EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000002955 (Gene tree)
Gene ID: -
Gene Symbol: polr2d
Alias: -
Full Name: polymerase (RNA) II (DNA directed) polypeptide D
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6159 bases
Position: chrGL172860.1:1254667-1260825
Accession: XB-GENE-1004238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006449	RNA_pol_Rpb4	PF03874.16	6.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006449	-	927	-	ENSXETP00000006449	142 (aa)	-	B3DL15

Gene Model

Click here to download ENSXETG00000002955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000002955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000002955	polr2d	100	90.845	ENSG00000144231	POLR2D	100	95.192	Homo_sapiens
ENSXETG00000002955	polr2d	100	88.889	ENSAPOG00000023553	polr2d	100	88.889	Acanthochromis_polyacanthus
ENSXETG00000002955	polr2d	100	89.583	ENSAMEG00000011746	POLR2D	100	89.583	Ailuropoda_melanoleuca
ENSXETG00000002955	polr2d	100	88.889	ENSAOCG00000007295	polr2d	100	88.889	Amphiprion_ocellaris
ENSXETG00000002955	polr2d	100	88.889	ENSAPEG00000018714	polr2d	100	88.889	Amphiprion_percula
ENSXETG00000002955	polr2d	100	88.194	ENSATEG00000020416	polr2d	100	88.194	Anabas_testudineus
ENSXETG00000002955	polr2d	100	90.845	ENSACAG00000005255	POLR2D	100	90.845	Anolis_carolinensis
ENSXETG00000002955	polr2d	100	90.845	ENSANAG00000019959	POLR2D	100	90.845	Aotus_nancymaae
ENSXETG00000002955	polr2d	100	89.583	ENSACLG00000009919	polr2d	100	70.139	Astatotilapia_calliptera
ENSXETG00000002955	polr2d	93	93.182	ENSAMXG00000008954	polr2d	100	90.210	Astyanax_mexicanus
ENSXETG00000002955	polr2d	100	91.549	ENSBTAG00000053244	POLR2D	100	91.549	Bos_taurus
ENSXETG00000002955	polr2d	99	57.042	WBGene00018391	rpb-4	99	57.042	Caenorhabditis_elegans
ENSXETG00000002955	polr2d	100	90.141	ENSCJAG00000021814	-	100	90.141	Callithrix_jacchus
ENSXETG00000002955	polr2d	100	90.845	ENSCJAG00000042216	-	100	90.845	Callithrix_jacchus
ENSXETG00000002955	polr2d	100	90.845	ENSCAFG00000004311	POLR2D	100	90.845	Canis_familiaris
ENSXETG00000002955	polr2d	100	90.845	ENSCAFG00020003617	POLR2D	100	90.845	Canis_lupus_dingo
ENSXETG00000002955	polr2d	100	91.549	ENSCHIG00000025995	POLR2D	100	91.549	Capra_hircus
ENSXETG00000002955	polr2d	82	94.017	ENSTSYG00000036021	POLR2D	100	94.017	Carlito_syrichta
ENSXETG00000002955	polr2d	100	90.141	ENSCPOG00000002571	POLR2D	100	90.141	Cavia_porcellus
ENSXETG00000002955	polr2d	100	90.845	ENSCCAG00000037709	POLR2D	100	90.845	Cebus_capucinus
ENSXETG00000002955	polr2d	100	90.845	ENSCATG00000036749	POLR2D	100	90.845	Cercocebus_atys
ENSXETG00000002955	polr2d	100	90.141	ENSCLAG00000004449	POLR2D	100	90.141	Chinchilla_lanigera
ENSXETG00000002955	polr2d	100	90.845	ENSCSAG00000016861	POLR2D	100	90.845	Chlorocebus_sabaeus
ENSXETG00000002955	polr2d	82	94.872	ENSCHOG00000013850	POLR2D	100	94.872	Choloepus_hoffmanni
ENSXETG00000002955	polr2d	100	92.254	ENSCPBG00000019132	POLR2D	51	92.254	Chrysemys_picta_bellii
ENSXETG00000002955	polr2d	90	85.156	ENSCING00000011474	-	96	85.156	Ciona_intestinalis
ENSXETG00000002955	polr2d	99	77.083	ENSCSAVG00000008353	-	99	77.083	Ciona_savignyi
ENSXETG00000002955	polr2d	100	90.845	ENSCANG00000043665	POLR2D	100	90.845	Colobus_angolensis_palliatus
ENSXETG00000002955	polr2d	100	90.845	ENSCGRG00001013608	Polr2d	100	90.845	Cricetulus_griseus_chok1gshd
ENSXETG00000002955	polr2d	82	94.872	ENSCGRG00000012624	Polr2d	100	94.872	Cricetulus_griseus_crigri
ENSXETG00000002955	polr2d	100	88.889	ENSCSEG00000006147	polr2d	100	88.889	Cynoglossus_semilaevis
ENSXETG00000002955	polr2d	100	87.500	ENSCVAG00000000779	polr2d	100	87.500	Cyprinodon_variegatus
ENSXETG00000002955	polr2d	100	90.141	ENSDARG00000076509	polr2d	100	90.141	Danio_rerio
ENSXETG00000002955	polr2d	100	90.845	ENSDNOG00000008527	POLR2D	100	90.845	Dasypus_novemcinctus
ENSXETG00000002955	polr2d	100	90.845	ENSDORG00000026897	Polr2d	100	90.845	Dipodomys_ordii
ENSXETG00000002955	polr2d	91	76.744	FBgn0263757	Rpb4	93	76.744	Drosophila_melanogaster
ENSXETG00000002955	polr2d	100	90.141	ENSEBUG00000007675	polr2d	100	90.141	Eptatretus_burgeri
ENSXETG00000002955	polr2d	100	91.549	ENSEASG00005007103	POLR2D	100	91.549	Equus_asinus_asinus
ENSXETG00000002955	polr2d	100	90.845	ENSECAG00000000556	POLR2D	100	90.845	Equus_caballus
ENSXETG00000002955	polr2d	100	88.811	ENSELUG00000005928	polr2d	100	88.811	Esox_lucius
ENSXETG00000002955	polr2d	100	90.845	ENSFCAG00000027816	POLR2D	100	90.845	Felis_catus
ENSXETG00000002955	polr2d	100	90.845	ENSFALG00000003528	POLR2D	100	90.845	Ficedula_albicollis
ENSXETG00000002955	polr2d	100	89.437	ENSFDAG00000007217	POLR2D	100	89.437	Fukomys_damarensis
ENSXETG00000002955	polr2d	100	90.210	ENSGMOG00000001823	polr2d	99	90.210	Gadus_morhua
ENSXETG00000002955	polr2d	100	90.845	ENSGALG00000002057	POLR2D	100	90.845	Gallus_gallus
ENSXETG00000002955	polr2d	100	88.194	ENSGAFG00000016932	polr2d	71	88.194	Gambusia_affinis
ENSXETG00000002955	polr2d	100	89.583	ENSGACG00000004639	polr2d	100	89.583	Gasterosteus_aculeatus
ENSXETG00000002955	polr2d	100	91.549	ENSGAGG00000021308	POLR2D	100	91.549	Gopherus_agassizii
ENSXETG00000002955	polr2d	100	90.845	ENSGGOG00000004723	POLR2D	100	90.845	Gorilla_gorilla
ENSXETG00000002955	polr2d	100	90.141	ENSHGLG00000016570	Polr2d	100	90.141	Heterocephalus_glaber_female
ENSXETG00000002955	polr2d	100	90.141	ENSHGLG00100013785	Polr2d	100	90.141	Heterocephalus_glaber_male
ENSXETG00000002955	polr2d	100	85.915	ENSHCOG00000006425	polr2d	100	85.915	Hippocampus_comes
ENSXETG00000002955	polr2d	100	90.141	ENSIPUG00000011192	polr2d	100	90.141	Ictalurus_punctatus
ENSXETG00000002955	polr2d	100	88.732	ENSSTOG00000023329	POLR2D	100	88.732	Ictidomys_tridecemlineatus
ENSXETG00000002955	polr2d	100	83.099	ENSJJAG00000000783	-	100	83.099	Jaculus_jaculus
ENSXETG00000002955	polr2d	100	90.845	ENSJJAG00000015053	-	100	90.845	Jaculus_jaculus
ENSXETG00000002955	polr2d	82	88.889	ENSJJAG00000005723	-	94	88.889	Jaculus_jaculus
ENSXETG00000002955	polr2d	85	90.909	ENSKMAG00000010677	polr2d	68	90.164	Kryptolebias_marmoratus
ENSXETG00000002955	polr2d	100	91.549	ENSLACG00000017253	POLR2D	100	91.549	Latimeria_chalumnae
ENSXETG00000002955	polr2d	100	90.278	ENSLOCG00000009106	polr2d	100	90.278	Lepisosteus_oculatus
ENSXETG00000002955	polr2d	100	90.845	ENSLAFG00000001848	POLR2D	100	90.845	Loxodonta_africana
ENSXETG00000002955	polr2d	100	90.845	ENSMFAG00000031937	POLR2D	100	90.845	Macaca_fascicularis
ENSXETG00000002955	polr2d	100	90.845	ENSMMUG00000001989	POLR2D	100	90.845	Macaca_mulatta
ENSXETG00000002955	polr2d	100	90.845	ENSMNEG00000035505	POLR2D	100	90.845	Macaca_nemestrina
ENSXETG00000002955	polr2d	100	90.845	ENSMLEG00000035827	POLR2D	100	90.845	Mandrillus_leucophaeus
ENSXETG00000002955	polr2d	100	90.845	ENSMGAG00000001248	POLR2D	100	90.845	Meleagris_gallopavo
ENSXETG00000002955	polr2d	100	90.141	ENSMAUG00000014518	Polr2d	100	90.141	Mesocricetus_auratus
ENSXETG00000002955	polr2d	100	90.141	ENSMICG00000009931	POLR2D	100	90.141	Microcebus_murinus
ENSXETG00000002955	polr2d	100	88.028	ENSMOCG00000019367	Polr2d	100	88.028	Microtus_ochrogaster
ENSXETG00000002955	polr2d	100	76.056	ENSMODG00000025030	-	100	76.056	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025031	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	74.648	ENSMODG00000025032	-	100	74.648	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025033	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025034	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025035	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025036	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	75.352	ENSMODG00000025029	-	100	75.352	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	76.056	ENSMODG00000025028	-	100	76.056	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	76.056	ENSMODG00000025027	-	100	76.056	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	76.056	ENSMODG00000025026	-	100	76.056	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	91.549	ENSMODG00000018653	-	100	91.549	Monodelphis_domestica
ENSXETG00000002955	polr2d	100	88.889	ENSMALG00000018266	polr2d	100	88.889	Monopterus_albus
ENSXETG00000002955	polr2d	100	90.845	MGP_CAROLIEiJ_G0022066	Polr2d	100	90.845	Mus_caroli
ENSXETG00000002955	polr2d	100	90.845	ENSMUSG00000024258	Polr2d	100	90.845	Mus_musculus
ENSXETG00000002955	polr2d	100	90.845	MGP_PahariEiJ_G0018800	Polr2d	100	90.845	Mus_pahari
ENSXETG00000002955	polr2d	100	90.845	MGP_SPRETEiJ_G0022977	Polr2d	100	90.845	Mus_spretus
ENSXETG00000002955	polr2d	100	90.845	ENSMPUG00000016685	POLR2D	100	90.845	Mustela_putorius_furo
ENSXETG00000002955	polr2d	83	94.915	ENSMLUG00000006862	POLR2D	100	94.915	Myotis_lucifugus
ENSXETG00000002955	polr2d	100	90.845	ENSNGAG00000014862	Polr2d	100	90.845	Nannospalax_galili
ENSXETG00000002955	polr2d	100	90.845	ENSNLEG00000027191	POLR2D	100	90.845	Nomascus_leucogenys
ENSXETG00000002955	polr2d	82	94.017	ENSOPRG00000005327	POLR2D	100	94.017	Ochotona_princeps
ENSXETG00000002955	polr2d	100	90.141	ENSODEG00000005262	POLR2D	100	90.141	Octodon_degus
ENSXETG00000002955	polr2d	100	89.583	ENSONIG00000017290	polr2d	100	89.583	Oreochromis_niloticus
ENSXETG00000002955	polr2d	83	95.763	ENSOANG00000013216	POLR2D	100	95.763	Ornithorhynchus_anatinus
ENSXETG00000002955	polr2d	100	88.732	ENSOCUG00000023403	-	100	88.732	Oryctolagus_cuniculus
ENSXETG00000002955	polr2d	100	84.615	ENSOCUG00000021449	-	100	84.615	Oryctolagus_cuniculus
ENSXETG00000002955	polr2d	100	86.111	ENSORLG00000005266	polr2d	100	86.111	Oryzias_latipes
ENSXETG00000002955	polr2d	100	86.111	ENSORLG00020006647	polr2d	100	86.111	Oryzias_latipes_hni
ENSXETG00000002955	polr2d	100	86.111	ENSORLG00015003222	polr2d	100	86.111	Oryzias_latipes_hsok
ENSXETG00000002955	polr2d	100	86.806	ENSOMEG00000018915	polr2d	100	86.806	Oryzias_melastigma
ENSXETG00000002955	polr2d	100	88.889	ENSOGAG00000017118	POLR2D	100	88.889	Otolemur_garnettii
ENSXETG00000002955	polr2d	100	91.549	ENSOARG00000015995	POLR2D	100	91.549	Ovis_aries
ENSXETG00000002955	polr2d	100	90.845	ENSPPRG00000020222	POLR2D	100	90.845	Panthera_pardus
ENSXETG00000002955	polr2d	100	90.845	ENSPTIG00000018618	POLR2D	100	90.845	Panthera_tigris_altaica
ENSXETG00000002955	polr2d	100	90.845	ENSPTRG00000012436	POLR2D	100	90.845	Pan_troglodytes
ENSXETG00000002955	polr2d	100	90.845	ENSPANG00000018602	POLR2D	100	90.845	Papio_anubis
ENSXETG00000002955	polr2d	100	89.583	ENSPKIG00000012166	polr2d	100	89.583	Paramormyrops_kingsleyae
ENSXETG00000002955	polr2d	83	95.763	ENSPSIG00000002873	POLR2D	100	95.763	Pelodiscus_sinensis
ENSXETG00000002955	polr2d	100	90.845	ENSPEMG00000018244	Polr2d	100	90.845	Peromyscus_maniculatus_bairdii
ENSXETG00000002955	polr2d	100	85.915	ENSPMAG00000005021	polr2d	99	85.915	Petromyzon_marinus
ENSXETG00000002955	polr2d	100	88.194	ENSPFOG00000008969	polr2d	100	88.194	Poecilia_formosa
ENSXETG00000002955	polr2d	100	88.194	ENSPLAG00000017210	polr2d	100	88.194	Poecilia_latipinna
ENSXETG00000002955	polr2d	100	88.194	ENSPMEG00000005160	polr2d	100	88.194	Poecilia_mexicana
ENSXETG00000002955	polr2d	73	92.308	ENSPREG00000021862	polr2d	100	92.308	Poecilia_reticulata
ENSXETG00000002955	polr2d	100	90.845	ENSPPYG00000012759	POLR2D	100	90.845	Pongo_abelii
ENSXETG00000002955	polr2d	100	90.845	ENSPCAG00000001396	POLR2D	100	90.845	Procavia_capensis
ENSXETG00000002955	polr2d	100	90.141	ENSPCOG00000022076	POLR2D	100	90.141	Propithecus_coquereli
ENSXETG00000002955	polr2d	100	90.845	ENSPVAG00000004002	POLR2D	100	90.845	Pteropus_vampyrus
ENSXETG00000002955	polr2d	100	90.210	ENSPNAG00000018246	polr2d	100	90.210	Pygocentrus_nattereri
ENSXETG00000002955	polr2d	100	90.845	ENSRNOG00000016231	Polr2d	100	90.845	Rattus_norvegicus
ENSXETG00000002955	polr2d	100	90.845	ENSRBIG00000039326	POLR2D	100	90.845	Rhinopithecus_bieti
ENSXETG00000002955	polr2d	100	90.845	ENSRROG00000023289	POLR2D	100	90.845	Rhinopithecus_roxellana
ENSXETG00000002955	polr2d	100	90.845	ENSSHAG00000014817	-	100	90.845	Sarcophilus_harrisii
ENSXETG00000002955	polr2d	92	93.893	ENSSFOG00015024204	polr2d	100	89.583	Scleropages_formosus
ENSXETG00000002955	polr2d	100	90.278	ENSSDUG00000006060	polr2d	100	90.278	Seriola_dumerili
ENSXETG00000002955	polr2d	94	92.537	ENSSLDG00000024485	polr2d	100	89.655	Seriola_lalandi_dorsalis
ENSXETG00000002955	polr2d	82	94.017	ENSSARG00000009037	POLR2D	100	94.017	Sorex_araneus
ENSXETG00000002955	polr2d	100	90.845	ENSSPUG00000014915	POLR2D	100	90.845	Sphenodon_punctatus
ENSXETG00000002955	polr2d	100	89.583	ENSSPAG00000013386	polr2d	100	89.583	Stegastes_partitus
ENSXETG00000002955	polr2d	100	90.845	ENSSSCG00000039230	POLR2D	100	90.845	Sus_scrofa
ENSXETG00000002955	polr2d	100	90.845	ENSTGUG00000005773	POLR2D	99	90.845	Taeniopygia_guttata
ENSXETG00000002955	polr2d	100	88.732	ENSTRUG00000004740	polr2d	100	88.732	Takifugu_rubripes
ENSXETG00000002955	polr2d	100	88.732	ENSTNIG00000011210	polr2d	100	88.732	Tetraodon_nigroviridis
ENSXETG00000002955	polr2d	82	94.872	ENSTBEG00000006081	POLR2D	100	94.872	Tupaia_belangeri
ENSXETG00000002955	polr2d	82	94.872	ENSTTRG00000010055	POLR2D	100	94.872	Tursiops_truncatus
ENSXETG00000002955	polr2d	91	94.574	ENSUAMG00000024374	POLR2D	98	94.574	Ursus_americanus
ENSXETG00000002955	polr2d	85	94.167	ENSUMAG00000008280	POLR2D	100	95.192	Ursus_maritimus
ENSXETG00000002955	polr2d	82	94.872	ENSVPAG00000007239	POLR2D	100	94.872	Vicugna_pacos
ENSXETG00000002955	polr2d	100	90.845	ENSVVUG00000008616	POLR2D	100	90.845	Vulpes_vulpes
ENSXETG00000002955	polr2d	73	92.308	ENSXCOG00000012668	polr2d	100	92.308	Xiphophorus_couchianus
ENSXETG00000002955	polr2d	73	92.308	ENSXMAG00000014031	polr2d	100	92.308	Xiphophorus_maculatus