e-23	1	2
ENSXETP00000006345	zf-CCCH	PF00642.24	1.7e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006345	-	2691	-	ENSXETP00000006345	313 (aa)	-	A8WGZ9

Gene Model

Click here to download ENSXETG00000002899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002899	zfp36	70	35.271	ENSXETG00000016987	zfp36l1	69	38.189
ENSXETG00000002899	zfp36	60	39.819	ENSXETG00000009274	zfp36l2	60	39.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002899	zfp36	79	47.810	ENSG00000128016	ZFP36	67	50.661	Homo_sapiens
ENSXETG00000002899	zfp36	79	48.000	ENSAMEG00000008499	ZFP36	71	50.213	Ailuropoda_melanoleuca
ENSXETG00000002899	zfp36	79	47.619	ENSANAG00000034306	ZFP36	70	51.931	Aotus_nancymaae
ENSXETG00000002899	zfp36	79	47.985	ENSCJAG00000014156	ZFP36	70	52.361	Callithrix_jacchus
ENSXETG00000002899	zfp36	79	48.387	ENSCPOG00000038352	ZFP36	70	50.885	Cavia_porcellus
ENSXETG00000002899	zfp36	79	47.985	ENSCCAG00000034094	ZFP36	70	52.361	Cebus_capucinus
ENSXETG00000002899	zfp36	79	46.691	ENSCATG00000039148	ZFP36	67	51.101	Cercocebus_atys
ENSXETG00000002899	zfp36	79	46.454	ENSCLAG00000014820	ZFP36	70	48.918	Chinchilla_lanigera
ENSXETG00000002899	zfp36	79	46.691	ENSCSAG00000003862	ZFP36	67	51.101	Chlorocebus_sabaeus
ENSXETG00000002899	zfp36	100	48.256	ENSCPBG00000018753	ZFP36	98	49.713	Chrysemys_picta_bellii
ENSXETG00000002899	zfp36	79	46.691	ENSCANG00000010605	ZFP36	67	51.101	Colobus_angolensis_palliatus
ENSXETG00000002899	zfp36	63	48.165	ENSDNOG00000033326	ZFP36	66	51.724	Dasypus_novemcinctus
ENSXETG00000002899	zfp36	99	45.672	ENSDORG00000013487	Zfp36	70	55.310	Dipodomys_ordii
ENSXETG00000002899	zfp36	67	50.439	ENSEASG00005012802	ZFP36	84	48.000	Equus_asinus_asinus
ENSXETG00000002899	zfp36	67	50.439	ENSECAG00000033926	ZFP36	84	48.000	Equus_caballus
ENSXETG00000002899	zfp36	79	46.619	ENSFDAG00000008740	ZFP36	72	47.660	Fukomys_damarensis
ENSXETG00000002899	zfp36	100	48.688	ENSGAGG00000021476	ZFP36	98	49.856	Gopherus_agassizii
ENSXETG00000002899	zfp36	79	47.810	ENSGGOG00000014399	ZFP36	67	50.661	Gorilla_gorilla
ENSXETG00000002899	zfp36	79	47.500	ENSHGLG00000007955	ZFP36	70	50.877	Heterocephalus_glaber_female
ENSXETG00000002899	zfp36	79	45.000	ENSHGLG00100017184	ZFP36	70	47.807	Heterocephalus_glaber_male
ENSXETG00000002899	zfp36	79	46.154	ENSSTOG00000019840	ZFP36	71	51.282	Ictidomys_tridecemlineatus
ENSXETG00000002899	zfp36	79	46.953	ENSJJAG00000011735	-	73	51.261	Jaculus_jaculus
ENSXETG00000002899	zfp36	79	47.312	ENSJJAG00000010452	-	73	52.101	Jaculus_jaculus
ENSXETG00000002899	zfp36	79	47.426	ENSMFAG00000000900	ZFP36	67	51.101	Macaca_fascicularis
ENSXETG00000002899	zfp36	79	46.691	ENSMMUG00000038702	ZFP36	67	51.101	Macaca_mulatta
ENSXETG00000002899	zfp36	79	46.691	ENSMNEG00000039734	ZFP36	67	51.101	Macaca_nemestrina
ENSXETG00000002899	zfp36	79	46.715	ENSMLEG00000041066	ZFP36	67	51.101	Mandrillus_leucophaeus
ENSXETG00000002899	zfp36	79	48.736	ENSMAUG00000021250	Zfp36	71	54.018	Mesocricetus_auratus
ENSXETG00000002899	zfp36	79	49.091	ENSMICG00000026814	ZFP36	68	52.193	Microcebus_murinus
ENSXETG00000002899	zfp36	60	44.976	ENSMOCG00000014548	Zfp36	74	52.101	Microtus_ochrogaster
ENSXETG00000002899	zfp36	72	50.193	ENSMODG00000013494	ZFP36	67	48.374	Monodelphis_domestica
ENSXETG00000002899	zfp36	99	41.716	MGP_CAROLIEiJ_G0029444	Zfp36	100	43.732	Mus_caroli
ENSXETG00000002899	zfp36	99	40.407	ENSMUSG00000044786	Zfp36	100	43.440	Mus_musculus
ENSXETG00000002899	zfp36	99	40.116	MGP_PahariEiJ_G0012680	Zfp36	100	44.606	Mus_pahari
ENSXETG00000002899	zfp36	99	40.407	MGP_SPRETEiJ_G0030542	Zfp36	100	43.440	Mus_spretus
ENSXETG00000002899	zfp36	79	43.816	ENSMPUG00000017726	ZFP36	72	46.414	Mustela_putorius_furo
ENSXETG00000002899	zfp36	79	47.970	ENSMLUG00000002942	ZFP36	70	49.782	Myotis_lucifugus
ENSXETG00000002899	zfp36	84	46.644	ENSNGAG00000019033	Zfp36	99	42.165	Nannospalax_galili
ENSXETG00000002899	zfp36	79	46.125	ENSNLEG00000014418	ZFP36	66	49.107	Nomascus_leucogenys
ENSXETG00000002899	zfp36	94	38.202	ENSMEUG00000010317	ZFP36	98	41.796	Notamacropus_eugenii
ENSXETG00000002899	zfp36	83	47.603	ENSODEG00000016693	ZFP36	100	44.606	Octodon_degus
ENSXETG00000002899	zfp36	79	47.857	ENSOCUG00000003400	ZFP36	74	50.427	Oryctolagus_cuniculus
ENSXETG00000002899	zfp36	79	48.214	ENSOGAG00000034231	ZFP36	71	52.586	Otolemur_garnettii
ENSXETG00000002899	zfp36	79	48.905	ENSOARG00000006068	ZFP36	100	43.917	Ovis_aries
ENSXETG00000002899	zfp36	79	47.810	ENSPPAG00000032232	ZFP36	67	50.661	Pan_paniscus
ENSXETG00000002899	zfp36	79	47.810	ENSPTRG00000010968	ZFP36	67	50.661	Pan_troglodytes
ENSXETG00000002899	zfp36	79	46.691	ENSPANG00000007276	ZFP36	67	51.101	Papio_anubis
ENSXETG00000002899	zfp36	67	44.444	ENSPCIG00000010489	ZFP36	74	46.586	Phascolarctos_cinereus
ENSXETG00000002899	zfp36	79	45.196	ENSPVAG00000011124	ZFP36	73	49.372	Pteropus_vampyrus
ENSXETG00000002899	zfp36	61	44.700	ENSRNOG00000058388	Zfp36	71	51.282	Rattus_norvegicus
ENSXETG00000002899	zfp36	79	47.985	ENSSBOG00000033740	ZFP36	70	52.361	Saimiri_boliviensis_boliviensis
ENSXETG00000002899	zfp36	67	47.200	ENSSHAG00000009151	-	92	44.615	Sarcophilus_harrisii
ENSXETG00000002899	zfp36	100	49.438	ENSSPUG00000011402	ZFP36	100	51.124	Sphenodon_punctatus
ENSXETG00000002899	zfp36	99	43.605	ENSSSCG00000028056	ZFP36	69	50.877	Sus_scrofa
ENSXETG00000002899	zfp36	79	48.699	ENSTBEG00000005948	ZFP36	73	53.247	Tupaia_belangeri
ENSXETG00000002899	zfp36	79	48.718	ENSTTRG00000003564	ZFP36	84	45.421	Tursiops_truncatus
ENSXETG00000002899	zfp36	79	48.000	ENSUAMG00000009986	ZFP36	71	49.787	Ursus_americanus
ENSXETG00000002899	zfp36	79	47.273	ENSUMAG00000019533	ZFP36	72	49.787	Ursus_maritimus