EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000003036 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 20861 bases
Position: chrGL173323.1:289315-310175
Accession: XB-GENE-6046089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000006596	tRNA-synt_1g	PF09334.11	2.6e-15	1	1
ENSXETP00000006596	Anticodon_1	PF08264.13	1.9e-32	1	1
ENSXETP00000006596	tRNA-synt_1	PF00133.22	2.8e-171	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000006596	-	2886	-	ENSXETP00000006596	962 (aa)	-	F7EBD8

Gene Model

Click here to download ENSXETG00000003036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000003036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000003036	vars2	98	46.562	ENSXETG00000024076	vars	76	46.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000003036	vars2	98	53.051	ENSAPOG00000007396	vars2	88	53.051	Acanthochromis_polyacanthus
ENSXETG00000003036	vars2	99	55.198	ENSAMEG00000012997	VARS2	87	55.198	Ailuropoda_melanoleuca
ENSXETG00000003036	vars2	93	55.150	ENSACIG00000004344	vars2	84	55.150	Amphilophus_citrinellus
ENSXETG00000003036	vars2	98	52.637	ENSAOCG00000000476	vars2	88	52.637	Amphiprion_ocellaris
ENSXETG00000003036	vars2	98	52.637	ENSAPEG00000008646	vars2	86	52.637	Amphiprion_percula
ENSXETG00000003036	vars2	98	53.542	ENSATEG00000012291	vars2	88	53.542	Anabas_testudineus
ENSXETG00000003036	vars2	99	56.933	ENSACAG00000022093	VARS2	87	56.933	Anolis_carolinensis
ENSXETG00000003036	vars2	99	54.517	ENSANAG00000038018	VARS2	89	54.517	Aotus_nancymaae
ENSXETG00000003036	vars2	98	52.583	ENSACLG00000018673	vars2	89	52.583	Astatotilapia_calliptera
ENSXETG00000003036	vars2	94	55.470	ENSAMXG00000017773	vars2	88	55.470	Astyanax_mexicanus
ENSXETG00000003036	vars2	99	54.879	ENSBTAG00000010698	VARS2	88	54.774	Bos_taurus
ENSXETG00000003036	vars2	99	54.517	ENSCJAG00000019826	VARS2	89	54.517	Callithrix_jacchus
ENSXETG00000003036	vars2	99	55.301	ENSCAFG00000000454	VARS2	89	55.301	Canis_familiaris
ENSXETG00000003036	vars2	96	54.565	ENSCAFG00020019387	VARS2	89	57.375	Canis_lupus_dingo
ENSXETG00000003036	vars2	99	54.621	ENSCHIG00000007847	VARS2	89	54.621	Capra_hircus
ENSXETG00000003036	vars2	99	55.348	ENSTSYG00000009904	VARS2	89	55.348	Carlito_syrichta
ENSXETG00000003036	vars2	94	53.846	ENSCAPG00000017770	VARS2	96	53.846	Cavia_aperea
ENSXETG00000003036	vars2	99	54.933	ENSCPOG00000021834	VARS2	89	55.036	Cavia_porcellus
ENSXETG00000003036	vars2	99	54.621	ENSCCAG00000037907	VARS2	89	54.621	Cebus_capucinus
ENSXETG00000003036	vars2	100	54.922	ENSCATG00000032554	VARS2	89	54.922	Cercocebus_atys
ENSXETG00000003036	vars2	99	54.927	ENSCLAG00000002889	VARS2	89	54.517	Chinchilla_lanigera
ENSXETG00000003036	vars2	100	54.922	ENSCSAG00000008327	VARS2	89	54.922	Chlorocebus_sabaeus
ENSXETG00000003036	vars2	99	57.487	ENSCPBG00000021502	VARS2	93	57.487	Chrysemys_picta_bellii
ENSXETG00000003036	vars2	100	54.508	ENSCANG00000014991	VARS2	89	54.508	Colobus_angolensis_palliatus
ENSXETG00000003036	vars2	99	55.047	ENSCGRG00001021535	Vars2	89	55.047	Cricetulus_griseus_chok1gshd
ENSXETG00000003036	vars2	99	55.047	ENSCGRG00000014112	Vars2	89	55.047	Cricetulus_griseus_crigri
ENSXETG00000003036	vars2	98	50.530	ENSCSEG00000015432	vars2	86	55.584	Cynoglossus_semilaevis
ENSXETG00000003036	vars2	69	53.744	ENSCVAG00000017765	vars2	93	53.744	Cyprinodon_variegatus
ENSXETG00000003036	vars2	93	54.928	ENSDARG00000056717	vars2	84	54.928	Danio_rerio
ENSXETG00000003036	vars2	85	50.242	ENSDORG00000008516	Vars2	90	50.242	Dipodomys_ordii
ENSXETG00000003036	vars2	98	49.789	ENSETEG00000014844	VARS2	88	49.633	Echinops_telfairi
ENSXETG00000003036	vars2	99	54.102	ENSEASG00005019997	VARS2	94	54.137	Equus_asinus_asinus
ENSXETG00000003036	vars2	99	54.725	ENSECAG00000018202	VARS2	89	54.725	Equus_caballus
ENSXETG00000003036	vars2	65	47.519	ENSEEUG00000012591	-	58	47.519	Erinaceus_europaeus
ENSXETG00000003036	vars2	98	52.053	ENSELUG00000017824	vars2	88	52.053	Esox_lucius
ENSXETG00000003036	vars2	99	55.659	ENSFCAG00000010531	VARS2	89	55.659	Felis_catus
ENSXETG00000003036	vars2	99	54.725	ENSFDAG00000017216	VARS2	89	54.725	Fukomys_damarensis
ENSXETG00000003036	vars2	93	52.232	ENSFHEG00000013932	vars2	87	52.232	Fundulus_heteroclitus
ENSXETG00000003036	vars2	99	51.515	ENSGMOG00000018960	vars2	98	51.515	Gadus_morhua
ENSXETG00000003036	vars2	86	50.065	ENSGAFG00000004737	vars2	88	50.065	Gambusia_affinis
ENSXETG00000003036	vars2	98	53.919	ENSGACG00000001464	vars2	95	53.797	Gasterosteus_aculeatus
ENSXETG00000003036	vars2	97	58.591	ENSGAGG00000011652	VARS2	94	58.591	Gopherus_agassizii
ENSXETG00000003036	vars2	100	54.301	ENSGGOG00000014587	VARS2	89	54.301	Gorilla_gorilla
ENSXETG00000003036	vars2	91	54.097	ENSHBUG00000002448	vars2	84	54.097	Haplochromis_burtoni
ENSXETG00000003036	vars2	99	54.262	ENSHGLG00000012886	VARS2	86	54.366	Heterocephalus_glaber_female
ENSXETG00000003036	vars2	99	54.158	ENSHGLG00100016535	VARS2	89	54.262	Heterocephalus_glaber_male
ENSXETG00000003036	vars2	72	52.557	ENSHCOG00000017907	vars2	93	52.557	Hippocampus_comes
ENSXETG00000003036	vars2	93	55.727	ENSIPUG00000015573	Vars2	84	55.727	Ictalurus_punctatus
ENSXETG00000003036	vars2	99	55.348	ENSSTOG00000009924	VARS2	89	55.348	Ictidomys_tridecemlineatus
ENSXETG00000003036	vars2	99	53.894	ENSJJAG00000011144	Vars2	89	53.894	Jaculus_jaculus
ENSXETG00000003036	vars2	99	52.249	ENSKMAG00000001393	vars2	88	52.249	Kryptolebias_marmoratus
ENSXETG00000003036	vars2	58	61.041	ENSLBEG00000005480	-	81	61.041	Labrus_bergylta
ENSXETG00000003036	vars2	97	51.420	ENSLBEG00000011949	vars2	87	51.420	Labrus_bergylta
ENSXETG00000003036	vars2	96	54.189	ENSLACG00000001576	-	94	53.415	Latimeria_chalumnae
ENSXETG00000003036	vars2	99	54.984	ENSLAFG00000015183	VARS2	89	54.984	Loxodonta_africana
ENSXETG00000003036	vars2	100	54.611	ENSMFAG00000042367	VARS2	89	54.611	Macaca_fascicularis
ENSXETG00000003036	vars2	100	54.715	ENSMMUG00000018609	VARS2	89	54.715	Macaca_mulatta
ENSXETG00000003036	vars2	100	54.819	ENSMNEG00000043163	VARS2	89	54.819	Macaca_nemestrina
ENSXETG00000003036	vars2	100	54.819	ENSMLEG00000041728	VARS2	87	54.819	Mandrillus_leucophaeus
ENSXETG00000003036	vars2	99	52.049	ENSMAMG00000020339	vars2	89	52.049	Mastacembelus_armatus
ENSXETG00000003036	vars2	98	52.479	ENSMZEG00005017669	vars2	89	52.479	Maylandia_zebra
ENSXETG00000003036	vars2	99	55.660	ENSMAUG00000018946	Vars2	89	55.660	Mesocricetus_auratus
ENSXETG00000003036	vars2	85	58.151	ENSMICG00000005365	VARS2	91	58.151	Microcebus_murinus
ENSXETG00000003036	vars2	92	58.762	ENSMOCG00000014607	Vars2	88	58.762	Microtus_ochrogaster
ENSXETG00000003036	vars2	96	53.269	ENSMMOG00000012122	vars2	87	53.269	Mola_mola
ENSXETG00000003036	vars2	99	55.198	ENSMODG00000015848	VARS2	88	55.198	Monodelphis_domestica
ENSXETG00000003036	vars2	98	52.197	ENSMALG00000009217	vars2	94	52.197	Monopterus_albus
ENSXETG00000003036	vars2	99	54.774	MGP_CAROLIEiJ_G0021529	Vars2	89	63.000	Mus_caroli
ENSXETG00000003036	vars2	99	54.879	ENSMUSG00000038838	Vars2	89	63.000	Mus_musculus
ENSXETG00000003036	vars2	99	55.079	MGP_PahariEiJ_G0020523	Vars2	89	63.000	Mus_pahari
ENSXETG00000003036	vars2	99	55.089	MGP_SPRETEiJ_G0022436	Vars2	89	63.000	Mus_spretus
ENSXETG00000003036	vars2	99	55.971	ENSMPUG00000011643	VARS2	89	55.971	Mustela_putorius_furo
ENSXETG00000003036	vars2	99	54.603	ENSMLUG00000002356	VARS2	85	54.603	Myotis_lucifugus
ENSXETG00000003036	vars2	98	52.637	ENSNGAG00000020607	Vars2	88	52.637	Nannospalax_galili
ENSXETG00000003036	vars2	71	46.685	ENSNBRG00000001624	vars2	56	46.685	Neolamprologus_brichardi
ENSXETG00000003036	vars2	100	53.782	ENSNLEG00000005625	VARS2	88	53.782	Nomascus_leucogenys
ENSXETG00000003036	vars2	84	53.607	ENSMEUG00000014475	VARS2	85	53.607	Notamacropus_eugenii
ENSXETG00000003036	vars2	88	69.333	ENSOPRG00000000682	VARS2	79	69.333	Ochotona_princeps
ENSXETG00000003036	vars2	99	54.517	ENSODEG00000017965	VARS2	89	54.621	Octodon_degus
ENSXETG00000003036	vars2	93	38.172	ENSONIG00000004734	vars2	89	38.817	Oreochromis_niloticus
ENSXETG00000003036	vars2	79	70.588	ENSOANG00000000398	-	87	48.626	Ornithorhynchus_anatinus
ENSXETG00000003036	vars2	99	50.709	ENSOCUG00000021496	VARS2	58	50.810	Oryctolagus_cuniculus
ENSXETG00000003036	vars2	99	50.769	ENSORLG00000010632	vars2	88	50.769	Oryzias_latipes
ENSXETG00000003036	vars2	99	50.462	ENSORLG00020018584	vars2	88	50.462	Oryzias_latipes_hni
ENSXETG00000003036	vars2	99	49.898	ENSORLG00015010408	vars2	89	49.898	Oryzias_latipes_hsok
ENSXETG00000003036	vars2	98	51.653	ENSOMEG00000008360	vars2	88	51.653	Oryzias_melastigma
ENSXETG00000003036	vars2	99	54.301	ENSOGAG00000006087	VARS2	87	54.301	Otolemur_garnettii
ENSXETG00000003036	vars2	99	54.564	ENSOARG00000010844	VARS2	88	54.564	Ovis_aries
ENSXETG00000003036	vars2	100	54.508	ENSPPAG00000041141	VARS2	89	54.508	Pan_paniscus
ENSXETG00000003036	vars2	99	55.763	ENSPPRG00000006751	VARS2	87	55.763	Panthera_pardus
ENSXETG00000003036	vars2	99	55.867	ENSPTIG00000017799	VARS2	93	55.867	Panthera_tigris_altaica
ENSXETG00000003036	vars2	100	54.508	ENSPTRG00000034497	VARS2	89	54.508	Pan_troglodytes
ENSXETG00000003036	vars2	100	54.819	ENSPANG00000018481	VARS2	92	54.819	Papio_anubis
ENSXETG00000003036	vars2	98	53.312	ENSPKIG00000011372	vars2	88	53.312	Paramormyrops_kingsleyae
ENSXETG00000003036	vars2	66	62.246	ENSPSIG00000006206	VARS2	92	62.096	Pelodiscus_sinensis
ENSXETG00000003036	vars2	98	52.850	ENSPMGG00000000465	vars2	89	52.642	Periophthalmus_magnuspinnatus
ENSXETG00000003036	vars2	99	55.194	ENSPEMG00000014691	Vars2	89	55.194	Peromyscus_maniculatus_bairdii
ENSXETG00000003036	vars2	99	56.649	ENSPCIG00000015040	VARS2	89	56.649	Phascolarctos_cinereus
ENSXETG00000003036	vars2	98	51.402	ENSPFOG00000017616	vars2	88	51.402	Poecilia_formosa
ENSXETG00000003036	vars2	98	51.242	ENSPLAG00000019778	vars2	89	51.242	Poecilia_latipinna
ENSXETG00000003036	vars2	98	51.139	ENSPMEG00000011123	vars2	88	51.139	Poecilia_mexicana
ENSXETG00000003036	vars2	98	45.108	ENSPREG00000014998	vars2	91	45.108	Poecilia_reticulata
ENSXETG00000003036	vars2	100	54.611	ENSPPYG00000016424	VARS2	89	54.611	Pongo_abelii
ENSXETG00000003036	vars2	81	68.000	ENSPCAG00000006946	VARS2	72	68.000	Procavia_capensis
ENSXETG00000003036	vars2	99	54.023	ENSPCOG00000014839	VARS2	86	54.023	Propithecus_coquereli
ENSXETG00000003036	vars2	99	54.517	ENSPVAG00000004197	VARS2	89	54.517	Pteropus_vampyrus
ENSXETG00000003036	vars2	81	57.143	ENSPNYG00000010314	vars2	88	57.143	Pundamilia_nyererei
ENSXETG00000003036	vars2	93	55.312	ENSPNAG00000026793	vars2	83	55.312	Pygocentrus_nattereri
ENSXETG00000003036	vars2	99	54.006	ENSRNOG00000000833	Vars2	89	54.006	Rattus_norvegicus
ENSXETG00000003036	vars2	99	54.782	ENSRBIG00000032725	VARS2	89	54.782	Rhinopithecus_bieti
ENSXETG00000003036	vars2	100	54.715	ENSRROG00000043847	VARS2	89	54.715	Rhinopithecus_roxellana
ENSXETG00000003036	vars2	98	54.321	ENSSBOG00000033240	VARS2	86	54.115	Saimiri_boliviensis_boliviensis
ENSXETG00000003036	vars2	99	56.008	ENSSHAG00000009307	VARS2	89	56.008	Sarcophilus_harrisii
ENSXETG00000003036	vars2	98	53.125	ENSSFOG00015016187	vars2	88	53.125	Scleropages_formosus
ENSXETG00000003036	vars2	87	66.857	ENSSMAG00000020842	vars2	83	66.857	Scophthalmus_maximus
ENSXETG00000003036	vars2	98	52.642	ENSSDUG00000011598	vars2	88	52.642	Seriola_dumerili
ENSXETG00000003036	vars2	97	52.704	ENSSLDG00000015492	vars2	87	52.784	Seriola_lalandi_dorsalis
ENSXETG00000003036	vars2	53	53.619	ENSSARG00000003786	-	57	53.619	Sorex_araneus
ENSXETG00000003036	vars2	98	54.373	ENSSPUG00000014700	VARS2	94	54.478	Sphenodon_punctatus
ENSXETG00000003036	vars2	98	51.204	ENSSPAG00000004654	vars2	88	51.204	Stegastes_partitus
ENSXETG00000003036	vars2	100	55.130	ENSSSCG00000001384	VARS2	92	56.082	Sus_scrofa
ENSXETG00000003036	vars2	99	52.534	ENSTRUG00000005264	vars2	91	52.534	Takifugu_rubripes
ENSXETG00000003036	vars2	90	54.618	ENSTNIG00000005916	vars2	88	51.623	Tetraodon_nigroviridis
ENSXETG00000003036	vars2	86	72.973	ENSTTRG00000012243	VARS2	77	72.973	Tursiops_truncatus
ENSXETG00000003036	vars2	99	55.036	ENSUAMG00000026124	VARS2	96	54.515	Ursus_americanus
ENSXETG00000003036	vars2	99	55.198	ENSUMAG00000019894	VARS2	89	55.198	Ursus_maritimus
ENSXETG00000003036	vars2	99	55.301	ENSVVUG00000010754	VARS2	85	55.301	Vulpes_vulpes
ENSXETG00000003036	vars2	100	52.103	ENSXCOG00000003455	vars2	93	52.103	Xiphophorus_couchianus
ENSXETG00000003036	vars2	100	51.515	ENSXMAG00000013523	vars2	90	51.515	Xiphophorus_maculatus