EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002941 (Gene tree)
Gene ID: -
Gene Symbol: eif3c
Alias: -
Full Name: Xenopus tropicalis eukaryotic translation initiation factor 3 subunit C (eif3c)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 14378 bases
Position: chrGL173938.1:677-15054
Accession: NM_204082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000056875	eIF-3c_N	PF05470.12	2.2e-257	1	1
ENSXETP00000006431	eIF-3c_N	PF05470.12	1.6e-255	1	2
ENSXETP00000006431	eIF-3c_N	PF05470.12	1.6e-255	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000056875	-	2965	-	ENSXETP00000056875	920 (aa)	-	F7E2Z1
ENSXETT00000006431	-	2971	-	ENSXETP00000006431	922 (aa)	-	Q6P1V4

Gene Model

Click here to download ENSXETG00000002941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002941's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002941	eif3c	100	79.180	ENSG00000205609	EIF3CL	100	78.510	Homo_sapiens
ENSXETG00000002941	eif3c	100	79.072	ENSG00000184110	EIF3C	100	89.873	Homo_sapiens
ENSXETG00000002941	eif3c	100	76.514	ENSAPOG00000024092	eif3c	93	84.472	Acanthochromis_polyacanthus
ENSXETG00000002941	eif3c	100	79.180	ENSAMEG00000015454	-	100	78.618	Ailuropoda_melanoleuca
ENSXETG00000002941	eif3c	100	74.484	ENSACIG00000015082	eif3c	94	83.388	Amphilophus_citrinellus
ENSXETG00000002941	eif3c	100	76.727	ENSAOCG00000021466	eif3c	96	83.660	Amphiprion_ocellaris
ENSXETG00000002941	eif3c	100	76.727	ENSAPEG00000010521	eif3c	96	83.660	Amphiprion_percula
ENSXETG00000002941	eif3c	100	76.408	ENSATEG00000019001	eif3c	100	76.809	Anabas_testudineus
ENSXETG00000002941	eif3c	100	81.533	ENSACAG00000005937	-	100	81.425	Anolis_carolinensis
ENSXETG00000002941	eif3c	100	79.072	ENSANAG00000020640	-	100	78.402	Aotus_nancymaae
ENSXETG00000002941	eif3c	84	81.463	ENSACLG00000009322	eif3c	92	83.230	Astatotilapia_calliptera
ENSXETG00000002941	eif3c	84	85.714	ENSACLG00000009347	eif3c	90	85.714	Astatotilapia_calliptera
ENSXETG00000002941	eif3c	99	77.074	ENSAMXG00000020949	eif3c	99	77.253	Astyanax_mexicanus
ENSXETG00000002941	eif3c	100	78.162	ENSBTAG00000006543	EIF3CL	100	78.270	Bos_taurus
ENSXETG00000002941	eif3c	99	43.636	WBGene00001226	eif-3.C	97	41.836	Caenorhabditis_elegans
ENSXETG00000002941	eif3c	100	78.834	ENSCJAG00000006341	-	100	78.618	Callithrix_jacchus
ENSXETG00000002941	eif3c	100	79.180	ENSCAFG00000017143	-	100	78.510	Canis_familiaris
ENSXETG00000002941	eif3c	100	79.180	ENSCAFG00020017587	-	100	78.510	Canis_lupus_dingo
ENSXETG00000002941	eif3c	100	78.054	ENSCHIG00000024795	-	100	78.162	Capra_hircus
ENSXETG00000002941	eif3c	100	78.964	ENSTSYG00000003486	-	100	78.402	Carlito_syrichta
ENSXETG00000002941	eif3c	96	70.871	ENSCAPG00000015887	-	100	70.982	Cavia_aperea
ENSXETG00000002941	eif3c	100	78.749	ENSCPOG00000007533	-	100	78.186	Cavia_porcellus
ENSXETG00000002941	eif3c	100	74.757	ENSCCAG00000027724	-	100	73.326	Cebus_capucinus
ENSXETG00000002941	eif3c	99	68.237	ENSCCAG00000029099	-	98	66.521	Cebus_capucinus
ENSXETG00000002941	eif3c	100	78.811	ENSCCAG00000034928	-	100	78.463	Cebus_capucinus
ENSXETG00000002941	eif3c	100	78.964	ENSCATG00000032673	-	100	78.294	Cercocebus_atys
ENSXETG00000002941	eif3c	100	78.294	ENSCLAG00000011094	-	100	78.078	Chinchilla_lanigera
ENSXETG00000002941	eif3c	100	78.964	ENSCSAG00000006297	-	100	78.294	Chlorocebus_sabaeus
ENSXETG00000002941	eif3c	53	69.498	ENSCHOG00000003120	-	85	69.498	Choloepus_hoffmanni
ENSXETG00000002941	eif3c	80	73.333	ENSCPBG00000012407	-	94	73.954	Chrysemys_picta_bellii
ENSXETG00000002941	eif3c	78	55.746	ENSCSAVG00000006744	-	95	55.670	Ciona_savignyi
ENSXETG00000002941	eif3c	100	78.964	ENSCANG00000033626	-	100	78.294	Colobus_angolensis_palliatus
ENSXETG00000002941	eif3c	100	77.754	ENSCGRG00001015265	EIF3C	100	77.538	Cricetulus_griseus_chok1gshd
ENSXETG00000002941	eif3c	100	76.226	ENSCSEG00000017770	eif3c	100	76.226	Cynoglossus_semilaevis
ENSXETG00000002941	eif3c	94	84.740	ENSCVAG00000005402	eif3c	100	84.740	Cyprinodon_variegatus
ENSXETG00000002941	eif3c	100	76.175	ENSDARG00000016443	eif3c	100	76.439	Danio_rerio
ENSXETG00000002941	eif3c	100	79.072	ENSDNOG00000031497	-	100	78.510	Dasypus_novemcinctus
ENSXETG00000002941	eif3c	100	78.641	ENSDORG00000016471	Eif3c	100	78.078	Dipodomys_ordii
ENSXETG00000002941	eif3c	97	51.670	FBgn0034258	eIF3c	97	50.162	Drosophila_melanogaster
ENSXETG00000002941	eif3c	92	82.301	ENSETEG00000013527	-	92	82.301	Echinops_telfairi
ENSXETG00000002941	eif3c	99	61.905	ENSEBUG00000001629	eif3c	99	61.849	Eptatretus_burgeri
ENSXETG00000002941	eif3c	100	78.964	ENSECAG00000008746	-	100	78.402	Equus_caballus
ENSXETG00000002941	eif3c	63	56.897	ENSEEUG00000000726	-	64	56.397	Erinaceus_europaeus
ENSXETG00000002941	eif3c	87	78.580	ENSEEUG00000006148	-	100	78.331	Erinaceus_europaeus
ENSXETG00000002941	eif3c	100	77.419	ENSELUG00000022257	eif3c	92	84.236	Esox_lucius
ENSXETG00000002941	eif3c	100	79.288	ENSFCAG00000015782	-	100	78.618	Felis_catus
ENSXETG00000002941	eif3c	100	78.533	ENSFDAG00000003588	-	100	77.862	Fukomys_damarensis
ENSXETG00000002941	eif3c	100	77.258	ENSFHEG00000014154	EIF3C	100	76.621	Fundulus_heteroclitus
ENSXETG00000002941	eif3c	96	76.477	ENSGMOG00000016885	eif3c	100	77.146	Gadus_morhua
ENSXETG00000002941	eif3c	95	77.288	ENSGACG00000007652	eif3c	100	76.375	Gasterosteus_aculeatus
ENSXETG00000002941	eif3c	92	77.804	ENSGAGG00000006666	-	100	78.271	Gopherus_agassizii
ENSXETG00000002941	eif3c	99	77.140	ENSGGOG00000026919	EIF3C	100	78.139	Gorilla_gorilla
ENSXETG00000002941	eif3c	52	80.695	ENSGGOG00000022677	-	100	80.695	Gorilla_gorilla
ENSXETG00000002941	eif3c	100	78.749	ENSHGLG00000011445	EIF3C	100	78.078	Heterocephalus_glaber_female
ENSXETG00000002941	eif3c	100	78.749	ENSHGLG00100000217	EIF3C	100	78.078	Heterocephalus_glaber_male
ENSXETG00000002941	eif3c	100	75.987	ENSHCOG00000019694	eif3c	100	76.521	Hippocampus_comes
ENSXETG00000002941	eif3c	100	76.527	ENSIPUG00000016878	eif3c	100	76.635	Ictalurus_punctatus
ENSXETG00000002941	eif3c	100	79.072	ENSSTOG00000021278	-	100	78.402	Ictidomys_tridecemlineatus
ENSXETG00000002941	eif3c	100	78.101	ENSJJAG00000012722	Eif3c	100	77.538	Jaculus_jaculus
ENSXETG00000002941	eif3c	98	78.094	ENSKMAG00000021662	eif3c	99	75.687	Kryptolebias_marmoratus
ENSXETG00000002941	eif3c	98	77.643	ENSLBEG00000023370	eif3c	100	75.987	Labrus_bergylta
ENSXETG00000002941	eif3c	97	81.535	ENSLACG00000000770	eif3c	100	82.468	Latimeria_chalumnae
ENSXETG00000002941	eif3c	100	78.857	ENSLAFG00000027426	-	100	78.294	Loxodonta_africana
ENSXETG00000002941	eif3c	100	78.964	ENSMFAG00000041930	-	100	78.294	Macaca_fascicularis
ENSXETG00000002941	eif3c	100	78.964	ENSMMUG00000011798	-	100	78.294	Macaca_mulatta
ENSXETG00000002941	eif3c	100	78.964	ENSMNEG00000023915	-	100	78.294	Macaca_nemestrina
ENSXETG00000002941	eif3c	100	78.964	ENSMLEG00000027529	-	100	78.294	Mandrillus_leucophaeus
ENSXETG00000002941	eif3c	100	76.939	ENSMAMG00000012512	eif3c	98	83.415	Mastacembelus_armatus
ENSXETG00000002941	eif3c	84	81.301	ENSMZEG00005013685	eif3c	92	83.230	Maylandia_zebra
ENSXETG00000002941	eif3c	95	82.820	ENSMZEG00005013699	eif3c	89	85.714	Maylandia_zebra
ENSXETG00000002941	eif3c	100	77.754	ENSMAUG00000010621	Eif3c	100	77.538	Mesocricetus_auratus
ENSXETG00000002941	eif3c	100	79.612	ENSMICG00000036748	-	100	79.050	Microcebus_murinus
ENSXETG00000002941	eif3c	100	76.350	ENSMOCG00000004204	Eif3c	100	76.242	Microtus_ochrogaster
ENSXETG00000002941	eif3c	100	73.696	ENSMMOG00000001572	eif3c	96	82.680	Mola_mola
ENSXETG00000002941	eif3c	100	79.243	ENSMODG00000015579	-	100	79.135	Monodelphis_domestica
ENSXETG00000002941	eif3c	85	83.333	ENSMALG00000008907	eif3c	94	83.333	Monopterus_albus
ENSXETG00000002941	eif3c	100	77.405	MGP_CAROLIEiJ_G0030451	Eif3c	100	77.056	Mus_caroli
ENSXETG00000002941	eif3c	100	77.405	ENSMUSG00000030738	Eif3c	100	77.056	Mus_musculus
ENSXETG00000002941	eif3c	100	76.840	MGP_PahariEiJ_G0013661	Eif3c	100	76.948	Mus_pahari
ENSXETG00000002941	eif3c	100	77.405	MGP_SPRETEiJ_G0031565	Eif3c	100	77.056	Mus_spretus
ENSXETG00000002941	eif3c	96	78.747	ENSMPUG00000012732	-	100	78.387	Mustela_putorius_furo
ENSXETG00000002941	eif3c	100	77.994	ENSMLUG00000015558	-	100	78.186	Myotis_lucifugus
ENSXETG00000002941	eif3c	100	78.533	ENSNGAG00000007177	-	100	77.970	Nannospalax_galili
ENSXETG00000002941	eif3c	73	69.091	ENSNGAG00000010901	-	84	69.091	Nannospalax_galili
ENSXETG00000002941	eif3c	100	69.083	ENSNLEG00000001425	-	91	76.667	Nomascus_leucogenys
ENSXETG00000002941	eif3c	85	63.566	ENSMEUG00000005317	-	95	64.348	Notamacropus_eugenii
ENSXETG00000002941	eif3c	100	65.297	ENSMEUG00000009939	-	99	65.554	Notamacropus_eugenii
ENSXETG00000002941	eif3c	100	77.862	ENSOPRG00000000931	-	100	77.754	Ochotona_princeps
ENSXETG00000002941	eif3c	100	78.402	ENSODEG00000013508	-	100	78.294	Octodon_degus
ENSXETG00000002941	eif3c	67	61.626	ENSONIG00000011434	eif3c	100	61.626	Oreochromis_niloticus
ENSXETG00000002941	eif3c	100	76.956	ENSOANG00000011410	-	100	76.956	Ornithorhynchus_anatinus
ENSXETG00000002941	eif3c	100	79.180	ENSOCUG00000022489	-	100	78.618	Oryctolagus_cuniculus
ENSXETG00000002941	eif3c	98	76.770	ENSORLG00000006318	eif3c	99	75.901	Oryzias_latipes
ENSXETG00000002941	eif3c	98	76.770	ENSORLG00020015713	eif3c	97	83.333	Oryzias_latipes_hni
ENSXETG00000002941	eif3c	98	76.211	ENSORLG00015013772	eif3c	98	76.623	Oryzias_latipes_hsok
ENSXETG00000002941	eif3c	100	75.080	ENSOMEG00000020450	eif3c	100	76.684	Oryzias_melastigma
ENSXETG00000002941	eif3c	100	78.964	ENSOGAG00000012737	-	100	78.402	Otolemur_garnettii
ENSXETG00000002941	eif3c	100	78.054	ENSOARG00000002892	-	100	78.162	Ovis_aries
ENSXETG00000002941	eif3c	100	79.288	ENSPPRG00000012336	-	100	78.618	Panthera_pardus
ENSXETG00000002941	eif3c	100	79.288	ENSPTIG00000011712	-	100	78.618	Panthera_tigris_altaica
ENSXETG00000002941	eif3c	100	78.964	ENSPANG00000021151	-	100	78.294	Papio_anubis
ENSXETG00000002941	eif3c	100	77.505	ENSPKIG00000002049	eif3c	100	76.866	Paramormyrops_kingsleyae
ENSXETG00000002941	eif3c	89	84.401	ENSPMGG00000005409	eif3c	94	84.401	Periophthalmus_magnuspinnatus
ENSXETG00000002941	eif3c	100	77.273	ENSPEMG00000010899	Eif3c	100	77.381	Peromyscus_maniculatus_bairdii
ENSXETG00000002941	eif3c	100	79.135	ENSPCIG00000025206	-	100	79.135	Phascolarctos_cinereus
ENSXETG00000002941	eif3c	100	77.340	ENSPFOG00000004476	eif3c	100	76.809	Poecilia_formosa
ENSXETG00000002941	eif3c	100	74.239	ENSPLAG00000017480	eif3c	100	76.322	Poecilia_latipinna
ENSXETG00000002941	eif3c	100	77.316	ENSPMEG00000019512	eif3c	100	76.677	Poecilia_mexicana
ENSXETG00000002941	eif3c	100	74.267	ENSPREG00000023139	eif3c	72	83.067	Poecilia_reticulata
ENSXETG00000002941	eif3c	100	76.699	ENSPPYG00000007227	-	100	76.134	Pongo_abelii
ENSXETG00000002941	eif3c	66	83.087	ENSPCAG00000012710	-	100	83.087	Procavia_capensis
ENSXETG00000002941	eif3c	100	79.288	ENSPCOG00000019289	-	100	78.726	Propithecus_coquereli
ENSXETG00000002941	eif3c	100	78.641	ENSPVAG00000005804	-	100	78.078	Pteropus_vampyrus
ENSXETG00000002941	eif3c	51	81.212	ENSPNYG00000016530	eif3c	84	83.230	Pundamilia_nyererei
ENSXETG00000002941	eif3c	100	77.336	ENSPNAG00000024040	eif3c	100	77.492	Pygocentrus_nattereri
ENSXETG00000002941	eif3c	100	77.056	ENSRNOG00000018761	Eif3c	100	77.165	Rattus_norvegicus
ENSXETG00000002941	eif3c	96	79.978	ENSRBIG00000044009	-	98	76.087	Rhinopithecus_bieti
ENSXETG00000002941	eif3c	100	78.964	ENSRROG00000043626	-	100	78.294	Rhinopithecus_roxellana
ENSXETG00000002941	eif3c	72	30.824	YMR309C	-	81	30.824	Saccharomyces_cerevisiae
ENSXETG00000002941	eif3c	100	79.310	ENSSBOG00000032155	-	100	78.641	Saimiri_boliviensis_boliviensis
ENSXETG00000002941	eif3c	96	79.306	ENSSHAG00000011808	-	100	79.306	Sarcophilus_harrisii
ENSXETG00000002941	eif3c	100	76.791	ENSSFOG00015021823	eif3c	100	75.560	Scleropages_formosus
ENSXETG00000002941	eif3c	97	78.372	ENSSMAG00000016638	eif3c	97	78.484	Scophthalmus_maximus
ENSXETG00000002941	eif3c	100	77.447	ENSSDUG00000023117	eif3c	98	83.520	Seriola_dumerili
ENSXETG00000002941	eif3c	100	77.234	ENSSLDG00000009706	eif3c	94	84.194	Seriola_lalandi_dorsalis
ENSXETG00000002941	eif3c	100	80.844	ENSSPUG00000016470	-	100	80.303	Sphenodon_punctatus
ENSXETG00000002941	eif3c	100	77.361	ENSSPAG00000000426	eif3c	100	78.065	Stegastes_partitus
ENSXETG00000002941	eif3c	100	78.510	ENSSSCG00000034927	-	100	78.402	Sus_scrofa
ENSXETG00000002941	eif3c	99	76.206	ENSTRUG00000008951	eif3c	99	75.880	Takifugu_rubripes
ENSXETG00000002941	eif3c	100	75.322	ENSTNIG00000015210	eif3c	100	75.589	Tetraodon_nigroviridis
ENSXETG00000002941	eif3c	100	79.050	ENSTTRG00000005880	-	100	78.942	Tursiops_truncatus
ENSXETG00000002941	eif3c	72	80.689	ENSUAMG00000001127	-	91	89.809	Ursus_americanus
ENSXETG00000002941	eif3c	100	79.288	ENSUMAG00000010927	-	100	78.726	Ursus_maritimus
ENSXETG00000002941	eif3c	100	77.778	ENSVVUG00000025970	-	100	77.214	Vulpes_vulpes
ENSXETG00000002941	eif3c	100	77.754	ENSXMAG00000013796	eif3c	100	77.112	Xiphophorus_maculatus