EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000002904 (Gene tree)
Gene ID: -
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 84040 bases
Position: chrGL172936.1:1190598-1274637
Accession: XB-GENE-955461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006377	ResIII	PF04851.15	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006377	-	5445	-	ENSXETP00000006377	1815 (aa)	-	F7ECA7

Gene Model

Click here to download ENSXETG00000002904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000002904	chd5	65	73.229	ENSXETG00000026410	chd4	100	77.489
ENSXETG00000002904	chd5	53	67.706	ENSXETG00000018961	-	94	67.606
ENSXETG00000002904	chd5	97	64.146	ENSXETG00000012991	chd3	90	63.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002904	chd5	100	78.200	ENSG00000116254	CHD5	92	84.308	Homo_sapiens
ENSXETG00000002904	chd5	100	77.951	ENSAMEG00000009880	CHD5	98	78.553	Ailuropoda_melanoleuca
ENSXETG00000002904	chd5	97	73.961	ENSACIG00000012582	chd5	98	74.810	Amphilophus_citrinellus
ENSXETG00000002904	chd5	97	74.729	ENSAOCG00000020356	chd5	93	73.952	Amphiprion_ocellaris
ENSXETG00000002904	chd5	98	75.897	ENSAPLG00000015475	CHD5	98	76.101	Anas_platyrhynchos
ENSXETG00000002904	chd5	99	75.597	ENSACAG00000002441	CHD5	96	76.253	Anolis_carolinensis
ENSXETG00000002904	chd5	90	78.489	ENSANAG00000001078	CHD5	95	76.709	Aotus_nancymaae
ENSXETG00000002904	chd5	97	72.145	ENSACLG00000003012	chd5	99	71.506	Astatotilapia_calliptera
ENSXETG00000002904	chd5	95	74.194	ENSAMXG00000008921	chd5	99	74.532	Astyanax_mexicanus
ENSXETG00000002904	chd5	96	79.064	ENSBTAG00000040477	CHD5	99	80.380	Bos_taurus
ENSXETG00000002904	chd5	100	78.512	ENSCJAG00000000101	CHD5	96	79.016	Callithrix_jacchus
ENSXETG00000002904	chd5	96	79.838	ENSCAFG00000019545	CHD5	99	80.315	Canis_familiaris
ENSXETG00000002904	chd5	100	80.424	ENSCAFG00020008689	CHD5	93	80.899	Canis_lupus_dingo
ENSXETG00000002904	chd5	100	78.505	ENSCHIG00000015027	CHD5	94	79.267	Capra_hircus
ENSXETG00000002904	chd5	99	74.961	ENSTSYG00000033991	CHD5	97	75.728	Carlito_syrichta
ENSXETG00000002904	chd5	99	79.809	ENSCAPG00000009294	CHD5	98	80.578	Cavia_aperea
ENSXETG00000002904	chd5	99	79.809	ENSCPOG00000025080	CHD5	98	80.578	Cavia_porcellus
ENSXETG00000002904	chd5	100	78.505	ENSCCAG00000024756	CHD5	96	79.226	Cebus_capucinus
ENSXETG00000002904	chd5	100	78.166	ENSCATG00000043011	CHD5	96	79.193	Cercocebus_atys
ENSXETG00000002904	chd5	99	79.756	ENSCLAG00000010589	CHD5	98	80.578	Chinchilla_lanigera
ENSXETG00000002904	chd5	100	78.304	ENSCSAG00000000733	CHD5	96	79.278	Chlorocebus_sabaeus
ENSXETG00000002904	chd5	96	80.043	ENSCPBG00000019363	CHD5	99	80.748	Chrysemys_picta_bellii
ENSXETG00000002904	chd5	100	78.101	ENSCANG00000032302	CHD5	97	79.162	Colobus_angolensis_palliatus
ENSXETG00000002904	chd5	58	81.785	ENSCGRG00001011042	Chd5	99	82.625	Cricetulus_griseus_chok1gshd
ENSXETG00000002904	chd5	99	79.745	ENSCGRG00000011341	Chd5	98	80.352	Cricetulus_griseus_crigri
ENSXETG00000002904	chd5	96	67.510	ENSDARG00000025789	chd4b	96	64.650	Danio_rerio
ENSXETG00000002904	chd5	99	72.885	ENSDARG00000105083	chd5	97	77.850	Danio_rerio
ENSXETG00000002904	chd5	95	77.989	ENSDNOG00000046342	CHD5	96	74.869	Dasypus_novemcinctus
ENSXETG00000002904	chd5	99	79.713	ENSDORG00000005923	Chd5	98	80.588	Dipodomys_ordii
ENSXETG00000002904	chd5	99	78.511	ENSEASG00005021464	CHD5	94	93.548	Equus_asinus_asinus
ENSXETG00000002904	chd5	89	96.847	ENSECAG00000025043	CHD5	98	91.304	Equus_caballus
ENSXETG00000002904	chd5	73	95.327	ENSEEUG00000002772	CHD5	71	95.327	Erinaceus_europaeus
ENSXETG00000002904	chd5	97	73.810	ENSELUG00000010742	chd5	98	74.011	Esox_lucius
ENSXETG00000002904	chd5	100	78.553	ENSFCAG00000006319	CHD5	96	79.171	Felis_catus
ENSXETG00000002904	chd5	97	78.812	ENSFALG00000009740	CHD5	97	78.713	Ficedula_albicollis
ENSXETG00000002904	chd5	99	80.107	ENSFDAG00000012881	CHD5	95	79.225	Fukomys_damarensis
ENSXETG00000002904	chd5	97	79.399	ENSGALG00000000747	CHD5	97	79.066	Gallus_gallus
ENSXETG00000002904	chd5	60	77.437	ENSGACG00000004389	chd5	98	75.815	Gasterosteus_aculeatus
ENSXETG00000002904	chd5	91	96.078	ENSGAGG00000001590	CHD5	99	96.078	Gopherus_agassizii
ENSXETG00000002904	chd5	100	78.200	ENSGGOG00000000708	CHD5	98	79.058	Gorilla_gorilla
ENSXETG00000002904	chd5	97	72.974	ENSHBUG00000013453	chd5	99	72.312	Haplochromis_burtoni
ENSXETG00000002904	chd5	99	80.332	ENSHGLG00000018184	CHD5	99	78.815	Heterocephalus_glaber_female
ENSXETG00000002904	chd5	81	75.932	ENSHGLG00100013261	CHD5	97	72.585	Heterocephalus_glaber_male
ENSXETG00000002904	chd5	97	74.601	ENSIPUG00000005446	chd5	98	75.151	Ictalurus_punctatus
ENSXETG00000002904	chd5	99	79.968	ENSSTOG00000002778	CHD5	98	80.685	Ictidomys_tridecemlineatus
ENSXETG00000002904	chd5	99	79.776	ENSJJAG00000019072	Chd5	96	80.386	Jaculus_jaculus
ENSXETG00000002904	chd5	100	77.418	ENSLOCG00000004944	chd5	96	77.689	Lepisosteus_oculatus
ENSXETG00000002904	chd5	97	82.041	ENSLAFG00000006348	CHD5	100	82.297	Loxodonta_africana
ENSXETG00000002904	chd5	100	78.200	ENSMFAG00000033993	CHD5	99	80.260	Macaca_fascicularis
ENSXETG00000002904	chd5	99	80.341	ENSMMUG00000016838	CHD5	96	81.029	Macaca_mulatta
ENSXETG00000002904	chd5	100	78.252	ENSMNEG00000040044	CHD5	96	79.278	Macaca_nemestrina
ENSXETG00000002904	chd5	100	76.023	ENSMLEG00000039166	CHD5	98	76.617	Mandrillus_leucophaeus
ENSXETG00000002904	chd5	97	71.657	ENSMZEG00005000841	chd5	99	71.039	Maylandia_zebra
ENSXETG00000002904	chd5	97	79.347	ENSMGAG00000001055	CHD5	96	79.016	Meleagris_gallopavo
ENSXETG00000002904	chd5	99	79.404	ENSMICG00000017862	CHD5	96	79.808	Microcebus_murinus
ENSXETG00000002904	chd5	99	79.788	ENSMOCG00000011049	Chd5	96	80.502	Microtus_ochrogaster
ENSXETG00000002904	chd5	85	72.781	ENSMODG00000006294	CHD5	72	89.936	Monodelphis_domestica
ENSXETG00000002904	chd5	97	73.970	ENSMALG00000002831	chd5	99	72.655	Monopterus_albus
ENSXETG00000002904	chd5	99	78.068	MGP_CAROLIEiJ_G0026857	Chd5	96	78.601	Mus_caroli
ENSXETG00000002904	chd5	99	79.426	ENSMUSG00000005045	Chd5	96	80.086	Mus_musculus
ENSXETG00000002904	chd5	99	79.533	MGP_PahariEiJ_G0029205	Chd5	96	80.332	Mus_pahari
ENSXETG00000002904	chd5	99	79.659	MGP_SPRETEiJ_G0027850	Chd5	96	80.214	Mus_spretus
ENSXETG00000002904	chd5	97	90.845	ENSMPUG00000007122	CHD5	90	90.845	Mustela_putorius_furo
ENSXETG00000002904	chd5	100	77.628	ENSNGAG00000019812	Chd5	94	78.329	Nannospalax_galili
ENSXETG00000002904	chd5	100	76.516	ENSNLEG00000010320	CHD5	98	76.947	Nomascus_leucogenys
ENSXETG00000002904	chd5	85	76.584	ENSOPRG00000004304	CHD5	85	76.655	Ochotona_princeps
ENSXETG00000002904	chd5	100	80.053	ENSODEG00000010262	CHD5	98	80.471	Octodon_degus
ENSXETG00000002904	chd5	97	73.951	ENSONIG00000000619	chd5	96	73.368	Oreochromis_niloticus
ENSXETG00000002904	chd5	99	68.011	ENSOANG00000001819	CHD5	98	68.011	Ornithorhynchus_anatinus
ENSXETG00000002904	chd5	97	79.517	ENSOGAG00000005703	CHD5	93	79.989	Otolemur_garnettii
ENSXETG00000002904	chd5	98	76.988	ENSOARG00000013425	CHD5	95	78.266	Ovis_aries
ENSXETG00000002904	chd5	100	78.159	ENSPPAG00000034048	CHD5	98	79.143	Pan_paniscus
ENSXETG00000002904	chd5	100	78.032	ENSPPRG00000009453	CHD5	96	78.646	Panthera_pardus
ENSXETG00000002904	chd5	100	73.872	ENSPTIG00000013926	CHD5	98	74.477	Panthera_tigris_altaica
ENSXETG00000002904	chd5	100	78.159	ENSPTRG00000000075	CHD5	96	79.143	Pan_troglodytes
ENSXETG00000002904	chd5	100	78.252	ENSPANG00000006765	CHD5	96	79.278	Papio_anubis
ENSXETG00000002904	chd5	98	74.176	ENSPKIG00000004282	chd5	98	74.657	Paramormyrops_kingsleyae
ENSXETG00000002904	chd5	97	73.878	ENSPSIG00000006414	CHD5	99	73.560	Pelodiscus_sinensis
ENSXETG00000002904	chd5	69	81.056	ENSPEMG00000014799	Chd5	97	81.647	Peromyscus_maniculatus_bairdii
ENSXETG00000002904	chd5	100	80.308	ENSPCIG00000028310	CHD5	95	79.341	Phascolarctos_cinereus
ENSXETG00000002904	chd5	97	73.558	ENSPLAG00000005343	chd5	99	72.205	Poecilia_latipinna
ENSXETG00000002904	chd5	100	79.292	ENSPPYG00000001952	CHD5	98	80.021	Pongo_abelii
ENSXETG00000002904	chd5	99	78.983	ENSPCOG00000022930	CHD5	96	79.328	Propithecus_coquereli
ENSXETG00000002904	chd5	97	73.144	ENSPNYG00000003183	chd5	98	73.635	Pundamilia_nyererei
ENSXETG00000002904	chd5	99	78.079	ENSRNOG00000011268	Chd5	97	78.613	Rattus_norvegicus
ENSXETG00000002904	chd5	93	95.200	ENSRBIG00000032140	CHD5	96	81.586	Rhinopithecus_bieti
ENSXETG00000002904	chd5	100	78.148	ENSRROG00000041146	CHD5	96	79.162	Rhinopithecus_roxellana
ENSXETG00000002904	chd5	100	75.745	ENSSBOG00000001955	CHD5	99	80.351	Saimiri_boliviensis_boliviensis
ENSXETG00000002904	chd5	100	73.340	ENSSHAG00000018641	CHD5	99	73.654	Sarcophilus_harrisii
ENSXETG00000002904	chd5	99	73.819	ENSSFOG00015006296	chd5	96	74.416	Scleropages_formosus
ENSXETG00000002904	chd5	97	73.854	ENSSDUG00000017526	chd5	99	74.475	Seriola_dumerili
ENSXETG00000002904	chd5	100	73.266	ENSSPUG00000010622	CHD5	97	73.850	Sphenodon_punctatus
ENSXETG00000002904	chd5	98	78.860	ENSSSCG00000003366	CHD5	99	80.413	Sus_scrofa
ENSXETG00000002904	chd5	94	77.592	ENSTGUG00000002634	-	100	76.961	Taeniopygia_guttata
ENSXETG00000002904	chd5	56	77.703	ENSTNIG00000004346	chd5	99	78.089	Tetraodon_nigroviridis
ENSXETG00000002904	chd5	100	78.828	ENSTTRG00000010468	CHD5	97	79.286	Tursiops_truncatus
ENSXETG00000002904	chd5	100	80.362	ENSUAMG00000024509	CHD5	96	87.124	Ursus_americanus
ENSXETG00000002904	chd5	100	76.865	ENSUMAG00000024173	CHD5	98	76.812	Ursus_maritimus
ENSXETG00000002904	chd5	88	97.333	ENSVVUG00000026480	CHD5	91	97.333	Vulpes_vulpes
ENSXETG00000002904	chd5	61	84.375	ENSXCOG00000014202	chd5	99	84.375	Xiphophorus_couchianus